User: Marco Roos

Name: Marco Roos

Joined: Saturday 21 July 2007 @ 10:43:23 (GMT)

Last seen: Sunday 22 January 2012 @ 16:17:42 (GMT)

Email (public): m.roos [at] lumc.nl

Website: http://www.lumc.nl/con/6020/39898/909290026392525

Location: Leiden, Netherlands

63 Friends

15 Groups (admin)

15 Groups (member)

35 Workflows

10 Packs

3 Files

0 Favourites

Marco Roos has been credited 39 times

Marco Roos has an average rating of:

4.0 / 5

(7 ratings in total)

for their items

My role as a biologist and bioinformatician in e-science is to help increase the usefulness of emerging information technologies for biology, while experimenting with new ways to increase insight into mechanisms related to structure and function of DNA in the cell. I experiment with technologies such as workflow, knowledge extraction from text, semantic web and virtual research environments such as myExperiment.

More information on the blog below (originally uploaded as an example for the 'NBIC on workflows' workshop in Lunteren, the Netherlands, March 2008).

http://www.myexperiment.org/blogs/15

Other contact details:

Also see my web page at the University of Amsterdam: http://home.medewerker.uva.nl/m.roos1

Interests:

Structure/function relationship of DNA in the cell, e-science, automated support for modeling biological mechanisms by knowledge extraction and semantic web technology.

Field/Industry: Biology

Occupation/Role(s): PhD, e-(bio)scientist (biology 'power-user'), biology e-Science liaison for NBIC and e-Science organisations

Organisation(s):

Leiden University Medical Centre
University of Amsterdam
NBIC
OMII-UK / myGrid

Member Alex Voss	Alex Voss Joined: Thursday 26 July 2007 @ 10:43:50 (GMT) I shall soon be starting my post as a SICSA Advanced Research Fellow in the School of Computer Science at the University of St Andrews. Last active: Monday 09 May 2011 @ 13:21:40 (GMT) Website: http://www.alexandervoss.de \| Email (public): alex.voss [at] ncess.ac.uk	View Message
Member Andrew Gibson	Andrew Gibson Joined: Tuesday 24 July 2007 @ 10:17:42 (GMT) My background is in biology, and I am now mostly interested in developing emerging technologies from computer science and trying to make them more accessible to s... Last active: Wednesday 27 January 2010 @ 09:08:34 (GMT) Email (public): gibson [at] uva.nl Field/Industry: Academia \| Occupation/Role(s): Postdoctoral Researcher	View Message
Member Anika Joecker	Anika Joecker Joined: Monday 13 August 2007 @ 15:34:31 (GMT) I am a Postdoc and teamleader of the bioinformatics group at the Molecular Genome Analysis division at the German Cancer Research Center in Heidelberg, Germany. Currently I am w... Last active: Monday 15 November 2010 @ 14:11:17 (GMT) Website: http://www.dkfz.de/en/mga/Groups/Bioinformatics.html \| Email (public): ajoecker [at] gmx.de Field/Industry: Cancer research \| Occupation/Role(s): Postdoc and Teamleader	View Message
Member Antoine van Kampen	Antoine van Kampen Joined: Monday 23 July 2007 @ 13:05:34 (GMT) See http://www.bioinformaticslaboratory.nl or http://www.nbic.nl Last active: Tuesday 12 January 2010 @ 14:06:34 (GMT) Website: http://www.bioinformaticslaboratory.nl \| Email (public): a.h.vankampen [at] amc.uva.nl	View Message
Member Antoon Goderis	Antoon Goderis Joined: Tuesday 31 July 2007 @ 17:23:00 (GMT) Forget Poirot, how about an infamous Belgian Last active: Monday 27 July 2009 @ 09:48:55 (GMT) Website: http://www.cs.man.ac.uk/~goderisa Occupation/Role(s): Former member of the myExperiment project	View Message
Member Barbera van Schaik	Barbera van Schaik Joined: Wednesday 20 August 2008 @ 14:14:54 (GMT) No description Last active: Monday 11 July 2011 @ 11:23:30 (GMT) Website: http://www.bioinformaticslaboratory.nl/ \| Email (public): b.d.vanschaik [at] amc.uva.nl Field/Industry: Research \| Occupation/Role(s): Bioinformatician	View Message
Member Barend	Barend Joined: Thursday 16 July 2009 @ 11:09:26 (GMT) The reason I joined MyExperiment is that I believe that such an environment, when properly supported by in-text semantic technologies could drive international collaboration, e-... Last active: Friday 18 March 2011 @ 09:17:59 (GMT) Website: http://www.biosemantics.org \| Email (public): barend.mons [at] nbic.nl Field/Industry: Bioinformatics, computational biology, Concept Web \| Occupation/Role(s): Associate Professor, Head of the BioAssist Program of NBIC	View Message
Member bgood	bgood Joined: Wednesday 03 October 2007 @ 01:22:33 (GMT) "I have no plans to take over the earth" Last active: Wednesday 28 May 2008 @ 21:42:41 (GMT) Website: http://i9606.blogger.com \| Email (public): goodb [at] interchange.ubc.ca	View Message
Member Carole Goble	Carole Goble Joined: Monday 23 July 2007 @ 11:01:06 (GMT) I work on myExperiment. Last active: Saturday 04 February 2012 @ 18:32:36 (GMT) Website: http://www.cs.man.ac.uk/~carole/ \| Email (public): carole [at] cs.man.ac.uk	View Message
Member Christine Chichester	Christine Chichester Joined: Tuesday 04 August 2009 @ 10:30:11 (GMT) No description Last active: Tuesday 01 December 2009 @ 09:54:55 (GMT)	View Message
Member David De Roure	David De Roure Joined: Saturday 21 July 2007 @ 07:26:51 (GMT) Dave De Roure is a Professor of e-Research in the Oxford e-Research Centre and National Strategic Director for e-Social Science. Closely involved in the UK e-Science p... Last active: Thursday 09 February 2012 @ 08:00:38 (GMT) Website: http://www.oerc.ox.ac.uk/people/dder \| Email (public): david.deroure [at] oerc.ox.ac.uk Field/Industry: e-Research	View Message
Member David Withers	David Withers Joined: Friday 20 July 2007 @ 13:55:39 (GMT) I'm a software engineer working on the Taverna and myExperiment projects. Last active: Monday 30 January 2012 @ 13:19:05 (GMT) Email (public): david.withers [at] manchester.ac.uk Field/Industry: Computer Science \| Occupation/Role(s): Software Engineer	View Message
Member Dennis Leenheer	Dennis Leenheer Joined: Monday 04 October 2010 @ 12:53:10 (GMT) No description Last active: Tuesday 26 April 2011 @ 08:35:48 (GMT)	View Message
Member Dmitry Katsubo	Dmitry Katsubo Joined: Friday 31 July 2009 @ 14:00:33 (GMT) No description Last active: Saturday 23 January 2010 @ 16:05:33 (GMT) Website: http://www.linkedin.com/in/dkatsubo \| Email (public): dmitry.katsubo [at] gmail.com Field/Industry: BioInformatics \| Occupation/Role(s): Scientific Developer	View Message
Member Don Cruickshank	Don Cruickshank Joined: Monday 23 July 2007 @ 09:14:48 (GMT) I am a myExperiment developer. Last active: Wednesday 25 January 2012 @ 11:08:16 (GMT) Website: http://www.ecs.soton.ac.uk/people/dgc \| Email (public): dgc [at] ecs.soton.ac.uk Occupation/Role(s): Computer Scientist	View Message
Member Douglas B. Kell	Douglas B. Kell Joined: Friday 27 July 2007 @ 15:14:40 (GMT) I direct the Manchester Centre for Integrative Systems Biology (www.mcisb.org/) and runa fairly large research group in this general space. Last active: Monday 30 May 2011 @ 22:22:05 (GMT) Website: http://dbkgroup.org/ \| Email (public): dbk [at] manchester.ac.uk	View Message
Member Duncan Hull	Duncan Hull Joined: Friday 20 July 2007 @ 17:05:02 (GMT) I'm one of Dougs Thugs and a user advocate for myExperiment. Last active: Friday 06 May 2011 @ 11:02:58 (GMT) Website: http://duncan.hull.name	View Message
Member Francesco Ferrari	Francesco Ferrari Joined: Thursday 10 September 2009 @ 14:24:23 (GMT) No description	View Message
Member Franck Tanoh	Franck Tanoh Joined: Wednesday 01 August 2007 @ 15:21:20 (GMT) No description Last active: Thursday 17 March 2011 @ 10:26:23 (GMT)	View Message
Member Frank Terpstra	Frank Terpstra Joined: Tuesday 04 December 2007 @ 13:15:30 (GMT) No description Website: http://staff.science.uva.nl/~ftrpstra \| Email (public): ftrpstra [at] science.uva.nl Occupation/Role(s): PhD student	View Message
Member George	George Joined: Wednesday 12 December 2007 @ 01:01:03 (GMT) No description Last active: Thursday 11 August 2011 @ 09:52:08 (GMT) Email (public): georgina.moulton [at] manchester.ac.uk Field/Industry: Bio/Health Informatics Education and Development \| Occupation/Role(s): Education and Development Fellow	View Message
Member Glatard	Glatard Joined: Tuesday 04 March 2008 @ 14:08:05 (GMT) I am using Taverna to design workflows running on the EGEE grid. EGEE jobs are wrapped into Web-Services and can then be embedded in a Taverna workflow. During my PhD, I s... Last active: Monday 18 April 2011 @ 18:08:16 (GMT) Website: http://www.creatis.insa-lyon.fr/~glatard \| Email (public): glatard [at] creatis.insa-lyon.fr Occupation/Role(s): researcher	View Message
Member Harish Dharuri	Harish Dharuri Joined: Thursday 07 July 2011 @ 10:07:34 (GMT) No description Last active: Tuesday 02 August 2011 @ 12:15:18 (GMT)	View Message
Member Ilkay Altintas	Ilkay Altintas Joined: Thursday 27 March 2008 @ 21:24:56 (GMT) No description Last active: Thursday 30 December 2010 @ 00:54:22 (GMT) Website: http://users.sdsc.edu/~altintas \| Email (public): altintas [at] sdsc.edu Field/Industry: Computer Science \| Occupation/Role(s): Director, Scietific Workflow Automation Tech. Lab.	View Message
Member Inda	Inda Joined: Thursday 31 January 2008 @ 09:45:14 (GMT) No description Last active: Friday 08 February 2008 @ 19:52:21 (GMT)	View Message
Member Ishtiaq AHMAD	Ishtiaq AHMAD Joined: Friday 23 October 2009 @ 13:25:38 (GMT) Developing Data Analysis Framwork to execute individual bioinformatics tools and workflows in parallel computational environment such as GRID or local cluster. Last active: Thursday 08 December 2011 @ 19:36:27 (GMT) Website: http://www.biomac.nl \| Email (public): I.Ahmad [at] rug.nl Field/Industry: Proteomics related Bioinformatics \| Occupation/Role(s): Scientific Programer	View Message
Member Jano van Hemert	Jano van Hemert Joined: Wednesday 08 August 2007 @ 16:05:24 (GMT) No description Last active: Thursday 05 February 2009 @ 16:04:05 (GMT) Website: http://www.vanhemert.co.uk/ \| Email (public): jvhemert [at] nesc.ac.uk	View Message
Member Jiten Bhagat	Jiten Bhagat Joined: Thursday 02 August 2007 @ 15:44:50 (GMT) Your friendly neighbourhood BioCatalogue and myExperiment developer Last active: Tuesday 13 December 2011 @ 16:57:26 (GMT) Email (public): jits [at] cs.man.ac.uk Occupation/Role(s): Software Developer/Engineer	View Message
Member Jose Enrique Ruiz	Jose Enrique Ruiz Joined: Tuesday 08 March 2011 @ 00:23:14 (GMT) One of the best bug makers around.. Last active: Wednesday 08 February 2012 @ 15:28:24 (GMT) Website: http://amiga.iaa.es/p/67-jose-enrique-ruiz.htm \| Email (public): jer [at] iaa.es	View Message
Member Jun Zhao	Jun Zhao Joined: Friday 20 July 2007 @ 17:29:49 (GMT) No description Last active: Tuesday 16 February 2010 @ 13:36:39 (GMT) Field/Industry: Research/Biological informatics \| Occupation/Role(s): Research Officer	View Message
Member Katy Wolstencroft	Katy Wolstencroft Joined: Friday 20 July 2007 @ 18:31:02 (GMT) No description Last active: Wednesday 01 February 2012 @ 09:57:10 (GMT) Website: http://www.mygrid.org.uk \| Email (public): katherine.wolstencroft [at] manchester.ac.uk	View Message
Member Kostas	Kostas Joined: Tuesday 23 November 2010 @ 10:13:49 (GMT) No description Last active: Monday 16 January 2012 @ 12:38:35 (GMT)	View Message
Member Kristina Hettne	Kristina Hettne Joined: Monday 03 August 2009 @ 09:00:59 (GMT) I am a bioinformatician working in the field of biosemantics Last active: Thursday 26 January 2012 @ 12:46:12 (GMT) Website: http://www.biosemantics.org/ \| Email (public): k.m.hettne [at] lumc.nl Field/Industry: Academic \| Occupation/Role(s): Scientific Researcher	View Message
Member M. Scott Marshall	M. Scott Marshall Joined: Friday 20 July 2007 @ 23:28:32 (GMT) No description Last active: Friday 27 November 2009 @ 18:08:45 (GMT)	View Message
Member Mark Borkum	Mark Borkum Joined: Friday 20 July 2007 @ 17:38:28 (GMT) I'm one of the developers and a postgraduate researcher at the School of Chemistry, University of Southampton (The guitar is an Ibanez RG7321) Last active: Wednesday 21 September 2011 @ 12:20:09 (GMT) Email (public): mib104 [at] ecs.soton.ac.uk Occupation/Role(s): Researcher	View Message
Member Matt Lee	Matt Lee Joined: Friday 20 July 2007 @ 13:49:53 (GMT) I hack on myExperiment Last active: Thursday 15 November 2007 @ 19:05:04 (GMT) Website: http://myexperiment.org/ \| Email (public): mattl [at] myexperiment.org	View Message
Member Maurice Bouwhuis	Maurice Bouwhuis Joined: Wednesday 12 September 2007 @ 12:49:20 (GMT) No description	View Message
Member Meik Poschen	Meik Poschen Joined: Tuesday 16 October 2007 @ 16:10:09 (GMT) I am a researcher working at the Manchester eResearch Centre (MeRC) in different interdisciplinary projects, e.g. exploring uptake, use and design of new information and communi... Last active: Friday 07 October 2011 @ 11:15:05 (GMT) Website: http://www.merc.ac.uk/?q=Meik \| Email (public): meik.poschen [at] manchester.ac.uk	View Message
Member Morris Swertz	Morris Swertz Joined: Saturday 21 July 2007 @ 11:00:26 (GMT) I am interested in generating software infrastructures that biologist want to have. To see what I mean, read NRG 8(3):235 or the online MOLGENIS showcase: http://gbic.biol.ru g.... Last active: Wednesday 04 January 2012 @ 11:50:12 (GMT) Website: http://www.rug.nl/staff/m.a.swertz \| Email (public): m.a.swertz [at] rug.nl	View Message
Member Nigam Shah	Nigam Shah Joined: Thursday 13 August 2009 @ 00:39:08 (GMT) No description Last active: Monday 22 February 2010 @ 18:08:16 (GMT) Website: http://www.stanford.edu/~nigam	View Message
Member Paolo	Paolo Joined: Wednesday 30 January 2008 @ 15:25:36 (GMT) No description Last active: Tuesday 08 November 2011 @ 14:26:17 (GMT) Website: http://www.cs.man.ac.uk/~pmissier/ \| Email (public): pmissier [at] cs.man.ac.uk	View Message
Member Paolo Romano	Paolo Romano Joined: Thursday 02 August 2007 @ 13:36:47 (GMT) I collect beer bottle labels, you are veery welcome to send some to me, especially from abroad (I mean from outside Italy). Last active: Sunday 11 December 2011 @ 10:27:12 (GMT) Website: http://www.paoloromano.it/ \| Email (public): paolo.romano [at] istge.it	View Message
Member Paul Fisher	Paul Fisher Joined: Thursday 26 July 2007 @ 16:46:52 (GMT) I am currently employed by Astrazeneca. As a consequence, the workflows developed previously to this employment (before 5th September 2011) may no longer be supported. Last active: Monday 30 January 2012 @ 09:16:48 (GMT) Website: http://twitter.com/#!/paul_r_fisher Field/Industry: Bioinformatics \| Occupation/Role(s): Bioinformatics Scientist - Oncology	View Message
Member Peter Li	Peter Li Joined: Tuesday 13 November 2007 @ 17:42:19 (GMT) Enjoys dining at buffet restaurants. Counts Tai Wu and Efes as two favourites. Last active: Thursday 03 November 2011 @ 10:01:00 (GMT) Website: http://dbkgroup.org/peter/ Field/Industry: Academia \| Occupation/Role(s): Experimental Officer	View Message
Member Pieter Neerincx	Pieter Neerincx Joined: Monday 25 February 2008 @ 12:55:28 (GMT) I have added my ‘abstract’ for the NBIC workshop ‘NBIC on workflows’ as a blog: http://www.myexperiment.org/blogs/26 Last active: Friday 18 September 2009 @ 14:07:28 (GMT) Field/Industry: Biology \| Occupation/Role(s): PhD student	View Message
Member Pieter Neerincx	Pieter Neerincx Joined: Monday 25 February 2008 @ 12:55:28 (GMT) I have added my ‘abstract’ for the NBIC workshop ‘NBIC on workflows’ as a blog: http://www.myexperiment.org/blogs/26 Last active: Friday 18 September 2009 @ 14:07:28 (GMT) Field/Industry: Biology \| Occupation/Role(s): PhD student	View Message
Member Piotr Hołubowicz	Piotr Hołubowicz Joined: Friday 05 August 2011 @ 09:48:11 (GMT) No description Last active: Wednesday 01 February 2012 @ 09:32:30 (GMT)	View Message
Member Piter T. de Boer	Piter T. de Boer Joined: Thursday 28 May 2009 @ 09:11:26 (GMT) No description Last active: Sunday 31 January 2010 @ 11:38:16 (GMT) Field/Industry: Computer Science \| Occupation/Role(s): Researcher/Engineer	View Message
Member Polina	Polina Joined: Thursday 25 March 2010 @ 10:30:15 (GMT) No description	View Message
Member Radhouane	Radhouane Joined: Tuesday 16 June 2009 @ 15:38:48 (GMT) No description Last active: Monday 20 July 2009 @ 13:46:44 (GMT)	View Message
Member Ravi	Ravi Joined: Wednesday 28 November 2007 @ 21:50:28 (GMT) No description Last active: Wednesday 19 January 2011 @ 16:31:30 (GMT)	View Message
Member Reinout van Schouwen	Reinout van Schouwen Joined: Friday 12 November 2010 @ 09:40:07 (GMT) No description Last active: Tuesday 07 February 2012 @ 11:02:51 (GMT) Website: http://www.biosemantics.org/ \| Email (public): r.m.van_schouwen [at] lumc.nl Field/Industry: Bioinformatics \| Occupation/Role(s): Scientific developer	View Message
Member Rob Procter	Rob Procter Joined: Thursday 11 October 2007 @ 17:39:22 (GMT) No description Last active: Saturday 24 December 2011 @ 11:11:51 (GMT) Website: http://www.ncess.ac.uk/about_us/people/?centre=&person=4 \| Email (public): rob.procter [at] ncess.ac.uk	View Message
Member Simon Jupp	Simon Jupp Joined: Saturday 21 July 2007 @ 12:34:16 (GMT) No description Last active: Wednesday 11 January 2012 @ 14:32:21 (GMT) Website: http://www.cs.man.ac.uk/~sjupp \| Email (public): simon.jupp [at] manchester.ac.uk	View Message
Member Sophia katrenko	Sophia katrenko Joined: Monday 10 December 2007 @ 21:50:09 (GMT) No description Last active: Monday 10 December 2007 @ 22:03:39 (GMT)	View Message
Member Stian Soiland-Reyes	Stian Soiland-Reyes Joined: Friday 20 July 2007 @ 16:58:17 (GMT) I am one of the myGrid developers working in University of Manchester, mainly working on Taverna, but also involved in myExperiment development. Most of the workflows I will pu... Last active: Friday 10 February 2012 @ 08:55:31 (GMT) Website: http://soiland.no/work \| Email (public): soilandreyes [at] cs.manchester.ac.uk Field/Industry: Education \| Occupation/Role(s): Software engineer	View Message
Member Stuart Owen	Stuart Owen Joined: Thursday 08 November 2007 @ 12:11:20 (GMT) SysMO-DB engineer and developer, and Taverna engineer. Last active: Friday 21 October 2011 @ 11:03:13 (GMT) Website: http://www.sysmo-db.org Field/Industry: Computer Science \| Occupation/Role(s): Software Engineer	View Message
Member Suza Adam, Rapiddiscovery.biz	Suza Adam, Rapiddiscovery.biz Joined: Sunday 19 October 2008 @ 08:59:42 (GMT) Studied journalism and marketing (BA Communications) and investment management / investment banking. Practised investor relations for more than 15 years, focused in hi-tech indu... Last active: Wednesday 22 October 2008 @ 16:52:19 (GMT) Website: http://www.lifesparks.co.za \| Email (public): info [at] rapiddiscovery.com Field/Industry: Life Sciences \| Biotechnology \| Occupation/Role(s): Business entrepreneur	View Message
Member Wassinki	Wassinki Joined: Monday 25 February 2008 @ 13:11:39 (GMT) I have received my master's degree in 2005 in computer science. During my masters, I did research on artificial intelligence, multi-agent systems and driving simulation. Current... Last active: Wednesday 29 July 2009 @ 07:05:10 (GMT) Website: http://hmi.ewi.utwente.nl/tkisis/persoon/Ingo%20Wassink \| Email (public): wassinki [at] ewi.utwente.nl Field/Industry: HCI/Workflow \| Occupation/Role(s): PhD student	View Message
Member Wibisono	Wibisono Joined: Wednesday 23 January 2008 @ 14:54:24 (GMT) No description Last active: Thursday 28 May 2009 @ 11:07:36 (GMT)	View Message
Member Willem van Hage	Willem van Hage Joined: Monday 10 December 2007 @ 22:00:16 (GMT) No description	View Message
Member Yassene	Yassene Joined: Tuesday 14 June 2011 @ 16:42:50 (GMT) No description Last active: Tuesday 14 June 2011 @ 16:51:07 (GMT)	View Message
Member Yuwei Lin	Yuwei Lin Joined: Monday 15 October 2007 @ 16:03:03 (GMT) I am a sociologist whose main interest is studying socio-technical dynamics in ICT development and adoption processes. Last active: Monday 14 December 2009 @ 17:57:35 (GMT) Website: http://www.ylin.org Occupation/Role(s): Social Scientist	View Message