FetchandDisplaySpeciesspecies_name00 This input takes the name of the species that is under investigation. Note that the name is case sensitive. Additionally you should not add a newline to the end of the name 2011-11-24 16:20:24.597 GMT Limulus polyphemus 2011-11-24 16:20:33.884 GMT maxlat00 90 2011-11-24 16:21:02.135 GMT The maximum latitude of the bounding box 2011-11-24 16:20:55.70 GMT maxlong00 180 2011-11-24 16:21:16.647 GMT The maximum longitude of the bounding box 2011-11-24 16:21:12.231 GMT minlat00 -90 2011-11-24 16:21:47.951 GMT The minimum latitude of the bounding box 2011-11-24 16:21:44.110 GMT minlong00 The minimum longitude of the bounding box 2011-11-24 16:21:27.310 GMT -180 2011-11-24 16:21:30.838 GMT google_earth_command00 This input contains the command used to call Google Earth. Its content will depend upon your operating system and where Google Earth has been installed. 2011-11-24 16:19:58.434 GMT open "/Applications/Google\ Earth.app" 2011-11-24 16:20:06.958 GMT kml The KML corresponding to the occurrences within the selected bounding box 2011-11-24 16:22:34.759 GMT answermaxlat The maximum latitude selected for the bounding box for occurrences 2011-11-24 16:23:13.615 GMT 90 2011-11-24 16:24:12.743 GMT maxlong The maximum longitude selected for the bounding box for occurrences 2011-11-24 16:23:03.199 GMT 180 2011-11-24 16:24:16.311 GMT minlat The minimum latitude selected for the bounding box for occurrences 2011-11-24 16:24:00.375 GMT -90 2011-11-24 16:24:03.600 GMT minlong The minimum longitude selected for the bounding box for occurrences 2011-11-24 16:23:48.87 GMT -180 2011-11-24 16:24:08.520 GMT agreement_answercheck_bounding_boxmaxlat0maxlong0minlat0minlong0answer00maxlat00maxlong00minlat00minlong00net.sf.taverna.t2.activitieslocalworker-activity1.3net.sf.taverna.t2.activities.localworker.LocalworkerActivity maxlat 0 text/plain java.lang.String true maxlong 0 text/plain java.lang.String true minlat 0 text/plain java.lang.String true minlong 0 text/plain java.lang.String true answer 0 0 maxlat 0 0 maxlong 0 0 minlat 0 0 minlong 0 0 workflow net.sourceforge.taverna.scuflworkers.ui.AskWorker UserNameHere 2011-11-02 11:55:47.43 GMT net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFetch_occurrence_datamaxlat0maxlong0minlat0minlong0species_name0responseBody00net.sf.taverna.t2.activitiesrest-activity1.3net.sf.taverna.t2.activities.rest.RESTActivity GET http://data.gbif.org/ws/rest/occurrence/list?scientificname={species_name}&coordinatestatus=true&maxresults=100000&mode=processed&format=kml&minlatitude={minlat}&maxlatitude={maxlat}&minlongitude={minlong}&maxlongitude={maxlong} application/xml application/xml String false false true minlat java.lang.String species_name java.lang.String maxlat java.lang.String maxlong java.lang.String minlong java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeShow_in_google_earthdata0open_command0net.sf.taverna.t2.activitiesexternal-tool-activity1.3net.sf.taverna.t2.activities.externaltool.ExternalToolActivity 789663B8-DA91-428A-9F7D-B3F3DA185FD4 default local_2_2 <?xml version="1.0" encoding="UTF-8"?> <localInvocation></localInvocation> 5e9fbdcf-b107-4f64-9d3f-652048683a1c %%open_command%% data.kml 1200 1800 open_command open_command open_command false false false false false false data data.kml true false false false false false false true true 0 false net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeshow_gbif_agreementanswer00net.sf.taverna.t2.activitiesbeanshell-activity1.3net.sf.taverna.t2.activities.beanshell.BeanshellActivity answer 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.3net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokecheck_bounding_boxmaxlatmaxlatcheck_bounding_boxmaxlongmaxlongcheck_bounding_boxminlatminlatcheck_bounding_boxminlongminlongFetch_occurrence_datamaxlatmaxlatFetch_occurrence_datamaxlongmaxlongFetch_occurrence_dataminlatminlatFetch_occurrence_dataminlongminlongFetch_occurrence_dataspecies_namespecies_nameShow_in_google_earthdataFetch_occurrence_dataresponseBodyShow_in_google_earthopen_commandgoogle_earth_commandkmlFetch_occurrence_dataresponseBodyanswercheck_bounding_boxanswermaxlatcheck_bounding_boxmaxlatmaxlongcheck_bounding_boxmaxlongminlatcheck_bounding_boxminlatminlongcheck_bounding_boxminlongagreement_answershow_gbif_agreementanswer This workflow uses GBIF to search and report species occurrence data and then displays them on Google Earth. An interactive step then allows you to alter the co-ordinates of data displayed. 2011-11-27 12:40:51.669 GMT cad386c3-7304-4414-9a5f-06111638a25b 2011-11-24 16:24:26.800 GMT Alan Williams 2011-11-27 12:36:03.760 GMT FetchandDisplaySpecies 2011-11-27 12:36:24.535 GMT 8f0ab5ce-2b31-4d23-bbe5-771eb3e96a49 2011-11-02 11:56:35.262 GMT 6b074b40-be72-407c-afba-264075723844 2011-11-02 11:52:53.11 GMT 46a0125e-f04f-4daf-b5bb-7114833b6869 2011-11-24 16:42:29.837 GMT d0f3a296-0764-48fa-ae19-d173d8df024e 2011-11-02 11:54:25.375 GMT 5fa86829-18d8-4ae8-9bd2-669362d659c3 2011-11-29 15:31:01.22 GMT c70d9fcd-9aeb-47b5-a5db-54efd944313e 2011-11-02 11:27:18.463 GMT b63b4f2b-0cd6-42c2-9f2d-c8388faa0cb4 2011-11-25 10:09:04.467 GMT 99a4ac13-d879-47bd-b7ff-85c083542af1 2011-11-27 12:40:51.937 GMT b0e68fa7-59b4-430d-95d4-9c967a86b2d6 2011-11-21 12:32:20.811 GMT b17f20da-151b-4460-b614-190c985e4b63 2011-11-02 11:38:11.240 GMT