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User: Antoon Goderis Licence: by-sa

Workflow blast_simplifier.xml (1)

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No description

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Workflow 1 (2)

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Trivial workflow which will initially fail, retry twice then fall over to the alternative specified for the FailingThing process.

Created: 2007-11-06 | Last updated: 2007-11-20

Credits: User Antoon Goderis User Carole Goble User A. Random Scientist Network-member try it out

Attributions:

Workflow Picture of me (2)

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If you enter http://www.cs.man.ac.uk/~goderisa as input I smile back at you as output.

Created: 2007-10-03

Workflow metabolic_pathway.xml (1)

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A list of Kegg entires are supplied to the Kegg database which then retrieves the associated metabolic pathways for each entry supplied. e.g. Ids takes in a value of 351, whilst abbr takes in a value of hsa. Thus hsa:351 corresponds to neurodegenerative disorders and alzheimers disease pathways. [fisherp@cs.man.ac.uk]

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

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Blob User survey report

Created: 2008-10-10 09:44:52

Credits: User Antoon Goderis

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Summary report of user survey on workflow sharing, re-use, and discovery

File type: Adobe PDF

Comments: 0 | Viewed: 41 times | Downloaded: 43 times

This File has no tags!

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Blob CA 24 exercises

Created: 2008-10-09 14:39:01

Credits: User Antoon Goderis

License: Creative Commons Attribution-Share Alike 3.0 Unported License

PowerPoint file containg 12 workflow re-use and discovery exercises, as part of CA24.

File type: PowerPoint presentation

Comments: 0 | Viewed: 73 times | Downloaded: 49 times

This File has no tags!

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Blob CA24 assessments

Created: 2008-10-09 14:29:36 | Last updated: 2008-10-09 14:30:30

Credits: User Antoon Goderis

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Excel file with assessments made by 24 participants as part of CA24. See exercise materials to understand the columns or contact goderisa@cs.man.ac.uk.

File type: Excel workbook

Comments: 0 | Viewed: 50 times | Downloaded: 33 times

This File has no tags!

Workflow linking3.xml (1)

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This workflow links between a specified EMBL accesion number to corresponding identifiers in the MEDLINE database.

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Workflow metabolic.xml (1)

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An example of how a more complex workflow can federate multiple resources to perform data mining. In this case a single input data item in the form of a probe set identifier is cross referenced to data sets in multiple locations to answer a kind of 'show me everything about this data' question.

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Workflow gene_ontology_diagram.xml (1)

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This workflow builds up a subgraph of the Gene Ontology (http://www.geneontology.org) to show the context for a supplied term or terms. It shows this context by colouring all ancestors of the term, all children and all siblings. By default, ancestors of the supplied term or terms are coloured orange, siblings purple and direct children teal. Other terms appear in the default wheat colour.

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

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