Retrieve_Molecular_Interactions_from_PSICQUIC_Services_for_a_list_of_Protein_AccessionsselectedServices00Set the list of Services you would like to query using comma-separated values. For instance: "IntAct, BioGrid, DIP, MINT". If you want to query all the PSICQUIC Services available in the Registry type the word "all". The names of the PSICQUIC Services available can be found in ... http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=ACTIVE2011-10-05 00:24:59.733 BSTall2011-10-05 00:25:13.15 BSTlistOfProteinAccessions00P99999,Q066092011-10-05 00:28:35.809 BSTProtein accessions as CSV (Comma-separated values)2011-10-05 00:29:40.328 BSTserviceNameMolecularInteractionspsicquicUrlDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_format0firstResult0maxResults0selectedServices0MIQL_query0serviceName11MolecularInteractions11psicquicUrl11net.sf.taverna.t2.activitiesdataflow-activity1.3net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeformat_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivitytab25net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefirstResult_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivity0net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokemaxResults_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivity2000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionregex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.3net.sf.taverna.t2.activities.localworker.LocalworkerActivitystring0'text/plain'java.lang.Stringtrueregex0'text/plain'java.lang.Stringtruesplit1l('text/plain')1workfloworg.embl.ebi.escience.scuflworkers.java.SplitByRegexnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivity,net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.3net.sf.taverna.t2.activities.localworker.LocalworkerActivitystring10'text/plain'java.lang.Stringtruestring20'text/plain'java.lang.Stringtrueoutput0'text/plain'0workfloworg.embl.ebi.escience.scuflworkers.java.StringConcatnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring1_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivityidentifier:net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_formatDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_firstResultDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_maxResultsDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_selectedServicesDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_MIQL_querySplit_string_into_string_list_by_regular_expressionregexSplit_string_into_string_list_by_regular_expressionstringConcatenate_two_stringsstring1Concatenate_two_stringsstring2serviceNameMolecularInteractionspsicquicUrlRetrieve Molecular Interactions from PSICQUIC Services for a list of Protein Accessions2011-10-05 00:30:59.501 BST85735149-01a4-45a9-b5d5-db39e1e6feee2011-10-05 00:35:58.727 BSTRetrieve Molecular Interactions from PSICQUIC Services for a list of Protein Accessions in PSI-MITAB format 2011-10-05 00:32:37.563 BST628381b4-e010-487e-9e76-7ee7bd00001f2011-10-05 00:33:55.543 BSTRafael C. Jimenez2011-10-05 00:30:32.767 BSTGet_Molecular_Interactions_from_a_PSICQUIC_ServiceMIQL_query00The Molecular Interactions Query Language (MIQL) defines a way to allow more powerful and flexible queries by using a specific syntax when doing searches. More information about MIQL in ... http://code.google.com/p/psicquic/wiki/MiqlReference2011-07-22 10:00:21.635 BSTP999992011-07-21 12:17:04.39 BSTserviceRestUrl00The location of the web service. Check ... http://code.google.com/p/psicquic/wiki/PsicquicServiceProviders ... to find REST URL addresses for PSICQUIC providers. 2011-07-22 09:57:54.604 BSThttp://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/2011-07-21 12:17:36.590 BSTmaxResults0010002011-07-22 10:55:53.479 BSTInteger value that defines the maximum number of interactions to be returned. For instance, a value of maxResults=20 will limit the results to 20 interactions.2011-07-22 09:59:24.838 BSTfirstResult00Integer value that defines the first element to be shown. If the whole result set contains 100 interactions and we use firstResult=40, the first row to be returned will be the 40 2011-07-22 09:59:17.151 BST02011-07-21 12:22:36.528 BSTformat00tab252011-07-21 12:18:28.350 BSTxml25 (PSI-MIXML 2.5)
tab25 (PSI-MITAB 2.5)
count (Just the total count)2011-07-22 09:59:34.119 BSTMolecularInteractionsMolecular Interactions in PSI MI format2011-07-22 10:01:12.479 BSTpsicquicUrlPSICQUIC URL2011-07-22 10:01:31.104 BSThttp://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/query/P99999?firstResult=0&maxResults=100&format=tab252011-07-22 10:03:12.104 BSTGet_Molecular_Interactions_PSICQUICquery0serviceRestUrl0maxResults0firstResult0format0outputText00psicquicUrl00net.sf.taverna.t2.activitieslocalworker-activity1.3net.sf.taverna.t2.activities.localworker.LocalworkerActivityserviceRestUrl0'text/plain'java.lang.Stringtruequery0text/plainjava.lang.StringtruefirstResult0text/plainjava.lang.StringtruemaxResults0text/plainjava.lang.Stringtrueformat0text/plainjava.lang.StringtrueoutputText00psicquicUrl00workflownet.sourceforge.taverna.scuflworkers.ncbi.ProteinFastaWorkerUserNameHere2011-07-22 10:55:28.135 BSTnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Molecular_Interactions_PSICQUICqueryGet_Molecular_Interactions_PSICQUICserviceRestUrlGet_Molecular_Interactions_PSICQUICmaxResultsGet_Molecular_Interactions_PSICQUICfirstResultGet_Molecular_Interactions_PSICQUICformatMolecularInteractionspsicquicUrl421e43dd-9035-4572-9d1c-d1812e94b6562011-07-22 10:55:32.948 BST06bf7dca-a8d9-4571-9d30-da822af9d6ba2011-07-21 12:18:49.91 BSTcd6d933c-1e8f-4b1d-9fbf-734f7f2a2dc52011-07-22 10:02:38.260 BST9839b6b4-e9b0-40ed-a419-0ec344fa1da32011-07-21 12:28:10.354 BSTCheck the different iput parameter you could use for this workflow in ...
http://code.google.com/p/psicquic/wiki/RestAccess
Check available PSICQUIC Services in ...
http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=STATUS
More about PSICQUIC ...
http://code.google.com/p/psicquic/2011-07-22 09:53:12.823 BSTc77460b5-607a-4890-bca3-22540eeaab3a2011-07-21 12:21:19.235 BST80d7e422-37ba-4490-a924-1c7274a051f22011-07-21 12:19:40.742 BST986f0c66-1da6-47db-81f8-f17aec5766942011-07-22 10:03:13.573 BST70f6a5a5-0644-42ab-a9ec-c52fef74855f2011-07-22 10:54:46.744 BSTd1589aa2-3180-4e2b-bec6-8186c6f3c7982011-07-21 12:22:56.144 BSTGet Molecular Interactions from a PSICQUIC Service2011-07-21 14:04:21.179 BSTRafael C. Jimenez2011-07-21 13:57:41.639 BSTed2e070b-dd57-4111-b8d8-0cd8e83747882011-07-21 12:12:03.288 BSTe7c9c348-0149-4e66-84f8-71675d2e2f712011-07-21 15:02:35.223 BST8594e981-a7bd-4d76-bea5-aeaaf2530f282011-07-22 10:55:57.119 BST64c925e1-4801-45e4-b3e5-cbf70490728f2011-07-22 10:53:38.526 BSTDefine_one_query_and_retrieve_Molecular_Interactions_from_PSICQUIC_Services_registered_in_the_PSICQUIC_registry_format00tab252011-07-22 11:40:30.909 BSTxml25 (PSI-MIXML 2.5)
tab25 (PSI-MITAB 2.5)
count (Just the total count) 2011-07-22 11:40:27.503 BSTfirstResult0002011-07-22 11:39:38.129 BSTInteger value that defines the first element to be shown. If the whole result set contains 100 interactions and we use firstResult=40, the first row to be returned will be the 40 2011-07-22 11:39:32.66 BSTmaxResults0010002011-07-22 11:39:23.316 BSTInteger value that defines the maximum number of interactions to be returned. For instance, a value of maxResults=20 will limit the results to 20 interactions. 2011-07-22 11:39:15.254 BSTMIQL_query00The Molecular Interactions Query Language (MIQL) defines a way to allow more powerful and flexible queries by using a specific syntax when doing searches. More information about MIQL in ... http://code.google.com/p/psicquic/wiki/MiqlReference2011-07-22 11:38:49.176 BSTP999992011-07-22 11:39:05.129 BSTselectedServices00Set the list of Services you would like to query using comma-separated values. For instance: "IntAct, BioGrid, DIP, MINT". If you want to query all the PSICQUIC Services available in the Registry type the word "all". The names of the PSICQUIC Services available can be found in ... http://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action=ACTIVE2011-07-22 16:08:13.399 BSTall2011-07-22 15:00:08.993 BSTpsicquicUrlMolecularInteractionsserviceNameGet_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URLsoapUrl0restUrl00net.sf.taverna.t2.activitiesdataflow-activity1.3net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_Molecular_Interactions_from_a_PSICQUIC_ServiceserviceRestUrl0format0firstResult0maxResults0MIQL_query0psicquicUrl00MolecularInteractions00net.sf.taverna.t2.activitiesdataflow-activity1.3net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeList_of_PSICQUIC_services__names_and_URLs_action0url_list11name_list11net.sf.taverna.t2.activitiesdataflow-activity1.3net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeaction_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivityACTIVEnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokefilterServicesByNameurl_list1name_list1selectedServices1filtered_url_list11filtered_name_list11net.sf.taverna.t2.activitiesbeanshell-activity1.3net.sf.taverna.t2.activities.beanshell.BeanshellActivityname_list1text/plainjava.lang.Stringtrueurl_list1text/plainjava.lang.StringtrueselectedServices1text/plainjava.lang.Stringtruefiltered_url_list11filtered_name_list11workflownet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionstring0regex0split11net.sf.taverna.t2.activitieslocalworker-activity1.3net.sf.taverna.t2.activities.localworker.LocalworkerActivitystring0'text/plain'java.lang.Stringtrueregex0'text/plain'java.lang.Stringtruesplit1l('text/plain')1workfloworg.embl.ebi.escience.scuflworkers.java.SplitByRegexnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivity,net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeGet_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URLsoapUrlGet_Molecular_Interactions_from_a_PSICQUIC_ServiceserviceRestUrlGet_Molecular_Interactions_from_a_PSICQUIC_ServiceformatGet_Molecular_Interactions_from_a_PSICQUIC_ServicefirstResultGet_Molecular_Interactions_from_a_PSICQUIC_ServicemaxResultsGet_Molecular_Interactions_from_a_PSICQUIC_ServiceMIQL_queryList_of_PSICQUIC_services__names_and_URLs_actionfilterServicesByNameurl_listfilterServicesByNamename_listfilterServicesByNameselectedServicesSplit_string_into_string_list_by_regular_expressionstringSplit_string_into_string_list_by_regular_expressionregexpsicquicUrlMolecularInteractionsserviceNameb1a90553-0326-4d58-910b-35e3fbb0317b2011-07-22 16:08:39.821 BSTeb1bf2e3-997e-45bc-bbb5-ae467cace1ed2011-07-22 14:53:31.884 BSTDefine one query and retrieve Molecular Interactions from PSICQUIC Services registered in the PSICQUIC registry.2011-07-22 16:12:56.790 BSTa1c0197d-9ba5-4a99-af5c-1238a82409c42011-07-22 14:58:14.353 BSTbd185df7-03dc-4b5d-b081-0925cb8270732011-07-22 15:00:10.24 BST5c0fd577-c971-4440-94f5-51523f4c96d12011-07-22 11:38:37.301 BSTd08b05d5-399a-46bb-ab9a-6abc1ab2e0ad2011-07-22 14:50:38.837 BSTDefine one query and retrieve Molecular Interactions from PSICQUIC Services registered in the PSICQUIC registry.2011-07-22 16:12:48.853 BST1f0abc2b-b33c-4a7b-94d4-0e0474613d1b2011-07-22 16:12:58.9 BST5c683723-f5c2-4442-9d98-0e217263e1132011-07-22 16:12:49.212 BSTRafael C. Jimenez2011-07-22 11:40:47.425 BST4f0663f4-feed-4607-8dc2-62afdd0006f62011-07-22 11:43:18.721 BST41ab8deb-55b4-49da-a646-baa9612a47782011-07-22 14:46:45.196 BSTPSICQUIC_Registry__Molecular_Interactions_format00The format to use when viewing the registry. More information in ...... http://code.google.com/p/psicquic/wiki/Registry2011-07-20 10:55:13.432 BSTtxt2011-07-20 10:55:27.120 BSTaction00The action to be done. More information in ... http://code.google.com/p/psicquic/wiki/Registry2011-07-20 10:54:55.57 BSTACTIVE2011-07-20 10:54:13.370 BSTlistOfServicesservice_statusREST_Servicerestricted0format0action0responseBody00status00net.sf.taverna.t2.activitiesrest-activity1.3net.sf.taverna.t2.activities.rest.RESTActivityGEThttp://www.ebi.ac.uk/Tools/webservices/psicquic/registry/registry?action={action}&format={format}&restricted={restricted}text/plainapplication/xmlStringfalsefalsetruerestrictedjava.lang.Stringactionjava.lang.Stringformatjava.lang.Stringnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokerestricted_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivitynnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicerestrictedREST_ServiceformatREST_ServiceactionlistOfServicesservice_statusd0508e40-c978-4925-a970-6916f8afbe532011-07-20 11:02:13.670 BSTPSICQUIC Registry (Molecular Interactions)2011-07-20 11:01:34.529 BST864c3f01-6798-4ae0-be15-1f1c128d31bc2011-07-20 10:55:47.42 BSTRafael C. Jimenez2011-07-20 11:00:38.28 BSTQuery the PSICQUIC registry to retrieve information about services providing molecular interactions2011-07-20 11:00:46.622 BSTList_of_PSICQUIC_services__names_and_URLs_action00The action to be done. More information in ... http://code.google.com/p/psicquic/wiki/Registry2011-07-20 11:16:44.909 BSTACTIVE2011-07-20 11:16:49.894 BSTstatusurl_listhttp://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/psicquic2011-07-20 14:07:57.741 BSTList of URLs2011-07-20 14:08:22.725 BSTname_listList of names2011-07-20 14:08:36.647 BSTIntAct2011-07-20 14:08:45.741 BSTPSICQUIC_Registry__Molecular_Interactions_action0format0listOfServices00service_status00net.sf.taverna.t2.activitiesdataflow-activity1.3net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetNamesAndURLslistOfServices0url_list11name_list11net.sf.taverna.t2.activitiesbeanshell-activity1.3net.sf.taverna.t2.activities.beanshell.BeanshellActivitylistOfServices0text/plainjava.lang.Stringtrueurl_list11name_list11workflownet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeformat_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivitytxtnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePSICQUIC_Registry__Molecular_Interactions_actionPSICQUIC_Registry__Molecular_Interactions_formatgetNamesAndURLslistOfServicesstatusurl_listname_list22f19c38-91ff-4013-ab44-b67fe27811942011-07-20 12:28:13.156 BST4a65628f-8d12-42b1-8edc-18cfff6c66472011-07-20 12:06:49.694 BSTac698d85-dc59-406f-a404-d8185e98f8732011-07-20 11:56:24.206 BST3d88ce59-702c-48c5-8fc8-57d9689577682011-07-20 12:05:37.959 BST297f138d-72ab-49fa-ba11-5f65b607bda22011-07-20 12:15:29.729 BST83b61da1-8808-4f84-830f-2dd5ac5627db2011-07-20 12:16:22.89 BSTc327b6d6-0c98-4438-9700-a9e2605f3c3f2011-07-20 12:09:02.945 BST9ca90520-cbdd-4a55-82dc-0a83c8447a782011-07-20 12:14:59.229 BSTab66cd82-d6ec-4543-a688-e9d12cae0b5f2011-07-20 11:55:43.581 BSTfbf5f51f-4b6f-490a-acf7-3df2ab4062632011-07-20 14:08:51.272 BSTb16a6438-ff71-416a-93d5-2cea88bb656c2011-07-20 12:24:33.217 BSTe0af1c4c-5286-4819-9bfb-81fe804555952011-07-20 11:53:54.892 BSTad8f167c-61b7-457a-adc2-ca0ca09386da2011-07-20 12:10:15.274 BST5f7810ea-8617-4981-9b65-4a2b4fe12b682011-07-20 12:14:16.260 BSTf5c3a063-d7db-43c4-b824-b27beef8189b2011-07-20 12:25:29.608 BST954bfd80-8073-4f00-b84e-8f896b5348c72011-07-20 12:07:29.570 BSTe6e5ec5e-d6b5-4586-97a2-1478eac4a5472011-07-20 12:19:34.465 BSTRafael C. Jimenez2011-07-20 14:06:25.522 BST6c610965-991b-498c-adb1-6b93bc83840c2011-07-20 12:05:18.506 BSTcc0f0a1d-d804-4df9-b160-316c8a7ceb422011-07-20 11:51:28.642 BST1b5a1965-38bc-487b-bad8-08cca31a7e1a2011-07-20 11:17:15.238 BST1c089893-38f1-49b3-81d2-9dde701cff7d2011-07-20 11:56:50.269 BST3730ed9d-e91d-4365-a55d-3dcad24cef452011-07-20 11:53:34.174 BSTPSICQUIC provides access to molecular interaction databases. This workflow queries the registry and gets a list of available PSICQUIC services (names and URLs).2011-07-20 14:06:35.428 BST231ef2cc-8d5b-4fb1-8489-ceb53db9c72a2011-07-20 12:11:49.9 BSTList of PSICQUIC services (names and URLs)2011-07-20 14:06:58.209 BST6d111804-8da9-4964-b23d-c38704faff842011-07-20 12:19:02.949 BSTGet_a_PSICQUIC_REST_URL_from_a_PSICQUIC_SOAP_URLsoapUrl00PSICQUIC SOAP URL2011-07-22 11:24:03.538 BSThttp://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/psicquic2011-07-22 11:24:05.288 BSTrestUrlPSICQUIC REST URL2011-07-22 11:24:29.849 BSThttp://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/2011-07-22 11:24:13.819 BSTsoapToRestsoapUrl0soapSuffix0restSuffix0restUrl00net.sf.taverna.t2.activitiesbeanshell-activity1.3net.sf.taverna.t2.activities.beanshell.BeanshellActivitysoapUrl0text/plainjava.lang.StringtruesoapSuffix0text/plainjava.lang.StringtruerestSuffix0text/plainjava.lang.StringtruerestUrl00workflownet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesoapSuffix_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivitypsicquicnet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerestSuffix_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.3net.sf.taverna.t2.activities.stringconstant.StringConstantActivitycurrent/search/net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize1net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry1.0100050000net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesoapToRestsoapUrlsoapToRestsoapSuffixsoapToRestrestSuffixrestUrla2f95235-ee41-47fd-ac8d-4e5f6a57c1442011-07-22 11:22:15.305 BSTc12d79bc-521c-4c59-a7f0-9369644c6ac02011-07-22 11:23:49.774 BSTGet a PSICQUIC REST URL from a PSICQUIC SOAP URL2011-07-22 11:27:13.818 BSTb9585442-e589-4144-a597-a8391b8c30cc2011-07-22 11:16:59.229 BSTRafael C. Jimenez2011-07-22 11:24:38.535 BST0e1ec473-e45d-4c88-ac9f-5b158e8451f32011-07-22 11:17:32.73 BST2620c28a-ce91-48c0-984e-705b450f2e282011-07-22 11:28:24.1 BST