All content

Search filter terms
Filter by category
Filter by type
Filter by tag
Filter by user
Filter by licence
Filter by group
Filter by wsdl
Results per page:
Sort by:
Showing 42 results. Use the filters on the left and the search box below to refine the results.
Type: Taverna 2 User: Alan Williams Licence: by-sa

Workflow EBI_InterproScan_broken (1)

Thumb
This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text and xml. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration. Note that this workflow is deliberately broken

Created: 2014-07-09

Credits: User Alan Williams User Katy Wolstencroft User Hamish McWilliam

Attributions: Workflow EBI_InterproScan_NewServices

Workflow An iframe test (1)

Thumb
But this works

Created: 2014-03-28

Credits: User Alan Williams

Workflow Hello World (1)

Thumb
One of the simplest workflows possible. No workflow input ports, a single workflow output port "greeting", outputting "Hello, world!" as produced by the String Constant "hello".

Created: 2014-03-06

Uploader
Project Biovel

Workflow Data publication example (1)

Thumb
This workflow gives an example of an interaction that makes use of published input data. The data is published on the webdav and the URL passed to the HTML page.

Created: 2012-10-11

Credits: User Alan Williams

Workflow Unix tool service using string replacement (1)

Thumb
The tool service outputs a message that greets using the names specified on Greet's input ports.

Created: 2012-04-05

Credits: User Alan Williams

Workflow Spreadsheet Import Example (1)

Thumb
Example using the SpreadsheetImport service to import data from an Excel spreadsheet. The workflow imports the file spreadsheet file WaterUse.xlsx and generates a graph from the date. The source data is from http://data.gov.uk/

Created: 2012-04-05

Credits: User Alan Williams

Workflow Simple Python example (1)

Thumb
This workflow generates a random number within the range 0 to 100. The generation is done by a python script. The workflow assumes that python is in the path.

Created: 2012-04-05

Credits: User Alan Williams

Workflow Secure Web service call example (2)

Thumb
This is an example of a workflow that contains a call to a secure Web service that runs behind HTTPS and requires user to authenticate. The first thing you can expect to see is a pop up dialog asking if you trust the Web service to be invoked over HTTPS. You can use testuser/testpasswd as username and password for authentication when running the workflow. To see where the security is being configured, right-click the service in the diagram and select "Configure security" from the menu. You ...

Created: 2012-04-05 | Last updated: 2013-06-11

Credits: User Alan Williams

Workflow Retrieve sequence in EMBL format (1)

Thumb
This workflow retrieves a sequence associated with its features in embl format

Created: 2012-04-05 | Last updated: 2012-04-05

Credits: User Alan Williams

Workflow Render gene via BioGPS (3)

Thumb
This workflow uses the REST API of BioGPS to list the plugins and then allow the user to select which plugin to use to display the input gene id

Created: 2012-04-05 | Last updated: 2012-05-23

Credits: User Alan Williams

Results per page:
Sort by: