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User: Barend
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Name: Barend Joined: Thursday 16 July 2009 @ 11:09:26 (GMT) Last seen: Friday 18 March 2011 @ 09:17:59 (GMT) Email (public): barend.mons [at] nbic.nl Website: http://www.biosemantics.org Location: Leiden, Netherlands |
Barend has been credited 3 times Barend has an average rating of: 0.0 / 5 (0 ratings in total) for their items |
The reason I joined MyExperiment is that I believe that such an environment, when properly supported by in-text semantic technologies could drive international collaboration, e-science, but notably community annotation of dispersed biological resources, that is why we started the Concept Web Alliance, with several of the founders of MyExperiment at the table.
Since October 2009 I am the head of the BioAssist Programme of NBIC
See my wikipeople page here: proteins.wikiprofessional.org/index.php/Concept:101668678
Please note this is a staging server, we will move to production soon and the link may be broken
Other contact details:
Not specifiedInterests:
My personal interest is in concept-based information management, especially for international community annotation
Field/Industry: Bioinformatics, computational biology, Concept Web
Occupation/Role(s): Associate Professor, Head of the BioAssist Program of NBIC
Organisation(s):
Leiden University Medical Center (LUMC)
Netherlands Bioinformatics Center (NBIC)
Groups that Barend owns
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Unique name: CWA Created: Monday 27 July 2009 @ 12:48:15 (GMT)
This group aims to connect all people actively interested or participating in the new initiative, the Concept Web Alliance.(CWA)
the Aim of the CWA is: “To enable an open collaborative environment to jointly address the challenges associated with high volume scholarly and professional data production, storage, interoperability and analyses for knowledge discovery.“
The 'Magnet Gro...
4 shared items | 2 announcements Members (55): Tags: |
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Created: Friday 31 July 2009 @ 11:53:06 (GMT)
This group has been set up to exchange ideas, documents, workflows and news about the BioBanking Platform of NBIC in the The Netherlands. However, international members of the Concept Web Alliance or the BBMRI initiatives are very welcome to join. It will keep you updated on all technical developments regarding data harmonization and other aspects of BioBanking.
Colleagues involved in the P3G ...
2 shared items | 2 announcements Members (32): This Group has not been tagged yet! Latest announcement:: Visit Paris to discuss WikiPedia Scholar with Segolene and Denis |
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Created: Sunday 02 August 2009 @ 19:10:26 (GMT)
This group is responsible for fundraising from public resources. Please view the XLS file with currently pursued fundignopportunities. Everyone is invited to join this group and suggest funding opportunities.
1 shared item | 0 announcements Members (8): This Group has not been tagged yet! |
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Created: Monday 17 August 2009 @ 13:15:03 (GMT)
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mso-style-parent:"";...
1 shared item | 0 announcements Members (12): This Group has not been tagged yet! |
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Created: Wednesday 14 October 2009 @ 18:56:58 (GMT)
12.00
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X-NONE
MicrosoftInternetExplorer4
/* Style Definitions */
table.MsoNormalTable
{mso-style-name:"Table Normal";
mso-style-parent:"";...
0 shared items | 1 announcements Members (8): This Group has not been tagged yet! Latest announcement:: does anyone know why the extra syntax is there in text (due to word 7 ?) and how I can remove it ? |
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Created: Friday 23 October 2009 @ 07:13:45 (GMT)
This group serves as an overview of all people involved directly or indirectly in the BioAssist Program of the Netherlands Bioinformatics Centre. BioAssist-II (2009 and beyond) is headed by Barend Mons
The management team is composed as follows:
Marcel Reinders, Co-Program Leader
Rob Hooft, Chief Technology Officer (CTO)
Christine Chichester Chief Information Officer (CIO)
Marc van Driel (...
2 shared items | 1 announcements Members (10): This Group has not been tagged yet! Latest announcement:: Despautism |
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Other Groups that Barend belongs to
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Created: Friday 27 November 2009 @ 19:39:12 (GMT)
A fundamental challenge facing the Semantic Web and the Concept Web Alliance is making essential information available from triple stores. The scale of the information that users eventually want to share and access is generally larger than will fit into a single triple store. Also, it is impossible to centralize all knowledge in a CWA knowledge warehouse. For this reason, federation of data sou...
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Unique name: e Created: Saturday 24 October 2009 @ 11:20:06 (GMT)
Taskforce of BioAssist, part of NBIC II in The Netherlands, that is responsible for developing e-science tools and workflows
1 shared item | 0 announcements Members (4): This Group has not been tagged yet! |
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Created: Tuesday 22 September 2009 @ 12:29:59 (GMT)
The goal of this group is to draft a set of minimal criteria for determining the quality of data sources to be considered for indexing into triple collections/stores and design levels of ‘confidence’ for datasets.
Here is a preliminary list of components to be discussed as criteria for evaluation of data sources:
* Consistency
* Coverage/scop...
0 shared items | 0 announcements Members (2): This Group has not been tagged yet! |
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Unique name: LeidenBioSemanticsUsers Created: Wednesday 23 September 2009 @ 01:10:24 (GMT)
Group of colleagues at the Human Genetics Department of the Leiden University Medical Centre and closely collaborating groups who are interested to be prime users of new developments in BioSemantics and e-Science, and in return are willing to provide feedback and suggestions. See http://biosemantics.org for more information about the BioSemantics collaboration in the Netherlands.
3 shared items | 1 announcements Members (10): Tags: |
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Created: Thursday 17 September 2009 @ 10:57:16 (GMT)
This group is concerned with the acquisition of relevant and high quality resources to be the basis of the CWA nano-publcation triple store. Once the appropriate content has been identified, this group will actively approach the content holders and promote indexing the content into triple format and sharing it with CWA partners.
1 shared item | 0 announcements Members (3): This Group has not been tagged yet! |
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Unique name: cwa-multilinguality Created: Saturday 08 August 2009 @ 07:54:03 (GMT)
As an alliance, the CWA favours support for multiple languages. Support for multiple languages means that it needs to be possible for both the software and the data to be displayed in multiple languages.
Not everybody has English as its first language and many important medical corpora are in other languages. The CWA supports multi language support because:
it...
1 shared item | 0 announcements Members (8): Tags: |
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Created: Wednesday 19 August 2009 @ 16:38:36 (GMT)
Scope: organize the first CWA conference around a practical theme (suggestion: "Global Biobanks Harmonized").
Deliverables: conference plan / budget / invitee list
Time Frame: August 2009 (conference planned early 2010)
0 shared items | 0 announcements Members (10): This Group has not been tagged yet! |
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Created: Tuesday 18 August 2009 @ 09:11:18 (GMT)
This group is for NBICommons employees and invited partners to keep track of a common agenda and running projects.
1 shared item | 2 announcements Members (9): This Group has not been tagged yet! |
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Unique name: ConceptWebReasoning Created: Saturday 15 August 2009 @ 06:01:22 (GMT)
The Triple Browser & Reasoning (TBR) Working Group of the Concept Web Alliance confronts the major challenges associated with efficiently searching and 'creatively' reasoning with massive quantities of concept triples.
In the immediate time frame, members of the of the TBR will focus on (1) formulating precise definitions of how the Concept Web should in principle (and might in ...
1 shared item | 0 announcements Members (15): Tags: |
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Unique name: persistent ID Created: Thursday 13 August 2009 @ 15:11:47 (GMT)
Collaborate with existing initiatives and develop clear guidelines for unique Identifiers and how they relate to DOI’s URI’ etc. and an initial design of a ‘best practices’ and ‘certification plan’ at the concept level, not yet the triple level (collaboration with 2.6)
1 shared item | 0 announcements Members (11): This Group has not been tagged yet! |
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Created: Wednesday 12 August 2009 @ 14:12:31 (GMT)
The Concept Web Alliance is an organization founded to promote the semantically rich publication and dissemination of life science data and knowledge.
The basic underlying units of this knowledge will be 'triples' - concept-relationship-concept - represented using the Resource Description Framework (RDF) specification of the W3C. Technologies that are built around RDF such as RDF Triplestores,...
1 shared item | 1 announcements Members (24): Tags: Latest announcement:: Nanopublication / Format Working Group Mailing List |
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Unique name: bioassist_nl Created: Wednesday 01 August 2007 @ 13:05:51 (GMT)
NBIC's BioAssist program
BioAssist[1], organised by the Netherlands BioInformatics Centre (NBIC[2]), is a program for support and dissemination of bioinformatics tools and expertise in the Netherlands. It advocates the use of e-science standards such as web services and workflow. It is associated with the projects VL-e[3] and BioRange[4].
Links:
http://www.nbic.nl/support/BioAssist...
4 shared items | 0 announcements Members (19): Tags: |
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Unique name: hcls Created: Friday 01 May 2009 @ 17:12:56 (GMT)
The mission of the Semantic Web for Health Care and Life Sciences Interest Group (HCLSIG) is to develop, advocate for, and support the use of Semantic Web technologies for biological science, translational medicine and health care. These domains stand to gain tremendous benefit by adoption of Semantic Web technologies, as they depend on the interoperability of information from many domains and ...
8 shared items | 0 announcements Members (11): Tags: |
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Unique name: ConceptWiki Created: Wednesday 29 July 2009 @ 16:03:54 (GMT)
This CWA Working Group is concerned with the CWA ConceptWiki and its relationship to other scientific Wikis. This place on MyExperiment will serve as a common forum for the Working Group.
3 shared items | 3 announcements Members (21): Tags: |
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Created: Friday 22 August 2008 @ 10:49:27 (GMT)
Group for collaboration of Andy, Scott, and Marco.
5 shared items | 1 announcements Members (4): Tags: |
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Unique name: eScienceSupportTeam4NBIC Created: Sunday 16 March 2008 @ 22:23:11 (GMT)
This group brings together scientists with expertise in both (medical) bioinformatics and e-science. The members can give advice to bioinformaticians who want to adopt an 'e-science approach'. They want to share their expertise and experience for the application of technologies such as workflow, web/biomoby services, grid, semantic web, etcetera.
The group was founded in particular for the Du...
3 shared items | 0 announcements Members (11): Tags: |
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Unique name: biomoby Created: Tuesday 04 December 2007 @ 09:48:10 (GMT)
This is a group for those involved in the Biomoby world. Whether you are a developer or simple a user of it, you can join this group to keep up to date on the latest Biomoby news.
0 shared items | 0 announcements Members (12): Tags: |
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