scufl_graph cluster_Get_pathwaysGet_pathways Get_pathways cluster_Get_pathwayssources Workflow Inputs cluster_Get_pathwayssinks Workflow Outputs cluster_sources Workflow Inputs cluster_sinks Workflow Outputs kegg_pathway_release kegg_pathway_release binfo binfo kegg_pathway_release->binfo merge_kegg_references merge_kegg_references WORKFLOWINTERNALSINK_kegg_external_gene_reference kegg_external_gene_reference merge_kegg_references->WORKFLOWINTERNALSINK_kegg_external_gene_reference merge_pathway_list_1 merge_pathway_list_1 merge_pathway_list_2 merge_pathway_list_2 merge_pathway_list_1->merge_pathway_list_2 merge_pathway_desc merge_pathway_desc remove_pathway_nulls remove_pathway_nulls merge_pathway_desc->remove_pathway_nulls merge_entrez_genes merge_entrez_genes remove_Nulls remove_Nulls merge_entrez_genes->remove_Nulls merge_genes_and_pathways merge_genes_and_pathways merge_genes_and_pathways_2 merge_genes_and_pathways_2 merge_genes_and_pathways->merge_genes_and_pathways_2 merge_uniprot_ids merge_uniprot_ids REMOVE_NULLS_2 REMOVE_NULLS_2 merge_uniprot_ids->REMOVE_NULLS_2 merge_genes_and_pathways_3 merge_genes_and_pathways_3 merge_genes_and_pathways_2->merge_genes_and_pathways_3 remove_duplicate_kegg_genes remove_duplicate_kegg_genes gene_descriptions gene_descriptions remove_duplicate_kegg_genes->gene_descriptions Get_pathwaysWORKFLOWINTERNALSOURCE_gene_ids gene_ids remove_duplicate_kegg_genes->Get_pathwaysWORKFLOWINTERNALSOURCE_gene_ids merge_reports merge_reports WORKFLOWINTERNALSINK_report report merge_reports->WORKFLOWINTERNALSINK_report WORKFLOWINTERNALSINK_merged_pathways merged_pathways merge_genes_and_pathways_3->WORKFLOWINTERNALSINK_merged_pathways regex_2 regex_2 split_for_duplicates split_for_duplicates regex_2->split_for_duplicates species species getcurrentdatabase getcurrentdatabase species->getcurrentdatabase concat_kegg_genes concat_kegg_genes concat_kegg_genes->merge_kegg_references split_gene_ids split_gene_ids concat_kegg_genes->split_gene_ids remove_uniprot_duplicates remove_uniprot_duplicates remove_uniprot_duplicates->merge_uniprot_ids split_for_duplicates->remove_duplicate_kegg_genes remove_entrez_duplicates remove_entrez_duplicates remove_entrez_duplicates->merge_entrez_genes remove_pathway_nulls_2 remove_pathway_nulls_2 merge_pathway_list_2->remove_pathway_nulls_2 merge_gene_desc merge_gene_desc remove_nulls_3 remove_nulls_3 merge_gene_desc->remove_nulls_3 genes_in_qtl genes_in_qtl mmusculus_gene_ensembl mmusculus_gene_ensembl genes_in_qtl->mmusculus_gene_ensembl mmusculus_gene_ensembl->remove_uniprot_duplicates mmusculus_gene_ensembl->remove_entrez_duplicates create_report create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report mmusculus_gene_ensembl->create_report WORKFLOWINTERNALSINK_pathway_descriptions pathway_descriptions remove_pathway_nulls->WORKFLOWINTERNALSINK_pathway_descriptions add_uniprot_to_string add_uniprot_to_string REMOVE_NULLS_2->add_uniprot_to_string Kegg_gene_ids Kegg_gene_ids add_uniprot_to_string->Kegg_gene_ids WORKFLOWINTERNALSINK_pathway_ids pathway_ids remove_pathway_nulls_2->WORKFLOWINTERNALSINK_pathway_ids WORKFLOWINTERNALSINK_gene_descriptions gene_descriptions remove_nulls_3->WORKFLOWINTERNALSINK_gene_descriptions add_ncbi_to_string add_ncbi_to_string Kegg_gene_ids_2 Kegg_gene_ids_2 add_ncbi_to_string->Kegg_gene_ids_2 remove_Nulls->add_ncbi_to_string split_gene_ids->split_for_duplicates create_report->merge_reports WORKFLOWINTERNALSINK_ensembl_database_release ensembl_database_release getcurrentdatabase->WORKFLOWINTERNALSINK_ensembl_database_release gene_descriptions->merge_gene_desc Kegg_gene_ids->concat_kegg_genes WORKFLOWINTERNALSINK_kegg_pathway_release kegg_pathway_release binfo->WORKFLOWINTERNALSINK_kegg_pathway_release Kegg_gene_ids_2->concat_kegg_genes Get_pathwaysregex regex Get_pathwayssplit_by_regex split_by_regex Get_pathwaysregex->Get_pathwayssplit_by_regex Get_pathwaysMerge_pathway_desc Merge_pathway_desc Get_pathwaysWORKFLOWINTERNALSINK_pathway_desc pathway_desc Get_pathwaysMerge_pathway_desc->Get_pathwaysWORKFLOWINTERNALSINK_pathway_desc Get_pathwaysMerge_pathways Merge_pathways Get_pathwaysconcat_ids concat_ids Get_pathwaysMerge_pathways->Get_pathwaysconcat_ids Get_pathwayspathway_desc pathway_desc Get_pathwaysMerge_pathways->Get_pathwayspathway_desc Get_pathwaysWORKFLOWINTERNALSINK_pathway_ids pathway_ids Get_pathwaysMerge_pathways->Get_pathwaysWORKFLOWINTERNALSINK_pathway_ids Get_pathwaysMerge_gene_pathways Merge_gene_pathways Get_pathwaysWORKFLOWINTERNALSINK_pathway_genes pathway_genes Get_pathwaysMerge_gene_pathways->Get_pathwaysWORKFLOWINTERNALSINK_pathway_genes Get_pathwayslister lister Get_pathwayssplit_by_regex->Get_pathwayslister Get_pathwaysconcat_gene_pathway_ids concat_gene_pathway_ids Get_pathwaysconcat_gene_pathway_ids->Get_pathwaysMerge_gene_pathways Get_pathwaysconcat_ids->Get_pathwaysconcat_gene_pathway_ids Get_pathwayspathway_desc->Get_pathwaysMerge_pathway_desc Get_pathwaysget_pathways_by_genes1 get_pathways_by_genes1 Get_pathwaysget_pathways_by_genes1->Get_pathwaysMerge_pathways Get_pathwayslister->Get_pathwaysconcat_gene_pathway_ids Get_pathwayslister->Get_pathwaysget_pathways_by_genes1 Get_pathwaysWORKFLOWINTERNALSOURCECONTROL Get_pathwaysWORKFLOWINTERNALSOURCE_gene_ids->Get_pathwayssplit_by_regex Get_pathwaysWORKFLOWINTERNALSINKCONTROL Get_pathwaysWORKFLOWINTERNALSINK_pathway_genes->merge_genes_and_pathways remove_pathway_duplicates remove_pathway_duplicates Get_pathwaysWORKFLOWINTERNALSINK_pathway_desc->remove_pathway_duplicates Get_pathwaysWORKFLOWINTERNALSINK_pathway_ids->merge_pathway_list_1 remove_pathway_duplicates->merge_pathway_desc WORKFLOWINTERNALSOURCECONTROL WORKFLOWINTERNALSOURCE_chromosome_name chromosome_name WORKFLOWINTERNALSOURCE_chromosome_name->genes_in_qtl WORKFLOWINTERNALSOURCE_qtl_start_position qtl_start_position WORKFLOWINTERNALSOURCE_qtl_start_position->genes_in_qtl WORKFLOWINTERNALSOURCE_qtl_end_position qtl_end_position WORKFLOWINTERNALSOURCE_qtl_end_position->genes_in_qtl WORKFLOWINTERNALSINKCONTROL