Genome_variant_to_PrnumberConversion_2_variant00 chr11:g.111959693T>A 2012-07-27 11:19:51.729 UTC Genomic variant 2012-07-27 11:20:00.166 UTC numberConversionResponse_numberConversionResultgetGeneNameResponse_getGeneNameResulttranscript_refvariant_posproteinDescriptions NM_003002.2(SDHD_i001):p.(Met91Lys) 2012-07-27 11:21:16.852 UTC numberConversionnumberConversion0numberConversionResponse00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.WSDLActivity https://mutalyzer.nl/services/?wsdl numberConversion net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenumberConversion_2build0variant0output00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity build 0 'text/plain' false variant 0 'text/plain' false gene 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="numberConversion" name="numberConversion" qname="{http://mutalyzer.nl/2.0/services}numberConversion"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="build" qname="{http://mutalyzer.nl/2.0/services}numberConversion&gt;build" /><s:basetype optional="false" unbounded="false" typename="string" name="variant" qname="{http://mutalyzer.nl/2.0/services}numberConversion&gt;variant" /><s:basetype optional="true" unbounded="false" typename="string" name="gene" qname="{http://mutalyzer.nl/2.0/services}numberConversion&gt;gene" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenumberConversionResponseinput0numberConversionResult11net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false numberConversionResult 1 l('text/plain') 1 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="numberConversionResponse" name="numberConversionResponse" qname="{http://mutalyzer.nl/2.0/services}numberConversionResponse"><s:elements><s:arraytype optional="true" unbounded="false" wrapped="true" typename="stringArray" name="numberConversionResult" qname="{http://mutalyzer.nl/2.0/services}numberConversionResponse&gt;numberConversionResult"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokebuild_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity hg19 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetGeneNamegetGeneName0getGeneNameResponse00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.WSDLActivity https://mutalyzer.nl/services/?wsdl getGeneName net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetGeneName_2build0accno0output00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity build 0 'text/plain' false accno 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getGeneName" name="getGeneName" qname="{http://mutalyzer.nl/2.0/services}getGeneName"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="build" qname="{http://mutalyzer.nl/2.0/services}getGeneName&gt;build" /><s:basetype optional="false" unbounded="false" typename="string" name="accno" qname="{http://mutalyzer.nl/2.0/services}getGeneName&gt;accno" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetGeneNameResponseinput0getGeneNameResult00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false getGeneNameResult 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getGeneNameResponse" name="getGeneNameResponse" qname="{http://mutalyzer.nl/2.0/services}getGeneNameResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="getGeneNameResult" qname="{http://mutalyzer.nl/2.0/services}getGeneNameResponse&gt;getGeneNameResult" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeBeanshellvariant_HGVS0transcript_ref00variant_pos00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity variant_HGVS 0 text/plain java.lang.String true transcript_ref 0 0 variant_pos 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerunMutalyzerrunMutalyzer0runMutalyzerResponse00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.WSDLActivity https://mutalyzer.nl/services/?wsdl runMutalyzer net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerunMutalyzerResponseinput0runMutalyzerResult00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false runMutalyzerResult 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runMutalyzerResponse" name="runMutalyzerResponse" qname="{http://mutalyzer.nl/2.0/services}runMutalyzerResponse"><s:elements><s:complextype optional="true" unbounded="false" typename="MutalyzerOutput" name="runMutalyzerResult" qname="{http://mutalyzer.nl/2.0/services}runMutalyzerResponse&gt;runMutalyzerResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="referenceId" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;referenceId" /><s:basetype optional="true" unbounded="false" typename="string" name="genomicDescription" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;genomicDescription" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceGi" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceGi" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="RawVariantArray" name="rawVariants" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;rawVariants"><s:elementtype><s:complextype optional="false" unbounded="false" typename="RawVariant" name="" qname="{http://mutalyzer.nl/2.0/services}RawVariant"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="description" qname="{http://mutalyzer.nl/2.0/services}RawVariant&gt;description" /><s:basetype optional="false" unbounded="false" typename="string" name="visualisation" qname="{http://mutalyzer.nl/2.0/services}RawVariant&gt;visualisation" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="origMRNA" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origMRNA" /><s:basetype optional="true" unbounded="false" typename="string" name="altProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;altProtein" /><s:basetype optional="true" unbounded="false" typename="integer" name="errors" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;errors" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceAccession" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceAccession" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceVersion" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceVersion" /><s:basetype optional="true" unbounded="false" typename="string" name="mutated" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;mutated" /><s:basetype optional="true" unbounded="false" typename="string" name="mutatedMRNA" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;mutatedMRNA" /><s:basetype optional="true" unbounded="false" typename="string" name="origCDS" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origCDS" /><s:basetype optional="true" unbounded="false" typename="integer" name="warnings" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;warnings" /><s:basetype optional="false" unbounded="false" typename="string" name="molecule" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;molecule" /><s:basetype optional="true" unbounded="false" typename="string" name="newCDS" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;newCDS" /><s:basetype optional="true" unbounded="false" typename="string" name="chromDescription" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;chromDescription" /><s:basetype optional="true" unbounded="false" typename="string" name="newProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;newProtein" /><s:basetype optional="false" unbounded="false" typename="string" name="sourceId" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceId" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="stringArray" name="proteinDescriptions" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;proteinDescriptions"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="false" wrapped="true" typename="SoapMessageArray" name="messages" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;messages"><s:elementtype><s:complextype optional="false" unbounded="false" typename="SoapMessage" name="" qname="{http://mutalyzer.nl/2.0/services}SoapMessage"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="errorcode" qname="{http://mutalyzer.nl/2.0/services}SoapMessage&gt;errorcode" /><s:basetype optional="false" unbounded="false" typename="string" name="message" qname="{http://mutalyzer.nl/2.0/services}SoapMessage&gt;message" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="summary" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;summary" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="stringArray" name="transcriptDescriptions" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;transcriptDescriptions"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="origProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origProtein" /><s:basetype optional="true" unbounded="false" typename="string" name="original" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;original" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerunMutalyzerResponse_runMutalyzerResultinput0proteinDescriptions11net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity input 0 'text/xml' java.lang.String false referenceId 0 'text/plain' 0 genomicDescription 0 'text/plain' 0 sourceGi 0 'text/plain' 0 rawVariants 0 'text/xml' 0 origMRNA 0 'text/plain' 0 altProtein 0 'text/plain' 0 errors 0 'text/plain' 0 sourceAccession 0 'text/plain' 0 sourceVersion 0 'text/plain' 0 mutated 0 'text/plain' 0 mutatedMRNA 0 'text/plain' 0 origCDS 0 'text/plain' 0 warnings 0 'text/plain' 0 molecule 0 'text/plain' 0 newCDS 0 'text/plain' 0 chromDescription 0 'text/plain' 0 newProtein 0 'text/plain' 0 sourceId 0 'text/plain' 0 proteinDescriptions 1 l('text/plain') 1 messages 0 'text/xml' 0 summary 0 'text/plain' 0 transcriptDescriptions 1 l('text/plain') 1 origProtein 0 'text/plain' 0 original 0 'text/plain' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="true" unbounded="false" typename="MutalyzerOutput" name="runMutalyzerResult" qname="{http://mutalyzer.nl/2.0/services}runMutalyzerResponse&gt;runMutalyzerResult"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="referenceId" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;referenceId" /><s:basetype optional="true" unbounded="false" typename="string" name="genomicDescription" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;genomicDescription" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceGi" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceGi" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="RawVariantArray" name="rawVariants" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;rawVariants"><s:elementtype><s:complextype optional="false" unbounded="false" typename="RawVariant" name="" qname="{http://mutalyzer.nl/2.0/services}RawVariant"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="description" qname="{http://mutalyzer.nl/2.0/services}RawVariant&gt;description" /><s:basetype optional="false" unbounded="false" typename="string" name="visualisation" qname="{http://mutalyzer.nl/2.0/services}RawVariant&gt;visualisation" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="origMRNA" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origMRNA" /><s:basetype optional="true" unbounded="false" typename="string" name="altProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;altProtein" /><s:basetype optional="true" unbounded="false" typename="integer" name="errors" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;errors" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceAccession" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceAccession" /><s:basetype optional="true" unbounded="false" typename="string" name="sourceVersion" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceVersion" /><s:basetype optional="true" unbounded="false" typename="string" name="mutated" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;mutated" /><s:basetype optional="true" unbounded="false" typename="string" name="mutatedMRNA" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;mutatedMRNA" /><s:basetype optional="true" unbounded="false" typename="string" name="origCDS" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origCDS" /><s:basetype optional="true" unbounded="false" typename="integer" name="warnings" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;warnings" /><s:basetype optional="false" unbounded="false" typename="string" name="molecule" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;molecule" /><s:basetype optional="true" unbounded="false" typename="string" name="newCDS" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;newCDS" /><s:basetype optional="true" unbounded="false" typename="string" name="chromDescription" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;chromDescription" /><s:basetype optional="true" unbounded="false" typename="string" name="newProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;newProtein" /><s:basetype optional="false" unbounded="false" typename="string" name="sourceId" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;sourceId" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="stringArray" name="proteinDescriptions" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;proteinDescriptions"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:arraytype optional="true" unbounded="false" wrapped="true" typename="SoapMessageArray" name="messages" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;messages"><s:elementtype><s:complextype optional="false" unbounded="false" typename="SoapMessage" name="" qname="{http://mutalyzer.nl/2.0/services}SoapMessage"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="errorcode" qname="{http://mutalyzer.nl/2.0/services}SoapMessage&gt;errorcode" /><s:basetype optional="false" unbounded="false" typename="string" name="message" qname="{http://mutalyzer.nl/2.0/services}SoapMessage&gt;message" /></s:elements></s:complextype></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="summary" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;summary" /><s:arraytype optional="true" unbounded="false" wrapped="true" typename="stringArray" name="transcriptDescriptions" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;transcriptDescriptions"><s:elementtype><s:basetype optional="false" unbounded="false" typename="string" name="" qname="{http://www.w3.org/2001/XMLSchema}string" /></s:elementtype></s:arraytype><s:basetype optional="true" unbounded="false" typename="string" name="origProtein" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;origProtein" /><s:basetype optional="true" unbounded="false" typename="string" name="original" qname="{http://mutalyzer.nl/2.0/services}MutalyzerOutput&gt;original" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokerunMutalyzer_2variant0output00net.sf.taverna.t2.activitieswsdl-activity1.4net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity variant 0 'text/plain' false output 0 'text/xml' 0 <s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="runMutalyzer" name="runMutalyzer" qname="{http://mutalyzer.nl/2.0/services}runMutalyzer"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="variant" qname="{http://mutalyzer.nl/2.0/services}runMutalyzer&gt;variant" /></s:elements></s:complextype></s:extensions> net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenumberConversionnumberConversionnumberConversion_2outputnumberConversion_2buildbuild_valuevaluenumberConversion_2variantnumberConversion_2_variantnumberConversionResponseinputnumberConversionnumberConversionResponsegetGeneNamegetGeneNamegetGeneName_2outputgetGeneName_2buildbuild_valuevaluegetGeneName_2accnoBeanshelltranscript_refgetGeneNameResponseinputgetGeneNamegetGeneNameResponseBeanshellvariant_HGVSnumberConversionResponsenumberConversionResultrunMutalyzerrunMutalyzerrunMutalyzer_2outputrunMutalyzerResponseinputrunMutalyzerrunMutalyzerResponserunMutalyzerResponse_runMutalyzerResultinputrunMutalyzerResponserunMutalyzerResultrunMutalyzer_2variantnumberConversionResponsenumberConversionResultnumberConversionResponse_numberConversionResultnumberConversionResponsenumberConversionResultgetGeneNameResponse_getGeneNameResultgetGeneNameResponsegetGeneNameResulttranscript_refBeanshelltranscript_refvariant_posBeanshellvariant_posproteinDescriptionsrunMutalyzerResponse_runMutalyzerResultproteinDescriptions cda75cb1-02d6-4cd8-9b62-f4ac16a2bdef 2012-07-27 10:43:44.325 UTC 05172329-0cdf-4c2b-971f-6b96d77eacbd 2012-07-27 10:44:37.739 UTC Reports protein change, given a genomic variant, using mutalyzer 2012-07-27 11:19:14.383 UTC 5600c4dd-3bfe-448e-9017-0bf7863d8515 2012-07-27 11:02:28.284 UTC 99d861df-5f25-41f4-872e-5c2401a8b642 2012-07-27 10:47:42.704 UTC df61d611-d8a5-44e3-8bc5-e0647191296c 2012-07-27 11:17:41.827 UTC be6b5d18-b8a5-46eb-96a3-90f218461c78 2012-07-27 11:21:17.984 UTC 88c77166-ba43-4ec9-a643-c7c4743ec38c 2012-07-27 10:30:56.63 UTC c60735e3-9e9f-4d1b-962f-c780f13dbdae 2012-07-27 11:12:37.688 UTC fec8a42a-6d1c-45c1-ae4f-363a20a8c580 2012-07-27 11:19:14.530 UTC adf5a68d-6154-4000-9b89-3cfd86823b23 2012-07-27 11:20:04.523 UTC eace3d9b-3dcb-45f5-bfae-fe2f1eb0ccef 2012-07-27 10:50:39.486 UTC Genome variant to Protein change 2012-07-27 11:18:31.489 UTC d4f53cf0-bdf9-40d5-8dc6-c4a70699b7b6 2012-07-27 10:22:05.954 UTC 3d84f2d1-03b2-4c2c-ac06-0db90af8dff2 2012-07-27 10:26:12.74 UTC 357889e9-3d11-42a9-83fa-d46e3f245683 2012-07-27 11:13:43.813 UTC Mike Cornell and Helen Hulme 2012-07-27 11:18:20.372 UTC 4aeb5aef-5ea0-4241-8271-5824055d16a6 2012-07-27 10:46:52.380 UTC 0a5ca2bb-a80f-4236-8c03-e281de51b9cb 2012-07-27 11:09:43.412 UTC