Retrieval_of_molecular_interactions_within_a_set_of_given_moleculesidentifiers00 A list of molecule identifier within which we are looking for molecular interactions. These identifiers can be separated using any of the following characters: - space - tabulation - line return - comma - pipe 2011-06-03 14:06:18.86 BST P12345,P33416,DSS1 2011-06-03 14:21:31.565 BST HTTP_STATUSfiltered_MITABinteractionCountINTACT_PSICQUIC$MIQL0status00responseBody00net.sf.taverna.t2.activitiesrest-activity1.3-SNAPSHOTnet.sf.taverna.t2.activities.rest.RESTActivity GET http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/query/{$MIQL} text/plain application/xml String false false true $MIQL java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 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net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokesplit_identifiersuniprotAcs0identifiers11net.sf.taverna.t2.activitiesbeanshell-activity1.3-SNAPSHOTnet.sf.taverna.t2.activities.beanshell.BeanshellActivity uniprotAcs 0 text/plain java.lang.String true identifiers 1 1 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3-SNAPSHOTnet.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeINTACT_PSICQUIC$MIQLMIQL_BuildermiqlMIQL_Builderidentifierssplit_identifiersidentifiersfilter_MITABmitabINTACT_PSICQUICresponseBodyfilter_MITABidentifierssplit_identifiersidentifierssplit_identifiersuniprotAcsidentifiersHTTP_STATUSINTACT_PSICQUICstatusfiltered_MITABfilter_MITABfilteredMITABinteractionCountfilter_MITABinteractionCount 73688e47-f606-4616-b2e8-ba4cb20794d6 2011-06-03 12:18:13.800 BST dc136d49-e7e7-43da-b2a6-305dde32a4ce 2011-06-03 13:25:19.539 BST 6bf4ddfc-97ba-4369-9dc8-fc32b22362a1 2011-06-03 13:49:36.112 BST 3dd16e5e-38a7-42e7-b853-44e30c68ebf9 2011-06-03 14:21:37.668 BST 0a58fe2b-6fe6-458f-8406-e523e324653c 2011-06-03 13:48:31.175 BST 96081b1d-38bb-4335-ad21-481dd481eb2a 2011-06-03 11:35:05.168 BST ead64aee-98a4-448c-af84-4966651c933b 2011-06-03 13:47:09.674 BST 0f9246ae-a94a-42f0-8af5-db71de721f39 2011-06-03 13:21:20.83 BST 9d16ba8e-ec73-4ca8-9125-3ff0949d9c69 2011-06-02 12:02:09.274 BST faa8e4a3-6a3f-4259-8e2a-774bee8ee4d7 2011-06-02 13:17:53.723 BST Retrieval of molecular interactions within a set of given molecules 2011-06-03 14:09:18.576 BST c2d64338-8ba3-474c-b4b9-71a930dd5eae 2011-06-03 13:33:23.323 BST f1dc95af-35e9-46f6-8690-0ae3815d8f28 2011-06-03 12:27:47.246 BST d319fe73-1ede-4db7-ab81-c6f9efe9e990 2011-06-03 13:37:50.156 BST 4e0259f8-c97b-493a-a368-51d301be499b 2011-06-03 12:19:14.598 BST 236fd3e7-0c46-4129-9dfc-287d0d4a7cfe 2011-06-02 12:05:04.26 BST 4751b7d3-6091-4397-ab1f-f71a700e6bf8 2011-06-03 14:17:35.820 BST 90092a47-5f95-4f4c-9eac-1443f527895f 2011-06-03 12:16:08.268 BST bbf5454d-8495-458a-9d97-8e985786ef6d 2011-06-02 11:53:48.215 BST f5d452ed-7d91-4e54-b174-b42611a752dc 2011-06-03 14:12:28.401 BST 801c7693-8160-4673-9e6d-b694da319b4a 2011-06-03 13:22:46.340 BST ee26e499-6835-4978-a92d-4df0f02909c5 2011-06-02 12:14:43.315 BST aaa6d71e-456a-4af3-9582-e55216253486 2011-06-03 12:23:12.645 BST 3f70550a-57e1-4045-abf9-294f44bc6bb0 2011-06-02 13:16:34.521 BST 08f42e04-7aa9-417f-8957-ee9f9e70fb6e 2011-06-03 12:24:08.563 BST 4a22813e-74a2-446e-a75a-c05c8c332224 2011-06-02 11:55:55.314 BST 5e009ddb-caaf-463d-912e-63281701dede 2011-06-03 12:30:03.239 BST cd405ce7-7af0-4e19-84e4-36565b397a3c 2011-06-03 11:19:45.693 BST fcaf04b4-2568-4e97-bb30-28824098339f 2011-06-02 11:59:29.503 BST b21d2e02-8570-45b4-bb50-26b1dff5e272 2011-06-03 13:36:07.895 BST 6f2bdaf5-01b3-4564-9529-29677fc16dc7 2011-06-03 13:54:31.16 BST c6f765ad-97af-456a-9948-ead307417f02 2011-06-03 12:11:09.580 BST 5317f7fc-9f7c-4956-9962-8a37278c2e63 2011-06-03 13:59:39.400 BST 2c58dc9c-d99a-4063-b786-62c901d1c0e0 2011-06-03 14:13:34.995 BST 886a3f08-c994-4f8f-b71e-3518c7f3c03b 2011-06-03 11:59:29.831 BST 97384676-fea3-421b-be9f-b7afbec194f5 2011-06-03 13:50:41.400 BST acc56651-4a04-4f26-a871-19887aff63ae 2011-06-02 10:00:44.583 BST 8a5542ea-b5fb-496f-9243-46f87e945212 2011-06-03 12:14:55.904 BST Samuel Kerrien (EMBL-EBI) 2011-06-03 14:08:37.682 BST 9959d1c8-1083-488d-878e-498f6f7ccddd 2011-06-03 13:52:49.506 BST 7b489ede-9871-47e3-94d9-69540821ce63 2011-06-03 12:09:35.148 BST a5dd7449-de73-4c6c-a8b7-4ef0748a870b 2011-06-03 13:46:32.122 BST 0a9a7dd0-f786-42c1-8421-d6ee05fd1f19 2011-06-02 13:15:14.218 BST ead0c7f0-ee72-4510-860d-55dcb99dbf78 2011-06-02 12:04:06.212 BST Description of the flow steps: 1. split the list of identifiers using allows separators, 2. build a MIQL query with these identifier in preparation of running a PSICQUIC request, 3. Retrieve molecular interaction from IntAct's PSICQUIC service using the generated MIQL statement, 4. filter the list of returned MITAB using the list of identifiers and only keep those lines where both participating molecules are members of the input list, 5. return the count and list of filtered MITAB lines. 2011-06-03 14:12:31.989 BST