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Items tagged with "smith-waterman" (4)

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Workflows (4)
Taverna 1

Original Uploader

Workflow EBI_FASTA (v1)

Created: 30/05/08 @ 23:50:46 | Last updated: 02/06/08 @ 21:31:18

Credits: User Hamish McWilliam

License: Creative Commons Attribution 3.0 License

Ebi_fasta_20674_1
Run a FASTA or SSEARCH sequence similarity search using the EBI's WSFasta service (see http://www.ebi.ac.uk/Tools/webservices/services/fasta).

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 254 times | Downloaded: 216 times

Tags (6):

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Taverna 1

Original Uploader

Workflow EBI FASTA with prompts (v3)

Created: 30/05/08 @ 23:53:16 | Last updated: 02/06/08 @ 21:31:42

Credits: User Hamish McWilliam

Attributions: Workflow EBI_FASTA

License: Creative Commons Attribution 3.0 License

Ebi_fasta_with_prompts_25201_3
Run a FASTA analysis using the EBI’s WSFasta service (see http://www.ebi.ac.uk/Tools/webservices/services/fasta). This workflow wraps the EBI_FASTA workflow to provide a basic user interface which prompts for the required inputs: sequence, database, FASTA program and user e-mail. Other parameters (e.g. matrix, gap penalties, etc.) are allowed to default.

Rating: 0.0 / 5 (0 ratings) | Versions: 3 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 374 times | Downloaded: 276 times

Tags (7):

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Taverna 1

Original Uploader

Workflow EBI_MPsrch (v1)

Created: 02/06/08 @ 21:49:11 | Last updated: 02/06/08 @ 21:49:12

Credits: User Hamish McWilliam

License: Creative Commons Attribution 3.0 License

Ebi_mpsrch_820_1
Run a Smith-Waterman sequence search using the EBI’s WSMPsrch service (see http://www.ebi.ac.uk/Tools/webservices/services/mpsrch).

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 266 times | Downloaded: 217 times

Tags (7):

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Taverna 1

Original Uploader

Workflow EBI_ScanPS (v1)

Created: 03/06/08 @ 05:57:10

Credits: User Hamish McWilliam

License: Creative Commons Attribution 3.0 License

Ebi_scanps_5485_1
Perform a Smith-Waterman sequence similarity search using the ScanPS tool (see http://www.compbio.dundee.ac.uk/Software/Scanps/scanps.html). In the case the EBI's WSScanPS web service (see http://www.ebi.ac.uk/Tools/webservices/services/scanps) is used to run the tool.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 217 times | Downloaded: 216 times

Tags (6):

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