Alltext
Q8BTW2
Extract information from a Uniprot text file including PubMed, InterPro, Pfam and other related accession numbers
http://phoebus.cs.man.ac.uk:1977/axis/services/seq_analysis.parse_uniprot
To be added
http://phoebus.cs.man.ac.uk:1977/axis/services/uniprotsequence.uniprot
String[] split = input.split("\n");
Vector nonEmpty = new Vector();
for (int i = 0; i < split.length; i++)
{
String trimmed = split[i].trim();
String[] trimmedSplit = trimmed.split("=");
if (trimmedSplit.length >= 1)
{
if(trimmedSplit[0].equals("GO"))
{
nonEmpty.add(trimmedSplit[1].trim());
}
}
}
String output = "";
for (int i = 0; i < nonEmpty.size(); i++)
{
output = output + (String) (nonEmpty.elementAt(i) + "\n");
}
//AC=Q5DTJ5
//EMBL=AK220525
//EMBL=BAD90524.1
//Ensembl=ENSMUSG00000002763
//MGI=MGI:2385054
//GO=GO:0005515
//InterPro=IPR003593
//InterPro=IPR003959
//Pfam=PF00004
//SMART=SM00382
input
output