All content

Search filter terms
Filter by category
Filter by type
Filter by tag
Filter by user
Filter by licence
Filter by wsdl
Results per page:
Sort by:
Showing 9 results. Use the filters on the left and the search box below to refine the results.
Category: Workflow Type: Taverna 2 Tag: sbml Licence: by-sa
Uploader

Workflow Copasi time simulation of SBML model (1)

Thumb
Uses the synchronous Copasi time simulation web service to predict the concentrations of species over a time period. The results from Copasi are provided in SBRML format which is visualised as a graph using an R script.

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow SBML model optimisation (1)

Thumb
This workflow modifies reaction kinetic parameters against experimental data stored in the MCISB key results database

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow SBML model parameterisation (1)

Thumb
This workflow parameterises an SBML model generated by the qualitative SBML model construction workflow

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow Construction of skeleton SBML model using ... (1)

Thumb
This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given subsystem term.

Created: 2010-03-26 | Last updated: 2010-03-26

Credits: User Peter Li

Uploader

Workflow Construction of skeleton SBML model using ... (1)

Thumb
This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given list of yeast enzymes ORF numbers

Created: 2010-03-26 | Last updated: 2010-03-26

Credits: User Peter Li

Uploader

Workflow Probabilistic Model Checking (PMC): comput... (1)

Thumb
Exemplary experiment using Tav4SB (http://bioputer.mimuw.edu.pl/tav4sb/) PRISM model translation and model checking Web service operations.

Created: 2011-07-20 | Last updated: 2011-07-20

Credits: User trybik

Uploader

Workflow Simulate SBML-derived ODEs (2)

Thumb
Exemplary experiment using Tav4SB (http://bioputer.mimuw.edu.pl/tav4sb/) ODEs simulation and plotting Web service operations.

Created: 2011-07-20 | Last updated: 2011-07-20

Credits: User trybik

Uploader

Workflow Multi-parameter sensitivity analysis (MPSA... (2)

Thumb
Exemplary multi-parameter sensitivity analysis (MPSA) experiment using Tav4SB (http://bioputer.mimuw.edu.pl/tav4sb/) WS operations. In this version of MPSA PRISM probabilistic model checking is basis of analysis of SBML model parameters space.

Created: 2011-07-14 | Last updated: 2011-07-21

Credits: User trybik

Uploader

Workflow Multi-parameter sensitivity analysis (MPSA) (2)

Thumb
Exemplary multi-parameter sensitivity analysis (MPSA) experiment using Tav4SB (http://bioputer.mimuw.edu.pl/tav4sb/) WS operations. In this version of MPSA, ODEs simulations are basis of analysis of SBML model parameters space.

Created: 2011-07-14 | Last updated: 2011-07-21

Credits: User trybik

Results per page:
Sort by: