It User: Achille Zappa

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Name: Achille Zappa

Joined: Monday 12 January 2009 13:41:53 (UTC)

Last seen: Tuesday 12 March 2013 08:06:44 (UTC)

Email (public): achille.zappa [at] istge.it

Website: Not specified

Location: Italy

Achille Zappa has been credited 14 times

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Occupation/Role(s): Ph.D. Student - Bioengineering

Organisation(s):

DIST - Department of Informatics, Systems and Telematics, University of Genoa ; Bioinformatics, IST - National Cancer Research Institute of Genoa

 

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Workflow M_Super_aln_boot_phylo_New (1)

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This workflow performs a generic protein sequence analysis. A multiple sequence alignment and finally a phylogenetic analysis.This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.This workflow performs "parallel" generic protein sequence ana...

Created: 2011-04-18 | Last updated: 2011-04-18

Credits: User Achille Zappa

Attributions: Workflow EMBL-EBI ClustalW2 (SOAP)

Workflow Workflow for Automated Comparative Protein... (2)

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This workflow performs "parallel" generic protein sequence analysis. In order to do that a list of known protein identifiers chosen by the biologist enters into the software to perform different multiple sequence alignments and finally phylogenetic analysis.

Created: 2010-06-29 | Last updated: 2010-08-31

Credits: User Achille Zappa

Attributions: Workflow EBI_ClustalW_alignment_tree

Workflow M_Fetch_e-T_phylo_boot - (BETA) (1)

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This workflow performs a generic protein sequence analysis. In order to do that a novel protein sequence enters into the software along with a list of known protein identifiers chosen by the biologist to perform a homology search, followed by a multiple sequence alignment and finally a phylogenetic analysis.

Created: 2010-03-10 | Last updated: 2010-03-10

Credits: User Achille Zappa User Hamish McWilliam

Workflow t_tp53_mutations_info_by_morpho - "in prog... (1)

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No description

Created: 2010-02-09 | Last updated: 2010-06-04

Credits: User Achille Zappa

Workflow Search CABRI human and animal cell lines c... (1)

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This workflow takes the cell line name and the catalogue(s) name(s) as input and retrieve the full cell line description(s) by first retrieving the cell lines' unique IDs associated with the input (done via a call to the getCellLineIdsByName web service) and then using IDs for retrieving the full cell lines descriptions (done via a call to the getCellLinesByIds web service).

Created: 2010-01-15 | Last updated: 2010-01-15

Credits: User Achille Zappa

Workflow Retrieve full descriptions of bacteria str... (1)

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This workflow retrieves the full description of bacteria strains that are available in the CABRI network services (see www.cabri.org). Input are the name of the involved CABRI catalogues (text/plain string with one catalogue name per line) and the scientific name of the desired bacteria strain (a text/plain string including genus and species separated by a blank space). Data are retrieved from the CABRI Web Services in two steps. First, all bacteria strains IDs are retrieved by using the ge...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Search TP53 Somatic Mutation catalogue by ... (1)

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This workflow takes the intron, the effect and the TP53 somatic mutation database as input and retrieves the full TP53 somatic mutation description(s) by first retrieving two different outputs: - first output: a TP53 somatic mutation database unique IDs list associated with the input intron (done via a call to the getP53MutationIdsByIntron web service) - second otput: a TP53 somatic mutation database unique IDs list associated with the input effect (done via a call to the getP53MutationIdsB...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Search TP53 Somatic Mutation catalogue by ... (1)

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This workflow takes the intron, the effect and the TP53 somatic mutation database as input and retrieves the full TP53 somatic mutation description(s) by first retrieving two different outputs and arranging them according to the boolean operators (and, or and butnot): - first output: a TP53 somatic mutation database unique IDs list associated with the input 'intron' (done via a call to the getP53MutationIdsByIntron web service) - second output: a TP53 somatic mutation database unique IDs list...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Get TP53 Mutations By Intron (1)

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This workflow takes the intron and the TP53 somatic mutation database as input and retrieve the full TP53 somatic mutation description(s) by first retrieving the TP53 somatic mutation database unique IDs associated with the input (done via a call to the getP53MutationIdsByIntron web service) and then using IDs for retrieving the full TP53 somatic mutations descriptions (done via a call to the getP53MutationsByIds web service). Special requirements on input data are: - The intron range of numb...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Search TP53 Somatic Mutation catalogue by ... (1)

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This workflow takes the exon, the effect and the TP53 somatic mutation database as input and retrieves the full TP53 somatic mutation description(s) by first retrieving two different outputs: - first output: a TP53 somatic mutation database unique IDs list associated with the input exon (done via a call to the getP53MutationIdsByExon web service) - second output: a TP53 somatic mutation database unique IDs list associated with the input effect (done via a call to the getP53MutationIdsByEffe...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Search TP53 Somatic Mutation catalogue by ... (1)

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This workflow takes the exon, the effect and the TP53 somatic mutation database as input and retrieves the full TP53 somatic mutation description(s) by first retrieving two different outputs and arranging them according to the boolean operators (�and�, �or� and �butnot�): - first output: a TP53 somatic mutation database unique IDs list associated with the input 'exon' (done via a call to the getP53MutationIdsByExon web service) - second output: a TP53 somatic mutation database u...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Get TP53 Mutations By Exon (1)

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This workflow takes the exon and the TP53 somatic mutation database as input and retrieve the full TP53 somatic mutation description(s) by first retrieving the TP53 somatic mutation database unique IDs associated with the input (done via a call to the getP53MutationIdsByExon web service) and then using IDs for retrieving the full TP53 somatic mutations descriptions (done via a call to the getP53MutationsByIds web service). Special requirements on input data are: - The exon range of numbers is...

Created: 2010-01-15

Credits: User Achille Zappa

Workflow Get TP53 Mutation Function Entries And TP... (1)

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This workflow retrieves from two different databases two distinct set of entries starting from the same inputs data (i.e. the Mutated Aminoacid encoded at the codon in which the mutation occurred, and the Codon Number where the mutation occurs). Input data: Mutant Amino Acid encoded at the codon in which the mutation occurred and Codon Number where the mutation is located. Special requirements on input data are: - the MutAA (Mutated Amino Acid) in three letters code (Gly, Ala, Trp, Phe etc.)...

Created: 2010-01-15 | Last updated: 2010-01-15

Credits: User Achille Zappa

Workflow MY_Multi_Alignment_Phylo (1)

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This workflow performs a 'multiple' multiple sequence alignment and phylogenetic analysis.

Created: 2009-11-03

Credits: User Achille Zappa

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