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Showing 53 results. Use the filters on the left and the search box below to refine the results.
User: Katy Wolstencroft

Blob Bonn Taverna Shims

Created: 2012-08-30 14:18:06

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial provides an introduction to finding, using and designing Shim services for Taverna workflows

File type: PowerPoint presentation

Comments: 0 | Viewed: 74 times | Downloaded: 61 times

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Blob Bonn Taverna WF Engine

Created: 2012-08-30 14:15:51

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial provides an introduction to using the advanced features of the Taverna workflow engine, such as iterations, looping etc

File type: PowerPoint presentation

Comments: 0 | Viewed: 64 times | Downloaded: 48 times

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Blob Bonn Taverna Intro Tutorial

Created: 2012-08-30 14:11:55

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial provides an introduction to designing, combining and sharing workflows with Taverna and myExperiment

File type: PowerPoint presentation

Comments: 0 | Viewed: 72 times | Downloaded: 66 times

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Blob Bozeman Tutorial

Created: 2012-08-22 09:59:37

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial is an introduction to designing and using Taverna workflows and myExperiment. It was created for the workshop "Making Sense of Biological Systems:Using Knowledge Mining to Improve and Validate Models of Living Systems", at Montana State University Aug 2012

File type: PowerPoint presentation

Comments: 0 | Viewed: 54 times | Downloaded: 65 times

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Blob Getting Started with Taverna - an NGS tutorial

Created: 2012-05-23 14:53:24 | Last updated: 2012-05-30 08:48:19

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This tutorial is an introduction to using Taverna, using an example from Chip-Seq analysis

File type: PowerPoint presentation

Comments: 0 | Viewed: 79 times | Downloaded: 82 times

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Workflow SNP Position Information (1)

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This workflow extracts information about the position of SNPs and the genes they are associated with, using BioMart (ENSEMBL Variation 66).

Created: 2012-04-17 | Last updated: 2012-04-17

Credits: User Katy Wolstencroft

Blob Taverna Tutorial Chip-Seq Downstream analysis

Created: 2012-01-17 13:26:09

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This file contains a tutorial to introduce the use of Taverna for Next Gen sequence analysis

File type: PowerPoint presentation

Comments: 0 | Viewed: 50 times | Downloaded: 57 times

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Blob Advanced exercises for Next Gen Taverna tutorial

Created: 2012-01-16 16:56:02 | Last updated: 2012-01-17 16:00:23

Credits: User Katy Wolstencroft

License: Creative Commons Attribution-Share Alike 3.0 Unported License

These exercises highlight some of the more advanced features of the Taverna engine, for example, looping, iteration and retries

File type: PowerPoint presentation

Comments: 0 | Viewed: 40 times | Downloaded: 50 times

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Workflow Reactome pathways (1)

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This workflow returns a list of pathways gene products are involved in, along with their descriptions and Gene Ontology annotations

Created: 2012-01-16

Credits: User Katy Wolstencroft

Workflow Import and convert gene list (1)

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This workflow extracts a column of RefSeq gene IDs from a CSV file and then converts them to Unigene identifiers

Created: 2012-01-15 | Last updated: 2012-03-12

Credits: User Katy Wolstencroft

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