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User: Adam Woznica
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Blob Input data and background knowledge used in the KUP ...

Created: 2011-05-25 16:39:48

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Compressed RM repository directory containing input data and background knowledge used in the KUP data mining challenge (http://tunedit.org/challenge/ON)

File type: ZIP archive

Comments: 0 | Viewed: 31 times | Downloaded: 10 times

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Blob Plots fibrosis data (R script)

Created: 2011-05-23 13:02:34 | Last updated: 2011-05-24 20:27:58

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Plots a (modified) heatmap of the fibrosis gene data describing different genes used in various studies on fibrosis. The input dataset is prepared in the "prepare-fibrosis-data" RM workflow. Possible values in the input data are: 1 (a gene is Up regulated), -1 (Down regulated), 0 (Unmodified) and -2 (missing value). It requires the "gplots" R package.

File type: Trident (Package)

Comments: 0 | Viewed: 32 times | Downloaded: 15 times

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Blob Plots an attribute similarity matrix on gene data (R...

Created: 2011-05-23 13:01:44 | Last updated: 2011-05-25 15:46:10

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Plots an attribute similarity matrix computed from the provided data frame. The input dataset is prepared in the "prepare-gene-correlation" RM workflow and is assumed to contain genes as rows, and gene functions and locations as columns. In the visualized matrix columns correspond to gene locations and rows correspond to gene functions. The supported types of attribute similarities are: the covariance, the Hamming distance, and a modified Hamming distance that focuses on columns wit...

File type: Trident (Package)

Comments: 0 | Viewed: 52 times | Downloaded: 51 times

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Blob R library

Created: 2011-05-23 12:50:59 | Last updated: 2011-05-24 20:27:32

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

R library used by other R scripts.

File type: Trident (Package)

Comments: 0 | Viewed: 28 times | Downloaded: 18 times

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Blob RM repository directory containing data

Created: 2011-05-23 12:49:04 | Last updated: 2011-05-24 20:26:36

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Compressed directory from RM repository containing data used by the different workflows and R scirpts.

File type: ZIP archive

Comments: 0 | Viewed: 24 times | Downloaded: 14 times

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Blob A sample visualization produced by the R functions f...

Created: 2011-05-23 13:17:49 | Last updated: 2011-05-24 20:30:25

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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File type: Adobe PDF

Comments: 0 | Viewed: 37 times | Downloaded: 22 times

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Blob A sample visualization produced by the R functions f...

Created: 2011-05-23 13:17:10 | Last updated: 2011-05-24 20:30:47

Credits: User Adam Woznica

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

File type: Adobe PDF

Comments: 0 | Viewed: 21 times | Downloaded: 11 times

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