Version 2 (latest)
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Version created on:
19/07/10 @ 19:56:36
by:
Kendra Giesey
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Last edited on: 19/07/10 @ 20:00:00 by: Kendra Giesey
Title: Phylogenetic Study Using the Bio Extract Server
Type: BioExtract Server
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Description
This workflow, created using the BioExtract Server, contains a nucleotide query (using the NCBI Core Nucleotide Database), Blastn (against the Homo sapiens genome), Blastn (against the Mus musculus genome), the Format Conversion tool, the Fetch Translator Tool, and ClustalW. This workflow was created following the analytical steps described in the journal article "Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations" by Bjorn M Hallstrom and Axel Janke, published in BMC Evolutionary Biology. Although the workflow was based off of the study described in this article, it can be used in other experiments to find the phylogenetical distance between different genomes.
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1. Bjorn M Hallstrom and Axel Janke, Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced their earliest radiations, BMC Evolutionary Biology, 27 May 2008, Accessed at: 24 May 2010
Earliest Version:
[1] - Phylogenetic Study Using the BioExtract Server
Latest Version:
[2] - Phylogenetic Study Using the Bio Extract Server
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Non-Information Resource URI: http://www.myexperiment.org/workflows/1343
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