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Items tagged with " list" (3)

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Workflows (3)

Taverna 1

Original Uploader

Jumblej...

fetch_fasta (v1)

Created: 20/03/09 @ 11:22:45 | Last updated: 20/03/09 @ 11:29:16

Credits: Jumblejumble

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This work flow is designed to take an EMBL file containing the genomic data for an identified bacterium. From this information the workflow can determine whether or not that this strain is an MRSA type of bug. This can be determined based on the MecA profile of the given strain. Blast is utilised to find a relationship with given proteins and that of know S. aureus strains. This phylogenic output is generated from a ClustalW algorithm that plots a phylogenic tree. The output is prese...

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 1 | Citations: 0

Viewed: 120 times | Downloaded: 63 times

Tags (11):

alignment
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beanshell
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blastall
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database
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fetch
|
file
|
list
|
strings
|
text
|
tree
|
FASTA

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Download (v1)

Taverna 1

Original Uploader

Michael Gerlich

Search InChI in ChemSpider (v1)

Created: 30/03/09 @ 09:24:33 | Last updated: 30/03/09 @ 09:43:07

Credits: Michael Gerlich

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflows queries ChemSpider for compound information and compound images. Note that a Chemspider security token is needed in order to access some of the ChemSpider services (receive one by registering at ChemSpider). Possible search terms might be InChI codes, ChemSpider identifiers or names.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

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