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Tag: r

Workflow Increment an integer (1)

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This workflow uses R to increment the input integer

Created: 2014-10-03

Credits: User Alan Williams

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Workflow Print R expression (3)

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This is a very small nested workflow to convert an R expression to the same textual representation that you see displayed when using the R command line.

Created: 2013-09-05 | Last updated: 2013-10-16

Credits: User Jon Giddy

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Workflow Convert Taverna list of RExpr to R list - v2 (2)

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This workflow accepts a Taverna list of arbitrary R expressions and returns a single R expression representing an R list containing the original expressions. This workflow relies on the current Taverna behaviour of an R expression being represented by a list of strings containing the deparsed expression. If this changes, this workflow will likely break. The first BeanShell converts each R expression (actually a list of strings) to a single string. This uses implicit iteration to do this for...

Created: 2013-09-04 | Last updated: 2013-10-14

Credits: User Jon Giddy Network-member BioVeL

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Workflow Elevation plot v.2 (2)

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Functionally identical to the original. I tried to upload a version with annotation, but somehow the notes didn't make it to myExperiment. From the prior verion: This workflow accepts city and country names as user-supplied input. These value are supplied to the GetWeather webservice (http://www.webservicex.net/globalweather.asmx?WSDL), which returns an XML record of location and weather info for each recognized city. (See the uploaded photo "weather example") The XML returned fr...

Created: 2011-10-06 | Last updated: 2011-10-06

Credits: User Chrisser

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Blob "Elevation plot..." example output

Created: 2011-10-06 03:32:17 | Last updated: 2011-10-06 03:32:19

Credits: User Chrisser

License: Creative Commons Attribution 3.0 Unported License

This screenshot shows what output of the "Elevation plot..." workflow looks like. img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; } .cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; } .cubbies-selected:active{ box-shadow: 2px 2px 5px -1px darkb...

File type: JPEG image

Comments: 0 | Viewed: 36 times | Downloaded: 24 times

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Blob Workflow compact

Created: 2011-10-06 03:27:24 | Last updated: 2011-10-06 03:27:29

Credits: User Chrisser

License: Creative Commons Attribution 3.0 Unported License

This screenshot shows the "Elevation plot..." workflow with the nested workflows compact. img, #cubbies-overlay{ -moz-transition-property: margin, box-shadow, z-index; -moz-transition-duration: 0.1s; -webkit-transition-property: margin, box-shadow, z-index; -webkit-transition-duration: 0.1s; } .cubbies-selected{ z-index: 9999; box-shadow: 3px 3px 8px -1px blue !important; cursor: pointer !important; margin: -3px 3px 3px -3px; } .cubbies-selected:active{ box-shadow: 2px 2px 5px -1...

File type: JPEG image

Comments: 0 | Viewed: 50 times | Downloaded: 33 times

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Pack Find elevation given city and country names


Created: 2011-10-06 03:06:32 | Last updated: 2011-10-06 04:15:33

This pack contains the workflows and supplemental files that I created for a project in IST600 - eScience and eResearch Workflows. This workflow accepts city and country names as user-supplied input. These value are supplied to the GetWeather webservice (http://www.webservicex.net/globalweather.asmx?WSDL), which returns an XML record of location and weather info for each recognized city. (See the uploaded photo "weather example") The XML returned from GetWeather is then searched u...

7 items in this pack

Comments: 0 | Viewed: 52 times | Downloaded: 23 times

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Workflow Population histogram in R (1)

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This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: User Chrisser

Attributions:

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Blob Human Gene expression data -

Created: 2011-04-01 09:12:28 | Last updated: 2011-04-01 09:12:40

Credits: User Saeedeh

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License: Creative Commons Attribution-Share Alike 3.0 Unported License

This file contains a list processed  for Human gene expression CEL files relating to the: Impact of NRSF variant over-expression in SK-N-AS human neuroblastoma cells (http://www.ebi.ac.uk/arrayexpress/browse.html?keywords=E-GEOD-22467&expandefo=on). The CEL files were analysed using the MADAT Taverna workflow available on myExperiment: http://www.myexperiment.org/workflows/2002.html

File type: ZIP archive

Comments: 0 | Viewed: 63 times | Downloaded: 40 times

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Pack Example R workflows


Created: 2010-12-13 10:44:04 | Last updated: 2010-12-13 16:28:58

Small workflows illustrating how R can be used within Taverna services

10 items in this pack

Comments: 0 | Viewed: 93 times | Downloaded: 38 times

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