This workflow builds up a subgraph of the Gene Ontology (http://www.geneontology.org) to show the context for a supplied term or terms. It shows this context by colouring all ancestors of the term, all children and all siblings. By default, ancestors of the supplied term or terms are coloured orange, siblings purple and direct children teal. Other terms appear in the default wheat colour.
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http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
getChildren
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
getDot
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
getAncestors
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
markTerm
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
getParents
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
addTerm
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
markTerm
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
markTerm
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
addTerm
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
destroySession
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
createSession
http://www.ebi.ac.uk/collab/mygrid/service1/goviz/GoViz.jws?wsdl
getChildren
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The term for which to display context within the Gene Ontology. An example is the term for vision, GO:0007601
text/x-graphviz
A text file containing the dot coded representation of the GO subgraph generated by this workflow. To see the graph you'll have to run it through the 'dot' tool, part of AT&T's graphviz package.
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getresults
finish
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add
markAncestors
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addImmediateChildren
colourChildren
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colourChildren
getresults
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markAncestors
colourInputTerm
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colourInputTerm
getresults
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Running