Get_Gene_Ids_for_HumaneSearch_2_output_CountIdListrun_eSearch_2parameters0parameters00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.WSDLActivity http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl run_eSearch net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_eSearch_2_inputterm0RetMax0db0output00net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="eSearchRequest" name="parameters" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}eSearchRequest"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="db" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;db" /><s:basetype optional="true" unbounded="false" typename="string" name="term" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;term" /><s:basetype optional="true" unbounded="false" typename="string" name="WebEnv" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;WebEnv" /><s:basetype optional="true" unbounded="false" typename="string" name="QueryKey" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;QueryKey" /><s:basetype optional="true" unbounded="false" typename="string" name="usehistory" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;usehistory" /><s:basetype optional="true" unbounded="false" typename="string" name="tool" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;tool" /><s:basetype optional="true" unbounded="false" typename="string" name="email" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;email" /><s:basetype optional="true" unbounded="false" typename="string" name="field" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;field" /><s:basetype optional="true" unbounded="false" typename="string" name="reldate" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;reldate" /><s:basetype optional="true" unbounded="false" typename="string" name="mindate" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;mindate" /><s:basetype optional="true" unbounded="false" typename="string" name="maxdate" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;maxdate" /><s:basetype optional="true" unbounded="false" typename="string" name="datetype" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;datetype" /><s:basetype optional="true" unbounded="false" typename="string" name="RetStart" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;RetStart" /><s:basetype optional="true" unbounded="false" typename="string" name="RetMax" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;RetMax" /><s:basetype optional="true" unbounded="false" typename="string" name="rettype" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;rettype" /><s:basetype optional="true" unbounded="false" typename="string" name="sort" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchRequest&gt;sort" /></s:elements></s:complextype></s:extensions> false db 0 'text/plain' false term 0 'text/plain' false WebEnv 0 'text/plain' false QueryKey 0 'text/plain' false usehistory 0 'text/plain' false tool 0 'text/plain' false email 0 'text/plain' false field 0 'text/plain' false reldate 0 'text/plain' false mindate 0 'text/plain' false maxdate 0 'text/plain' false datetype 0 'text/plain' false RetStart 0 'text/plain' false RetMax 0 'text/plain' false rettype 0 'text/plain' false sort 0 'text/plain' 0 output 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_eSearch_2_outputinput0Count00IdList11net.sf.taverna.t2.activitieswsdl-activity1.0net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="eSearchResult" name="parameters" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}eSearchResult"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="ERROR" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;ERROR" /><s:basetype optional="true" unbounded="false" typename="string" name="Count" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;Count" /><s:basetype optional="true" unbounded="false" typename="string" name="RetMax" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;RetMax" /><s:basetype optional="true" unbounded="false" typename="string" name="RetStart" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;RetStart" /><s:basetype optional="true" unbounded="false" typename="string" name="QueryKey" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;QueryKey" /><s:basetype optional="true" unbounded="false" typename="string" name="WebEnv" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;WebEnv" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="IdListType" name="IdList" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;IdList"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}Id" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="false" wrapped="true" typename="TranslationSetType" name="TranslationSet" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;TranslationSet"><s:elementtype><s:complextype optional="false" unbounded="false" typename="TranslationType" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TranslationType"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="From" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TranslationType&gt;From" /><s:basetype optional="false" unbounded="false" typename="string" name="To" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TranslationType&gt;To" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:complextype optional="true" unbounded="false" typename="TranslationStackType" name="TranslationStack" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;TranslationStack"><s:elements><s:complextype optional="true" unbounded="false" typename="TermSetType" name="TermSet" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TranslationStackType&gt;TermSet"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="Term" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TermSetType&gt;Term" /><s:basetype optional="false" unbounded="false" typename="string" name="Field" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TermSetType&gt;Field" /><s:basetype optional="false" unbounded="false" typename="string" name="Count" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TermSetType&gt;Count" /><s:basetype optional="false" unbounded="false" typename="string" name="Explode" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TermSetType&gt;Explode" /></s:elements></s:complextype><s:basetype optional="true" unbounded="false" typename="string" name="OP" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}TranslationStackType&gt;OP" /></s:elements></s:complextype><s:basetype optional="true" unbounded="false" typename="string" name="QueryTranslation" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;QueryTranslation" /><s:complextype optional="true" unbounded="false" typename="ErrorListType" name="ErrorList" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;ErrorList"><s:elements><s:arraytype optional="true" unbounded="true" wrapped="false" typename="PhraseNotFound" name="PhraseNotFound" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}ErrorListType&gt;PhraseNotFound"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}PhraseNotFound" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="FieldNotFound" name="FieldNotFound" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}ErrorListType&gt;FieldNotFound"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}FieldNotFound" /></s:elementtype></s:arraytype></s:elements></s:complextype><s:complextype optional="true" unbounded="false" typename="WarningListType" name="WarningList" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}&gt;eSearchResult&gt;WarningList"><s:elements><s:arraytype optional="true" unbounded="true" wrapped="false" typename="PhraseIgnored" name="PhraseIgnored" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}WarningListType&gt;PhraseIgnored"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}PhraseIgnored" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="QuotedPhraseNotFound" name="QuotedPhraseNotFound" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}WarningListType&gt;QuotedPhraseNotFound"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}QuotedPhraseNotFound" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="true" wrapped="false" typename="OutputMessage" name="OutputMessage" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}WarningListType&gt;OutputMessage"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.ncbi.nlm.nih.gov/soap/eutils/esearch}OutputMessage" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:elements></s:complextype></s:extensions> java.lang.String false input 0 'text/xml' 0 ERROR 0 'text/plain' 0 Count 0 'text/plain' 0 RetMax 0 'text/plain' 0 RetStart 0 'text/plain' 0 QueryKey 0 'text/plain' 0 WebEnv 0 'text/plain' 1 IdList 1 l('text/plain') 0 TranslationSet 0 'text/xml' 0 TranslationStack 0 'text/xml' 0 QueryTranslation 0 'text/plain' 0 ErrorList 0 'text/xml' 0 WarningList 0 'text/xml' net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketerm_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity "Homo sapiens"[Organism] AND "current only"[Filter] net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRetMax_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 5 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokedb_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.0net.sf.taverna.t2.activities.stringconstant.StringConstantActivity gene net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.0net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerun_eSearch_2parametersrun_eSearch_2_inputoutputrun_eSearch_2_inputtermterm_valuevaluerun_eSearch_2_inputRetMaxRetMax_valuevaluerun_eSearch_2_inputdbdb_valuevaluerun_eSearch_2_outputinputrun_eSearch_2parameterseSearch_2_output_Countrun_eSearch_2_outputCountIdListrun_eSearch_2_outputIdList This workflow gets a list of gene ids (number depending on Ret_Max_value variable) for Homo sapiens. The species may be changed according to that desired, by altering the 2010-02-04 12:43:57.261 GMT Paul Fisher 2010-02-04 12:41:11.762 GMT Get Gene Ids for Human 2010-02-04 12:42:58.100 GMT Get Gene Ids for Species 2010-02-04 12:41:27.354 GMT This workflow gets a list of gene ids (number depending on Ret_Max_value variable) for Homo sapiens. The species may be changed according to that desired, by altering the term_value string constant 2010-02-04 12:45:12.863 GMT