User: Thomaskelder

Name: Thomaskelder

Joined: Tuesday 16 September 2008 11:11:58 (UTC)

Last seen: Tuesday 15 February 2011 10:04:57 (UTC)

Email (public): Not specified

Website: Not specified

Location: Maastricht, Netherlands

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Thomaskelder has been credited 5 times

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Interests:

pathway analysis, microarray analysis, community curation, open science...

Field/Industry: Bioinformatics

Occupation/Role(s): Phd student

Organisation(s):

Maastricht University

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Example protein list for wikipathways workflow

Created: 2008-09-16 11:40:24

Credits: Thomaskelder

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This is an example protein list that can be used as input to this workflow.

File type: Plain text

Comments: 0 | Viewed: 135 times | Downloaded: 48 times

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Taverna 2

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Download pathways for external references ... (2)

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Takes a list of external references to genes/proteins/metabolites, finds all pathways on WikiPathways that contain one of the given genes/proteins/metabolites and downloads them in a given file format.

Created: 2009-02-03

Credits: Thomaskelder

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Taverna 1

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Write pathway to disk (2)

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Downloads and writes a pathway from WikiPathways to a local disk in the given file type.

Created: 2008-11-14 | Last updated: 2008-11-14

Credits: Thomaskelder

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Taverna 1

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Get pathways by external reference (3)

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Finds pathways on WikiPathways by an external gene/protein/metabolite reference. See http://www.pathvisio.org/Help_1.1#Supported_database_systems for a list of supported database systems.