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Tag: ebi

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Hamish McWilliam

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EMBL-EBI Web Services (retired)

Created: 2008-07-11 01:24:33 | Last updated: 2013-03-28 12:39:25

The European Bioinformatics Institiute offers a wide range of services covering may biological and bioinformatics domains. This Pack collates a set of workflows that provide wrappers for web services developed, and maintained by the EMBL-EBI.NB: the Web Services used in this package have been decommissioned and are no longer available.

17 items in this pack

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Taverna 2

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Hamish McWilliam

NCBI BLAST (SOAP) (1)

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Perform a BLAST search using the EMBL-EBIâ€™s NCBI BLAST (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/sss/ncbi_blast_soap). The query sequence, database to search and BLAST program to use are inputs, the other parameters for the search are allowed to default.

Created: 2010-11-29 | Last updated: 2013-03-28

Attributions: EBI_NCBI_BLAST NCBI BLAST (SOAP)

Taverna 2

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Hamish McWilliam

EMBL-EBI ClustalW2 (SOAP) (1)

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Perform a ClustalW2 alignment using the EMBL-EBIâ€™s ClustalW2 (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/msa/clustalw2_soap).

Created: 2010-12-06 | Last updated: 2013-03-28

Attributions: EBI_ClustalW2

Taverna 1

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Hamish McWilliam

InterProScan (SOAP) (1)

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Perform an InterProScan search using the EMBL-EBIâ€™s InterProScan (SOAP) service (see http://www.ebi.ac.uk/Tools/webservices/services/pfa/iprscan_soap). The query sequence to use is the input, the other parameters for the search are allowed to default.