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Showing 349 results. Use the filters on the left and the search box below to refine the results.
User: Alan Williams

Workflow BiomartAndEMBOSSAnalysis (4)

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Using Biomart and EMBOSS soaplab services, This workflow retrieves a number of sequences from 3 species: mouse, human, rat; align them, and returns a plot of the alignment result. Corresponding sequence ids are also returned.

Created: 2009-09-15 | Last updated: 2015-01-26

Workflow Example of a conditional execution workflow (1)

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If the input is true then the string 'foo' is emited, if false then 'bar'. Just a simple example to show how the monster works, so to speak. Note that this type of workflow is not suitable for Taverna 2. An alternative mechanism is recommended.

Created: 2008-03-05 | Last updated: 2012-05-23

Credits: User Tomoinn

Creator

Pack Taverna 1.7 starter pack


Created: 2008-07-17 21:06:12 | Last updated: 2018-01-28 19:42:32

Everything to get started with Taverna 1.7 - latest version is 1.7.2

19 items in this pack

Comments: 0 | Viewed: 704 times | Downloaded: 242 times

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Pack Taverna 2.2 starter pack


Created: 2010-06-11 13:40:05 | Last updated: 2012-01-03 15:46:09

The Taverna team are pleased to announce that Taverna 2.2.0 workbench and command line tool are now available for users to download. Taverna 2.2.0 includes improvements to the workbench user interface and gives users greater control over the workflow engine.  Here are a few of the new features in the workbench:     * Loading and sharing of service sets     * Ability to load and edit workflows that contain services that are offline     ...

20 items in this pack

Comments: 0 | Viewed: 836 times | Downloaded: 187 times

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Pack Taverna 2.4 starter pack


Created: 2012-03-18 13:43:06 | Last updated: 2013-10-08 12:49:44

Taverna 2.4.0 Workbench and Command Line Tool released   The Taverna team are pleased to announce that Taverna 2.4.0 Workbench and the Command Line Tool are now available for download.   Here are a number of new features in the Workbench: Text Constant service allowing easier entry of large textual values Greater control over what is return from REST service Ability to use all the example values for a workflow run with one button Easier annotation of serv...

20 items in this pack

Comments: 0 | Viewed: 525 times | Downloaded: 135 times

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Pack Taverna localworker example pack


Created: 2008-09-27 17:57:39 | Last updated: 2012-03-05 11:33:29

A pack of examples of the calling of Taverna's localworkers. The example workflows make extensive use of the default value mechanism for associating a value with a port of a service.  An alternative set of workflows that use string constants to make the values more explicit is under development.

103 items in this pack

Comments: 0 | Viewed: 389 times | Downloaded: 85 times

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Workflow Fetch today's xkcd comic (1)

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Use the local java plugins and some filtering operations to fetch the comic strip image from http://xkcd.com/ Based on the FetchDailyDilbert workflow.

Created: 2008-03-05 | Last updated: 2008-04-07

Credits: User Tomoinn User Stian Soiland-Reyes

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Pack Taverna 2.1 starter pack


Created: 2009-12-10 16:04:54 | Last updated: 2009-12-18 11:15:36

The Taverna team are happy to announce that Taverna 2.1 is now available for download. It includes many new features and bug fixes based on extensive usability reviews and hours of testing. 2.1 truly is the next release up from the 1.7.x line. 2.1 features:    * Copy/paste, shortcuts, undo/redo, drag and drop    * An Animated workflow diagram    * Remembers added/removed services    * Secure Web services support    * Up-to-da...

12 items in this pack

Comments: 0 | Viewed: 218 times | Downloaded: 217 times

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Workflow Retrieve sequence in EMBL format (3)

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This workflow retrieves a sequence associated with its features in embl format

Created: 2009-06-17

Credits: User Franck Tanoh User Tomoinn User Stuart Owen

Workflow Fetch PDB flatfile from RCSB server (1)

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Given an identifier such as '1crn' fetches the PDB format flatfile and returns the corresponding 3D image of the protein.

Created: 2008-03-05 | Last updated: 2008-03-31

Credits: User Tomoinn

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