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Tag: systems_biology User: Peter Li
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Workflow Copasi time simulation of SBML model (1)

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Uses the synchronous Copasi time simulation web service to predict the concentrations of species over a time period. The results from Copasi are provided in SBRML format which is visualised as a graph using an R script.

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow SBML model optimisation (1)

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This workflow modifies reaction kinetic parameters against experimental data stored in the MCISB key results database

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow SBML model parameterisation (1)

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This workflow parameterises an SBML model generated by the qualitative SBML model construction workflow

Created: 2010-03-26

Credits: User Peter Li

Uploader

Workflow Construction of skeleton SBML model using ... (1)

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This workflow generates a skeleton SBML model consisting of the metabolic reactions for a given subsystem term.

Created: 2010-03-26 | Last updated: 2010-03-26

Credits: User Peter Li

Creator

Pack Systematic integration of experimental data and mode...


Created: 2010-03-25 20:31:36 | Last updated: 2010-03-26 17:23:44

 A pack of workflows for the construction, parameterisation, optimisation and simulation of SBML models.

5 items in this pack

Comments: 0 | Viewed: 65 times | Downloaded: 0 times

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