Define_with_PartitioMSA_fasta00
>ABY27676/1-453 ABY27676
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------TTAATATTAGGA
GCTCCAGATATAGCTTTTCCTCGAATAAATAATCTTAGTTTTTGGTTGCTTCCTCCTTCTTTGATTTTATTA
ATAATTTCTTCAATAGTGGAGATAGGGGTTGGGGCGGGGTGAACTATTTATCCTCCTTTATCGGGTAGTCTA
GGTCATTCAGGGGTTTCAGTAGATTTAGCTATTTTTAGCTTACATTTGGCGGGAGCTTCTTCAATTATAGGA
GCAATTAATTTTATTTCCACTATTTTAAATATACGTTCAGTTGGGATATCTATAGATAAGGTACCTTTATTT
GTGTGATCTGTATTAGTTACTGCTGTTTTATTATTATTATCTTTACCAGTTTTAGCCTGGGGTATTACGATA
TTATTAACAGATCGAAATTTTAACACTTCTTTTTTTGACCCTGCGGGTGGAGGTGATCCAATTTTATTTCAA
CATCTTTTT
>ADW61587/1-657 ADW61587
ACGTTATATTTAATATTTGGGGCTTGAGCTGCTATAGTAGGAACAGCCATAAGAGTATTAATTCGAATTGAA
TTAGGTCAACCTGGGAGGTTTATTGGGGATGATCAATTATATAATGTAATCGTTACTGCTCATGCATTTGTT
ATAATTTTTTTTATAGTAATACCTATTTTGATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGC
GCTCCTGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGCTACTCCCTCCTTCATTATTTTTATTA
ATTATTTCTTCTATAGTAGAAATGGGAGTGGGGGCAGGATGGACGGTTTATCCTCCTTTAGCTAGTTTAGAG
GGCCATGCTGGCAGGTCAGTGGATTTTGCTATTTTTTCTTTACATTTAGCGGGGGCCTCCTCTATTATGGGG
GCTATTAATTTTATTTCTACTATTATTAATATACGATCGCATGGAATAACTATAGAAAAAGTACCTTTATTT
GTATGATCAGTATTGATTACTGCTGTATTATTATTATTATCACTTCCAGTATTGGCGGGGGCTATCACAATA
TTATTAACTGATCGAAATTTTAATACTTCGTTTTTTGACCCTTCAGGAGGGGGGGATCCAATCCTTTTCCAA
CATTTATTT
>AEE92862/1-657 AEE92862
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATGGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>AEC60810/1-657 AEC60810
ACTTTGTATTTATTGTTTGGTATTTGATCTGCTATAATGGGAACGGCAATAAGAGTGATTATTCGAATTGAA
TTAGGTCAAGTTGGAAGATTGTTGGGTGATGATCATTTATATAATGTAATTGTAACAGCACATGCTTTGGTT
ATGATTTTTTTTATAGTTATACCGATTTTGATTGGTGGATTTGGAAATTGAATAGTTCCTTTGATGTTAGGT
GCTCCAGATATAGCATTCCCACGTATAAATAATTTGAGATTTTGATTGCTTCCTCCATCATTATTTTTGTTA
TTATTATCTTCTTTAACAGATGTAGGGGTTGGAGCCGGGTGAACTATTTATCCTCCTTTATCCTCTGGGGTT
GGACATAGAGGGGGGGGGATGGATTTTGCTATTTTTTCTTTACATTTAGCAGGAGCTTCATCTATTATAGGG
GCGATTAATTTTATTACAACAATTATTAATATGCGAAGATTTGGAATAACAATAGAACGTGTACCTTTATTT
GTGTGATCAGTTCTTATTACTACTATTTTATTATTGCTTTCTTTACCTGTATTGGCTGGTGCTATTACTATA
TTGTTGACTGATCGAAATTTCAATACTTCTTTTTTTGATCCTGCTGGAGGTGGTGATCCTATTTTGTTTCAA
CATTTATTT
>AEE92861/1-633 AEE92861
------------------------TGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAATATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>AEE92860/1-648 AEE92860
---------TTTGTTTTTGGAGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADD09384/1-555 ADD09384
------------------------------------------------------------------------
------------------------------TATCAGCTATACAATGTATTAATTACCGCTCATGCTATAATT
ATGGTATTTTTCATGATTATGCCAGCTTTATTTGGTGGATTTGGTAATTACTTTGTACCAATTTTAATAGGT
GCCCCGGATATGGCTTTTCCTAGGCTAAATAATATAAGTTTTTGGCTACTTGTCCCTGCTTTTATATTATTA
ATGCTGTCAGGTTTGGTTGATGGAGGAGCTGGTACTGGCTGGACACTGTATCCTCCTCTAAGTAGTATAGTA
GGGCATCCTGGCGCTGCTGTCGATATGGCTATTTTAAGCTTACATCTTACAGGGCTTTCCTCCATTCTTGGT
TCAATTAATATGATTGTCACTATCTTTAATATGAGAACTGATGGTATGGGGTTATTTGAAATGCCCTTATTT
GTTTGGTCAATTTTGGTTACTGCCTTCTTGCTGATACTAGCAATTCCTGTGTTAGGGGGTGCAATAACCATG
TTACTGACTGATCGAAATTTTGGTACTACTTTTTTCAAGCCTGATGGTGGCGGAGATCCAGTGTTATTTCAG
CATTTATTT
>ADJ82639/1-645 ADJ82639
ACTTTATATTTAATGTTTGGGGTTTGGTCAGCTATAATAGGAACTGCTATAAGAGTATTAATTCGAATGGAA
TTAGGGAATCCTGGTAGATTGTTAGGTGATGATCATTTGTATAATGTTATAGTTACTGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTAATGCCTATTCTTATTGGAGGTTTTGGAAATTGATTAGTTCCTTTAATATTAGGA
GCTCCAGATATATCATTTCCTCGAATAAATAATCTTTCTTTTTGATTATTACCTCCTTCTTTATTTTTGTTA
TCTATATCTTCTATAGTAGAAATAGGAGTTGGGGCTGGGTGAACTGTTTATCCTCCTTTAGCGTCTACAGTT
GGGCACATAGGAAATTCAATAGATTTTGCTATTTTTTCTCTTCATTTAGCTGGAGCTTCTTCTATTATAGGA
GCTGTAAATTTTATTTCTACCATTATTAATATACGAATATTAGGAATATCTATAGAGAAGGTTCCTCTTTTT
GTTTGATCAGTTTTAATTACAGCAGTATTATTATTACTTTCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACAGATCGAAATTTTAATACTTCTTTTTTTGATCCTGCTGGGGGAGGAGATCCTAATTTATTT---
---------
>ADQ21240/1-648 ADQ21240
AGATTATATTTTGTTTTTGGGGCTTGAGCTGCTATAGTAGGAACAGCAATAAGAGTATTAATTCGTGTTGAG
TTGGGACAAACTGGTAGTTTGTTAGGGGATGATCAGTTGTATAATGTTATTGTTACGGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTTATGCCTATTTTAATTGGGGGTTTTGGAAATTGGCTGATTCCACTAATACTAGGA
GCTCCGGATATAGCTTTCCCTCGTATAAATAATTTGAGATTTTGGCTTTTACCCCCTTCTTTATTATTACTG
TTTATTTCAAGCATAGATGAGATAGGAGTGGGGGCGGGATGAACGGTTTACCCCCCTCTTGCCTCTTTAGAG
GGACATTCTGGTAGTTCAGTAGATTTTGCTATTTTTTCTTTACACTTAGCTGGAGCGTCTTCTATTATAGGG
GCTATTAATTTTATTTCCACAATTTTGAATATACGGGGTTATGGAATATCTATAGAAAAAGTACCTTTATTT
GTTTGGTCCGTGTTAATTACAGCTGTATTATTATTGTTATCTCTTCCTGTGTTAGCTGGGGCTATCACAATA
TTACTGACGGATCGTAATTTTAATACTTCATTTTTTGATCCTTGTGGGGGGGGGGATCCTGTTTTGTTTCAA
---------
>AEE92882/1-657 AEE92882
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATTGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>ADW58691/1-657 ADW58691
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTATTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGTTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATGGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ADW58631/1-657 ADW58631
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTACTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGCTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATAGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ACM89220/1-657 ACM89220
ACTTTATATTTTTTATTTGGTACTTGATCAGCAATAATTGGTACAGCAATAAGTGTTTTAATTCGTGTTGAA
CTAGGATTTTCTGGAAGATTTTTAGGTGATGATCATTTATATAATGTAATTGTTACTGCTCATGCTTTTATT
ATAATTTTTTTTATAGTTATACCTATTTTAATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAAGA
GCTCCAGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGTTACTACCTCCTTCGTTATTATTGTTA
TTTATTTCTTCTATGGTTGAAATCGGAGTTGGAGCAGGGTGGACTATTTATCCTCCTTTATCTTCTTCTGTG
GGTCATTCTGGTGCATCTATGGATTTTGCAATTTTTTCTCTTCATTTAGCTGGTGCTTCTTCTATTATAGGT
GCTATTAATTTTATTTCAACAATTATTAATATACGACCTTATGGTATAAGAATAGAAAAGATTCCTTTATTT
GTATGATCTGTATTAATTACAGCTGTCTTATTATTATTATCATTACCAGTATTAGCTGGGGCTATTACTATA
CTTTTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCAGCTGGGGGTGGGGATCCAATTTTATTTCAG
CATTTATTT
>AEE92867/1-642 AEE92867
---------------TTTGGGGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADH12119/1-645 ADH12119
ACTTTATACTTGGTTTTTGGTGCTTGAGCGGCTATGGTTGGAACTGCAATAAGTGTTTTAATTCGAATTGAG
TTGGGGCAATCTGGTAGATTTATGGGAGATGATCAGTTGTATAATGTTATTGTAACTGCTCATGCTTTTGTT
ATAATTTTTTTTATGGTTATGCCTATTTTGATTGGGGGCTTTGGTAATTGACTGGTTCCTTTGATGTTGGGG
GCTCCTGATATGGCTTTTCCTCGCATGAATAATTTAAGGTTTTGATTATTGCCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATGGTGGAAATAGGGGTTGGGGCTGGTTGAACGATCTACCCTCCTTTAGCGTCTCTAGAA
GGACATTCAGGAAGTTCGGTTGATTTTGCCATTTTTTCTTTGCATTTGGCTGGGGCCTCTTCTATTATAGGG
GCTATTAATTTTATTTCTACAATTTTGAATATACGGTCTTATGGGATGTCTATGGAAAAAGTTCCTTTGTTT
GTTTGGTCGGTTTTAATTACTGCTGTTTTGCTCCTATTATCACTTCCGGTTTTAGCTGGGGCTATCACTATG
TTATTAACTGATCGAAATTTTAATACATCGTTTTTTGATCCTTCGGGGGGAGGGGATCCTATTTTTTTT---
---------
2013-02-19 10:49:56.589 UTC
Multiple Sequence Alignment in Fasta format
2013-02-19 10:49:24.341 UTC
PossiblePartition00
Partitioning of the MSA using nexus/raxml syntax
2013-02-19 10:49:04.53 UTC
Gene1_pos1 = 1-657\3;
Gene1_pos2 = 2-657\3;
Gene1_pos3 = 3-657\3;
2013-02-19 10:48:53.331 UTC
Plot
Result of the Posterior Predictive test. Histogram of the distribution of the complexities (log of sum of sites entropy or maximal possible loglikelihood score) of the simulated data using the posterior distribution parameters compared with observed data complexity. The 1-alpha high posterior density of the distribution show the region where simulate data complexity match the observed one. Larger observed complexity indicates model too simplistic, while the contrary indicates overparametrization of the model.
2013-02-19 10:52:20.291 UTC
newickTree
small xml with tag res with one or more tag tree each one with a body that contain a tree in netwick format.
each tree represent the consensus for a given partition of group of partition in the same order that are cited in the nexus input file of mrbayes
2013-02-19 10:51:48.519 UTC
<res><tree>(ADD09384_1_555_ADD09384:1.18452,ABY27676_1_453_ABY27676:0.16674,(ACM89220_1_657_ACM89220:0.16271,(ADJ82639_1_645_ADJ82639:0.15654,(ADW58631_1_657_ADW58631:0.00298,ADW58691_1_657_ADW58691:0.00584)1.00:0.07383)0.98:0.04988,(ADW61587_1_657_ADW61587:0.10163,(ADH12119_1_645_ADH12119:0.14993,ADQ21240_1_648_ADQ21240:0.15645)0.90:0.06174)0.89:0.07555,(AEC60810_1_657_AEC60810:0.13396,((AEE92862_1_657_AEE92862:0.00180,AEE92882_1_657_AEE92882:0.00294)0.93:0.01820,(AEE92860_1_648_AEE92860:0.00172,AEE92867_1_642_AEE92867:0.00260,AEE92861_1_633_AEE92861:0.00326)0.85:0.01568)1.00:0.18625)0.99:0.14972)0.63:0.13345);</tree></res>
2013-02-19 10:51:25.542 UTC
Geoks
Restul of the GeoKS test of convergence. XML format
2013-02-20 12:54:07.319 UTC
<result><success>True</success><burnin>16</burnin><pvalues>0.962205</pvalues></result>
2013-02-20 12:54:16.872 UTC
DefineAndSubmit_Phylogenetic_inferPossiblePartition0MSA_fasta0JobID66NexusFileName00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRetrieveANDValidatePhylogenetic_inferJobID0NexusFileName0GeoKS_Result22newickTree55Plot77net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDefineAndSubmit_Phylogenetic_inferPossiblePartitionDefineAndSubmit_Phylogenetic_inferMSA_fastaRetrieveANDValidatePhylogenetic_inferJobIDRetrieveANDValidatePhylogenetic_inferNexusFileNamePlotnewickTreeGeoks
0a9f163f-c9f6-482e-9e48-76b1971e6520
2013-02-20 12:54:19.239 UTC
ac29b67c-ac1b-430a-afda-982bce0fc451
2013-02-20 14:14:06.10 UTC
Phylogenetic inference with MrBayes. The the model of evolution is defined with the help of PartitionFinder, inference and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test)
2013-02-20 14:13:46.513 UTC
b80541d1-48a8-4314-9512-98cb5fe1c276
2013-02-20 12:52:49.895 UTC
c588ab33-7f5a-459a-8fad-f9d4bac96b63
2013-02-20 11:58:19.43 UTC
2813a541-7010-4115-84db-39c44a20c425
2013-02-20 14:17:55.124 UTC
209b2582-51a0-46a2-a9c0-95d84a951f78
2013-02-20 12:20:20.688 UTC
cd487d97-579b-41f4-8bc6-88371a1703df
2013-02-19 10:52:29.614 UTC
saverio vicario
giacinto donvito
bachir balech
2013-02-19 10:54:10.67 UTC
5dfb9d2c-95e6-415d-8c9f-847ec107140e
2013-02-19 16:37:16.674 UTC
2e735a0a-988b-4bba-9e5d-f02944cd0d24
2013-02-19 11:04:22.96 UTC
03d8d882-866c-4a86-85f1-1c0a266fcfa1
2013-02-19 17:17:37.373 UTC
c5490cfd-6edc-4a98-9707-0156b575bc8f
2013-02-20 08:09:23.860 UTC
Define with PartitionFinder, infer and validate Phylogeny - short run
2013-02-20 14:17:52.154 UTC
fdebe370-df01-45ee-b953-d307ea7f7611
2013-02-20 12:57:15.288 UTC
46ead065-bb6f-41d4-af8c-bb7ccffc75e3
2013-02-19 10:50:28.376 UTC
a0fabd4f-2e8f-4a2d-bc13-734d4245e0b4
2013-03-25 14:41:42.947 UTC
28272e3a-e84b-43b1-86d1-719387da9aa6
2013-02-20 09:36:45.90 UTC
b65fb5fb-4c3b-40ed-a1e5-d2885cb2a39b
2013-02-20 12:18:35.247 UTC
Workflow1File_name00InputBody00REST_Service_responseBodyREST_Service_statusREST_Service_redirectionREST_Servicefile_name0inputBody0responseBody00status00redirection00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
PUT
http://testjst.ba.infn.it/openacces/{file_name}
application/xml
application/xml
String
false
true
false
false
true
file_name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Servicefile_nameREST_ServiceinputBodyREST_Service_responseBodyREST_Service_statusREST_Service_redirection
b418f0df-28b8-497e-ac5d-a4b478911bd0
2012-05-01 08:36:38.8 UTC
8d4c37f0-a10b-465e-81aa-1c09938a3473
2012-05-01 08:37:47.922 UTC
aff47fd7-0af5-47c0-afc2-a6f5ab27b564
2012-04-30 14:16:40.142 UTC
517fa4a1-06ee-4bd7-980e-5f63e13c2fb2
2012-05-04 08:52:59.585 UTC
0ad720e2-8bbd-4aed-96f5-756381173980
2012-04-24 12:19:06.97 UTC
30603428-46fc-4411-9a3a-d5aad4146001
2012-05-10 07:16:32.601 UTC
288673db-e11c-4f6a-be9c-57b0c212979d
2012-04-30 14:48:27.139 UTC
3008dc09-c8be-45bc-918b-7bb95f63c51d
2012-05-24 16:25:38.215 UTC
d6bd51d4-54a3-4e41-ab79-ee29ecca40cf
2012-05-03 15:34:45.183 UTC
d1b49247-0c82-443c-acb1-bab1044296f4
2012-04-30 14:42:33.401 UTC
24d62224-217d-46d0-a08a-06b0d60caec4
2012-05-02 07:59:24.107 UTC
ce6b1735-eb91-4d53-8e9b-ff43089857cd
2012-05-02 12:54:46.975 UTC
acb3452e-6be0-4669-9e84-22808ff471cc
2012-05-03 15:46:36.879 UTC
90744424-a1a0-4107-b358-5e931c677e4a
2012-05-01 08:35:44.460 UTC
2ee8114d-7999-4833-ba39-97ddb6ff067c
2012-05-03 15:43:09.120 UTC
d5aa2bb0-c984-456c-9ec2-df78463f1914
2012-05-01 08:39:00.787 UTC
Workflow36JobID00StatusOutputStandardOuputREST_Service_2JobID0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/SelectJob?IdJob={JobID}
application/xml
application/xml
String
false
false
false
false
true
JobID
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs>
/Jobs/Job/Status
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs>
/Jobs/Job/Output
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://testjst.ba.infn.it/giacintoAraneaeNuc.fas 1,2,5 2e-10</Arguments><Comment>interactive</Comment><CPUs>1</CPUs><Flag>46d409fa-c716-4e69-8e2d-0286a2ddd11c</Flag><Id>454291</Id><LastCheck>2012-04-30 11:53:07.0</LastCheck><Name>ProfileFrameFinder</Name><Output/><Provenance/><StadardOutput> </StadardOutput><Status>2104118383</Status></Job></Jobs>
/Jobs/Job/StadardOutput
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Service_2JobIDXPath_Service_2xml_textMerge_String_List_to_a_StringstringlistMerge_String_List_to_a_StringseperatorXPath_Service_2_2xml_textMerge_String_List_to_a_String_2stringlistMerge_String_List_to_a_String_2seperatorXPath_Service_2_2_2xml_textStatusOutputStandardOuput
cdf36b60-31c3-441b-85ad-e8b0d3ede120
2011-11-30 16:25:32.213 UTC
d55f213c-926c-42e9-8661-b736e95873aa
2011-11-30 16:18:57.829 UTC
2d403c97-a8ff-4771-af6a-87a0acb58104
2012-05-04 09:54:50.672 UTC
a86eb045-aff2-46b1-ad28-5aaa0ca632c8
2011-11-30 17:07:17.999 UTC
5aef3e63-9bb3-4905-9214-52026f781425
2011-11-30 16:10:33.343 UTC
c449dc7c-7655-484b-a369-a771da9a838b
2012-04-02 16:08:18.498 UTC
Workflow14Name00Argument00StatusOutput_PathXML_ReportREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments}
application/xml
application/xml
String
false
false
false
false
true
arguments
java.lang.String
name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job>
/Job/JobsID/JobId
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>Status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + ! Status.equals("done");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameREST_ServiceargumentsXPath_Servicexml_textWorkflow36JobIDStatusOutput_PathXML_Report
25d638c9-672c-498e-913b-4bceb4230f8e
2011-11-30 17:10:59.924 UTC
e4960fd7-230d-477c-b7d0-c78c52b1924a
2012-11-28 17:15:39.209 UTC
a3848c5b-b720-4bc7-8e8a-d0a4e305b43f
2012-04-02 16:09:05.883 UTC
b9cf606e-166f-471c-b51e-d2f517526ad1
2011-11-30 17:00:56.590 UTC
be8cd221-9345-4c91-9fb4-b413978b0a6a
2011-11-30 16:05:00.470 UTC
0ca845f5-dbee-4c11-8b69-2843a6c7e40e
2012-05-03 15:26:02.481 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
2011-11-30 15:53:41.975 UTC
7b7863ae-a026-4317-8084-9a00049fccf8
2012-04-05 11:23:09.57 UTC
a2b6b247-c946-4883-8d6d-469ea6573f93
2011-11-30 15:51:07.192 UTC
e43a348a-e348-4438-8177-6417a492404c
2012-10-02 09:13:25.977 UTC
eb0a0648-1196-4215-b698-acb8729bf045
2011-11-30 15:47:24.13 UTC
38b1f6f3-d29c-408a-9360-46930d61cff7
2012-05-04 09:55:44.596 UTC
e2682dca-1389-49ad-a886-491fa918d268
2011-11-30 15:54:01.684 UTC
bda5ff28-ff17-4ff2-9191-13acd55b73f3
2011-11-30 17:07:35.484 UTC
bcc60618-7449-4965-b39d-d0d6d90ec7db
2011-11-30 15:49:46.56 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
2bb836b5-2738-4f3f-864d-5a77e76bdd1f
2011-11-30 17:09:13.282 UTC
15c52e11-e32b-46b2-857c-89226396dc45
2011-11-30 15:41:58.998 UTC
3aba8bc3-36ee-473d-a504-288a1f9998df
2011-11-30 16:07:49.591 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
745b7346-e8be-4864-ba02-1ae1d255f50d
2012-04-05 09:28:59.571 UTC
36001f84-a643-4173-80ee-118a0ceaecbc
2011-11-30 17:10:08.264 UTC
5f07e956-6857-4261-ae1e-1ab5ba32ab08
2011-11-30 16:07:05.176 UTC
97c8a203-1938-4e3f-90f3-87694c3a795a
2011-11-30 15:59:45.57 UTC
0b2a7cd3-3853-434d-b462-4a2d7796ea7d
2011-11-30 15:48:49.960 UTC
bed4b280-a552-4ad9-8bfe-54a2fabae11f
2012-04-05 09:41:33.486 UTC
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
a65689de-3539-4833-9e3e-c32aa9237d39
2011-11-30 15:52:17.202 UTC
4cc9395d-b178-451b-aef7-a34678d0d490
2011-11-30 15:51:55.76 UTC
Workflow1URL00FullyDummyOutputInteractiondestination0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
destination
0
text/plain
java.lang.String
false
http://www.mygrid.org.uk/taverna/internal/biovel/open_url.html
LocallyPresentedHtml
true
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
DummyOutput
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInteractiondestinationFullyDummyOutput
55542b17-acee-4db7-91d0-f98393aa66f3
2012-05-04 22:48:22.640 UTC
8ba75a8c-c9e1-4939-a604-f832383af079
2012-05-04 20:12:33.214 UTC
c10b71f9-b7bf-4eb7-bf51-b08d68abeb15
2012-05-10 07:45:40.839 UTC
11f188b9-1ba3-478c-a8af-73369e0b7750
2012-05-04 20:21:24.403 UTC
e67a37fd-4c95-4b40-a88e-c4c1903f2f80
2012-05-04 20:12:04.919 UTC
Phylogenetic_inferenJobID00NexusFileName00URL_Output_file
The output of the consensus service is a path were to obtain a zipped folder that includes all output from phylogenetic inference and the one of the consensus
2013-02-01 16:55:11.210 UTC
GeoKS_Result
Restul of the GeoKS test of convergence.
2013-02-01 16:21:52.128 UTC
<result><success>True</success><burnin>16</burnin><pvalues>0.962205</pvalues></result>
2013-02-01 16:18:24.577 UTC
convergence
path to obtain the output file of program geoks
2013-02-01 16:51:20.3 UTC
newickTree
<res><tree>(ADD09384_1_555_ADD09384:1.18452,ABY27676_1_453_ABY27676:0.16674,(ACM89220_1_657_ACM89220:0.16271,(ADJ82639_1_645_ADJ82639:0.15654,(ADW58631_1_657_ADW58631:0.00298,ADW58691_1_657_ADW58691:0.00584)1.00:0.07383)0.98:0.04988,(ADW61587_1_657_ADW61587:0.10163,(ADH12119_1_645_ADH12119:0.14993,ADQ21240_1_648_ADQ21240:0.15645)0.90:0.06174)0.89:0.07555,(AEC60810_1_657_AEC60810:0.13396,((AEE92862_1_657_AEE92862:0.00180,AEE92882_1_657_AEE92882:0.00294)0.93:0.01820,(AEE92860_1_648_AEE92860:0.00172,AEE92867_1_642_AEE92867:0.00260,AEE92861_1_633_AEE92861:0.00326)0.85:0.01568)1.00:0.18625)0.99:0.14972)0.63:0.13345);</tree></res>
2013-02-01 16:53:50.585 UTC
small xml with tag res with one or more tag tree each one with a body that contain a tree in netwick format.
each tree represent the consensus for a given partition of group of partition in the same order that are cited in the nexus input file of mrbayes
2013-02-01 16:53:25.629 UTC
xmlTest
<res>
<L description="Ibrahim statistics">423.122037352</L>
<Ls description="Ibrahim statistics">428.606079329</Ls>
<P description="Bolback statistics">1.0</P>
<meanE description="Mean Expected Value of MaxLikelihood">-2627.87756007</meanE >
<Mobs description="Observed MaxLikelihood">-3045.44353779</Mobs>
<varSim description="Variance of Expected MaxLikelihood">4670.91274471</varSim>
<ExpDist description="Distribution of ExpectedValue">-2589.20637194,-2639.19315086,-2648.73145729,-2610.52687863,-2585.58189766,-2659.38736705,-2574.18508073,-2723.33127804,-2704.75327374,-2631.32558631,-2552.5101582,-2703.39380494,-2667.13202763,-2651.50061539,-2569.28198383,-2626.62095931,-2617.76281875,-2572.57059545,-2709.19885221,-2688.46426288,-2637.69736502,-2670.66419513,-2696.07449828,-2655.07124413,-2647.79827494,-2604.91472976,-2534.24408297,-2583.34924816,-2668.87938323,-2740.57305901,-2530.11916167,-2562.9442791,-2685.41059003,-2633.56902122,-2578.83564307,-2658.37912818,-2677.44851934,-2652.06899557,-2663.63424658,-2469.63098045,-2596.01725813,-2576.9875296,-2591.27350833,-2527.44870379,-2715.68701201,-2579.27957802,-2697.29097232,-2653.00610636,-2523.66960289,-2655.8841772,-2738.57859993,-2705.53182443,-2684.40099097,-2753.99486914,-2642.32534055,-2615.3927742,-2631.21113197,-2742.02571906,-2634.42641856,-2531.52928978,-2584.85740825,-2698.68226298,-2531.43531149,-2746.77385677,-2701.02474243,-2582.30350573,-2700.11149286,-2420.65243487,-2607.17713434,-2661.51426589,-2650.16168222,-2647.65155726,-2588.47948607,-2630.75469861,-2497.64331913,-2530.25525188,-2615.65091658,-2727.78832928,-2698.71995068,-2594.46551089,-2686.27551492,-2572.56237886,-2689.25088172,-2573.35445443,-2713.22086611,-2583.46460149,-2628.94579908,-2435.58149796,-2651.07259891,-2627.98995835,-2654.27986508,-2575.08681898,-2605.36422889,-2612.01841594,-2776.62534019,-2630.16209443,-2532.75232406,-2478.6691404,-2629.15296535,-2557.65795904,-2606.9330103,-2676.16136514,-2637.71752968,-2574.30204479,-2647.04416783,-2677.9611039,-2589.79676102,-2629.41620838,-2697.8045608</ExpDist>
</res>
2013-02-01 16:17:58.58 UTC
Result of the Posterior Predictive test. the XML gives the details of the bolback test and the different component of the ibrahim statistics
2013-02-01 16:17:02.64 UTC
Plot
Result of the Posterior Predictive test. Histogram of the distribution of the complexities (log of sum of sites entropy or maximal possible loglikelihood score) of the simulated data using the posterior distribution parameters compared with observed data complexity. The 1-alpha high posterior density of the distribution show the region where simulate data complexity match the observed one. Larger observed complexity indicates model too simplistic, while the contrary indicates overparametrization of the model.
2013-02-01 16:14:07.751 UTC
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Choose the minimal probability value that the observed MCMC integration has converged (e.g. 0.1, 0.95)
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<?xml version="1.0" encoding="UTF-8"?>
<res><tree>a</tree><tree>b</tree></res>
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMrBayesPPtestvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
MrBayesPPtest
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_Four_stringspathInputMrBayes0burninvalue0numberSample0nameRun0output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
nameRun
0
'text/plain'
java.lang.String
true
pathInputMrBayes
0
'text/plain'
java.lang.String
true
numberSample
0
text/plain
java.lang.String
true
burninvalue
0
text/plain
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-11-22 15:44:01.483 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokecondition_checkercondition0pass_flags11fail_flags11
This service checks if the condition is "true" and if so outputs a value in the pass_flags list and
leaves the fail_flags empty. If the condition is not true then the service outputs a value in the
fail_flags list and leaves the pass_flags empty.
2011-11-15 09:59:22.100 UTC
net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity
condition
0
text/plain
java.lang.String
true
pass_flags
1
1
fail_flags
1
1
workflow
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow20Sentinel0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
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0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow20_2Sentinel0net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMakeHistogramXML0Alpha0plot22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_PPTSizemessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
message
0
java.lang.String
true
title
0
java.lang.String
true
answer
0
0
ask
VelocityTemplate
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Sample Size from the Posterior Distribution to test fit of model on Data
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
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0.05
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1
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_Retrieve_MrBayesJobjobIDCall_Retrieve_GeoKS_JobArgumentCall_Retrieve_GeoKS_JobNameConcatenate_three_stringsPathConcatenate_three_stringsModeConcatenate_three_stringsAlphaShowWebPageURLSplit_string_into_string_list_by_regular_expression_erase_laststringSplit_string_into_string_list_by_regular_expression_erase_lastregexDownloadMRBayesOutputURLSplit_string_into_string_list_by_regular_expression_erase_last_2regexSplit_string_into_string_list_by_regular_expression_erase_last_2stringMerge_String_List_to_a_StringstringlistMerge_String_List_to_a_StringseperatorMerge_String_List_to_a_String_2stringlistMerge_String_List_to_a_String_2seperatorask_AlphaXGeoKSmessageCall_Retrieve_ConsensusTreeArgumentWorkflow31NewickStringParsing_GeoKSGeoKS_XMLConcatenate_two_stringsBurninConcatenate_two_strings_2string2Concatenate_two_strings_2string1XPath_Servicexml_textPosterioPredictiveTestNamePosterioPredictiveTestArgumentConcatenate_Four_stringspathInputMrBayesConcatenate_Four_stringsburninvalueConcatenate_Four_stringsnumberSampleConcatenate_Four_stringsnameRuncondition_checkerconditionWorkflow20SentinelWorkflow20_2SentinelMakeHistogramXMLMakeHistogramAlphaask_PPTSizemessageURL_Output_fileGeoKS_ResultconvergencenewickTreexmlTestPlot
f2eec3d8-e7d3-475f-8785-fdadab1e2b99
2013-01-17 14:55:21.80 UTC
6eaa8577-af0a-40ba-abd4-96882b560b33
2012-09-27 13:06:49.941 UTC
f2cf9ee0-2879-475b-a39d-8c991511ded9
2012-05-05 05:36:14.476 UTC
e397ca8c-9f58-4259-911b-f04e492e6449
2012-05-07 06:34:39.162 UTC
db82ef12-c7de-4ce1-b0b0-1a85d432884c
2013-01-31 12:42:53.95 UTC
62811f0c-70f7-4a4a-bc63-ff6c45c445ba
2012-05-06 19:42:35.26 UTC
4c876aa9-7a31-45e1-87bd-bd7d53d8ec43
2012-10-01 10:12:35.502 UTC
1a490476-5a3e-423c-b8ec-02b6e3c6cee7
2013-02-19 10:01:13.928 UTC
8991979f-867a-45d7-af9a-2b0e95e4b25c
2013-02-20 10:40:27.977 UTC
Phylogenetic inference with MrBayes and NoGUI, test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test)
2013-02-05 16:19:21.451 UTC
92d8638e-e7d8-4de7-895c-a15bbf047874
2012-10-01 11:27:41.460 UTC
30d176de-d29b-466d-b9a5-6d28a4a2bc3c
2012-10-01 09:16:33.864 UTC
c5d850c1-e111-42d2-ab76-bfd0af11f040
2012-06-08 08:32:43.388 UTC
aba185c1-c311-4ef9-a92d-b9a8ddd5304f
2012-05-10 07:45:12.499 UTC
0de23bd7-a836-43aa-9d09-db059b20b545
2012-12-17 20:52:48.670 UTC
2e88e37f-3a55-4402-9e24-a31bbefbace3
2012-05-06 20:01:48.485 UTC
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2013-02-18 17:11:09.734 UTC
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2012-05-10 07:30:02.691 UTC
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2012-11-30 12:47:45.295 UTC
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2013-02-01 15:01:52.115 UTC
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2012-09-21 10:41:50.255 UTC
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2012-12-17 20:53:14.82 UTC
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2012-05-07 05:01:08.484 UTC
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2012-05-07 11:24:21.300 UTC
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2012-05-07 09:21:22.516 UTC
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2012-05-24 16:26:56.417 UTC
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2013-02-01 16:55:16.742 UTC
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2012-09-21 10:44:29.55 UTC
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2013-02-19 15:43:09.787 UTC
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2012-05-07 11:33:56.157 UTC
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2013-02-05 15:51:18.684 UTC
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2012-09-27 12:49:24.32 UTC
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2013-01-31 10:58:38.682 UTC
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2012-09-21 10:50:08.42 UTC
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2012-09-27 13:23:19.565 UTC
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2012-05-05 05:59:23.297 UTC
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2012-09-27 13:56:16.135 UTC
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2012-05-04 20:55:37.723 UTC
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2012-05-04 20:19:24.424 UTC
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2012-09-27 14:47:53.418 UTC
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2012-05-05 05:39:14.842 UTC
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2013-02-18 17:03:06.336 UTC
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2012-09-27 13:48:47.807 UTC
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2012-10-01 14:43:17.747 UTC
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2013-02-18 15:19:38.341 UTC
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2013-01-18 14:36:21.222 UTC
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2013-01-31 11:46:12.660 UTC
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2013-02-20 12:57:07.450 UTC
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2012-09-27 14:49:05.721 UTC
92687a2d-c280-4e82-bfd8-0a36736b49ba
2012-05-04 20:15:14.403 UTC
Phylogenetic inference with MrBayes and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test)
2013-02-01 15:01:51.770 UTC
158c7c7c-8ae6-425f-97a8-faec72212282
2013-02-19 13:58:51.337 UTC
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2012-12-17 20:52:03.795 UTC
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2012-11-28 17:28:27.85 UTC
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2012-09-21 11:00:21.91 UTC
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2012-05-04 19:55:35.621 UTC
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2013-02-05 16:19:23.941 UTC
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2013-02-18 17:16:35.103 UTC
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2013-02-19 10:18:45.174 UTC
a6fda157-6f40-456f-bd19-3a80975cb13c
2013-02-19 17:12:21.318 UTC
saverio vicario
giacinto donvito
bachir balech
2013-02-01 15:00:22.266 UTC
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2012-06-04 11:40:43.39 UTC
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2012-10-01 14:41:20.67 UTC
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2012-05-10 07:45:43.653 UTC
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2012-09-21 14:38:51.392 UTC
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2012-05-06 19:49:52.928 UTC
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2013-02-19 15:32:23.552 UTC
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2013-03-25 14:41:31.500 UTC
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2012-09-21 10:25:37.359 UTC
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2012-10-01 11:08:06.43 UTC
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2013-01-30 22:29:37.592 UTC
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2013-02-18 15:22:04.38 UTC
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2013-02-18 22:01:31.888 UTC
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2013-02-01 17:19:45.120 UTC
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2013-01-18 14:41:22.116 UTC
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2013-01-31 13:28:47.932 UTC
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2012-10-01 14:09:52.466 UTC
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2012-05-04 20:22:08.233 UTC
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2013-02-18 16:23:22.79 UTC
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2012-10-01 10:20:14.331 UTC
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2012-11-28 15:47:13.111 UTC
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2012-10-01 14:38:06.182 UTC
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2013-02-18 21:54:07.300 UTC
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2012-05-05 05:26:04.315 UTC
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2012-09-27 13:27:39.302 UTC
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2012-09-27 13:43:00.883 UTC
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2012-05-05 05:31:48.797 UTC
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2012-08-31 14:07:32.782 UTC
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2012-05-05 05:33:43.971 UTC
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2012-09-27 12:52:22.945 UTC
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2012-09-21 15:17:03.341 UTC
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2012-10-01 11:34:27.628 UTC
13e17a4a-4643-4e7b-9927-9bd4c6c59aac
2012-05-04 17:41:18.866 UTC
a4033e8d-b19c-4187-84b6-15ffbaf2d805
2012-10-01 13:50:02.205 UTC
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2012-05-04 20:36:30.12 UTC
71d60b33-01b7-45f4-b35f-431a2275efb1
2013-02-18 15:53:36.279 UTC
725f4a9d-7d95-4352-ba92-0e9615df53d9
2012-11-22 15:52:00.494 UTC
853af834-c55a-4f72-be8f-1b03ff20bd8f
2012-06-08 09:36:57.264 UTC
2b42be78-e780-4257-9c67-d2a51b8c4827
2012-05-05 05:26:39.935 UTC
ff51bb66-2602-481a-82b4-7676456316df
2012-05-04 19:50:27.88 UTC
cb6364bb-1322-491f-94ae-29d7ccad4a47
2013-02-01 16:59:58.676 UTC
cb4c52fb-4491-490e-8935-2872e2a25c09
2013-01-17 15:05:59.451 UTC
654e704d-1e41-4b72-9933-c2ae0cf51922
2012-06-08 08:39:44.818 UTC
148a5fd3-5119-422a-9787-7a0328c6b0f3
2012-09-21 15:04:35.216 UTC
1be2f39f-ee9d-428d-87f4-c553ac861b8b
2012-09-27 13:12:32.717 UTC
0d861536-4a1d-48e9-ad10-c0cac7399b8b
2012-09-27 12:50:04.836 UTC
3e0a9baa-6c9e-4835-ba1a-af88102c1c71
2013-02-19 15:39:23.154 UTC
a578675c-5281-470b-a9c6-5cda2dc96e99
2013-01-30 22:51:08.196 UTC
ae0d823a-0415-40ff-81c2-97b6fcaf6dc0
2012-09-27 14:27:42.360 UTC
2ed748c1-f20f-41b7-a426-1e1a3b52059c
2012-05-06 20:16:44.23 UTC
ffe5fb3f-cad4-4f60-bd77-776a19a37a27
2012-09-27 13:24:34.726 UTC
4c571cdb-e311-423e-bf31-27496bb626a1
2012-09-21 14:59:52.390 UTC
Phylogenetic_inferenMSA_fasta00
>ABY27676/1-453 ABY27676
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------TTAATATTAGGA
GCTCCAGATATAGCTTTTCCTCGAATAAATAATCTTAGTTTTTGGTTGCTTCCTCCTTCTTTGATTTTATTA
ATAATTTCTTCAATAGTGGAGATAGGGGTTGGGGCGGGGTGAACTATTTATCCTCCTTTATCGGGTAGTCTA
GGTCATTCAGGGGTTTCAGTAGATTTAGCTATTTTTAGCTTACATTTGGCGGGAGCTTCTTCAATTATAGGA
GCAATTAATTTTATTTCCACTATTTTAAATATACGTTCAGTTGGGATATCTATAGATAAGGTACCTTTATTT
GTGTGATCTGTATTAGTTACTGCTGTTTTATTATTATTATCTTTACCAGTTTTAGCCTGGGGTATTACGATA
TTATTAACAGATCGAAATTTTAACACTTCTTTTTTTGACCCTGCGGGTGGAGGTGATCCAATTTTATTTCAA
CATCTTTTT
>ADW61587/1-657 ADW61587
ACGTTATATTTAATATTTGGGGCTTGAGCTGCTATAGTAGGAACAGCCATAAGAGTATTAATTCGAATTGAA
TTAGGTCAACCTGGGAGGTTTATTGGGGATGATCAATTATATAATGTAATCGTTACTGCTCATGCATTTGTT
ATAATTTTTTTTATAGTAATACCTATTTTGATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGC
GCTCCTGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGCTACTCCCTCCTTCATTATTTTTATTA
ATTATTTCTTCTATAGTAGAAATGGGAGTGGGGGCAGGATGGACGGTTTATCCTCCTTTAGCTAGTTTAGAG
GGCCATGCTGGCAGGTCAGTGGATTTTGCTATTTTTTCTTTACATTTAGCGGGGGCCTCCTCTATTATGGGG
GCTATTAATTTTATTTCTACTATTATTAATATACGATCGCATGGAATAACTATAGAAAAAGTACCTTTATTT
GTATGATCAGTATTGATTACTGCTGTATTATTATTATTATCACTTCCAGTATTGGCGGGGGCTATCACAATA
TTATTAACTGATCGAAATTTTAATACTTCGTTTTTTGACCCTTCAGGAGGGGGGGATCCAATCCTTTTCCAA
CATTTATTT
>AEE92862/1-657 AEE92862
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATGGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>AEC60810/1-657 AEC60810
ACTTTGTATTTATTGTTTGGTATTTGATCTGCTATAATGGGAACGGCAATAAGAGTGATTATTCGAATTGAA
TTAGGTCAAGTTGGAAGATTGTTGGGTGATGATCATTTATATAATGTAATTGTAACAGCACATGCTTTGGTT
ATGATTTTTTTTATAGTTATACCGATTTTGATTGGTGGATTTGGAAATTGAATAGTTCCTTTGATGTTAGGT
GCTCCAGATATAGCATTCCCACGTATAAATAATTTGAGATTTTGATTGCTTCCTCCATCATTATTTTTGTTA
TTATTATCTTCTTTAACAGATGTAGGGGTTGGAGCCGGGTGAACTATTTATCCTCCTTTATCCTCTGGGGTT
GGACATAGAGGGGGGGGGATGGATTTTGCTATTTTTTCTTTACATTTAGCAGGAGCTTCATCTATTATAGGG
GCGATTAATTTTATTACAACAATTATTAATATGCGAAGATTTGGAATAACAATAGAACGTGTACCTTTATTT
GTGTGATCAGTTCTTATTACTACTATTTTATTATTGCTTTCTTTACCTGTATTGGCTGGTGCTATTACTATA
TTGTTGACTGATCGAAATTTCAATACTTCTTTTTTTGATCCTGCTGGAGGTGGTGATCCTATTTTGTTTCAA
CATTTATTT
>AEE92861/1-633 AEE92861
------------------------TGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAATATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>AEE92860/1-648 AEE92860
---------TTTGTTTTTGGAGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADD09384/1-555 ADD09384
------------------------------------------------------------------------
------------------------------TATCAGCTATACAATGTATTAATTACCGCTCATGCTATAATT
ATGGTATTTTTCATGATTATGCCAGCTTTATTTGGTGGATTTGGTAATTACTTTGTACCAATTTTAATAGGT
GCCCCGGATATGGCTTTTCCTAGGCTAAATAATATAAGTTTTTGGCTACTTGTCCCTGCTTTTATATTATTA
ATGCTGTCAGGTTTGGTTGATGGAGGAGCTGGTACTGGCTGGACACTGTATCCTCCTCTAAGTAGTATAGTA
GGGCATCCTGGCGCTGCTGTCGATATGGCTATTTTAAGCTTACATCTTACAGGGCTTTCCTCCATTCTTGGT
TCAATTAATATGATTGTCACTATCTTTAATATGAGAACTGATGGTATGGGGTTATTTGAAATGCCCTTATTT
GTTTGGTCAATTTTGGTTACTGCCTTCTTGCTGATACTAGCAATTCCTGTGTTAGGGGGTGCAATAACCATG
TTACTGACTGATCGAAATTTTGGTACTACTTTTTTCAAGCCTGATGGTGGCGGAGATCCAGTGTTATTTCAG
CATTTATTT
>ADJ82639/1-645 ADJ82639
ACTTTATATTTAATGTTTGGGGTTTGGTCAGCTATAATAGGAACTGCTATAAGAGTATTAATTCGAATGGAA
TTAGGGAATCCTGGTAGATTGTTAGGTGATGATCATTTGTATAATGTTATAGTTACTGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTAATGCCTATTCTTATTGGAGGTTTTGGAAATTGATTAGTTCCTTTAATATTAGGA
GCTCCAGATATATCATTTCCTCGAATAAATAATCTTTCTTTTTGATTATTACCTCCTTCTTTATTTTTGTTA
TCTATATCTTCTATAGTAGAAATAGGAGTTGGGGCTGGGTGAACTGTTTATCCTCCTTTAGCGTCTACAGTT
GGGCACATAGGAAATTCAATAGATTTTGCTATTTTTTCTCTTCATTTAGCTGGAGCTTCTTCTATTATAGGA
GCTGTAAATTTTATTTCTACCATTATTAATATACGAATATTAGGAATATCTATAGAGAAGGTTCCTCTTTTT
GTTTGATCAGTTTTAATTACAGCAGTATTATTATTACTTTCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACAGATCGAAATTTTAATACTTCTTTTTTTGATCCTGCTGGGGGAGGAGATCCTAATTTATTT---
---------
>ADQ21240/1-648 ADQ21240
AGATTATATTTTGTTTTTGGGGCTTGAGCTGCTATAGTAGGAACAGCAATAAGAGTATTAATTCGTGTTGAG
TTGGGACAAACTGGTAGTTTGTTAGGGGATGATCAGTTGTATAATGTTATTGTTACGGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTTATGCCTATTTTAATTGGGGGTTTTGGAAATTGGCTGATTCCACTAATACTAGGA
GCTCCGGATATAGCTTTCCCTCGTATAAATAATTTGAGATTTTGGCTTTTACCCCCTTCTTTATTATTACTG
TTTATTTCAAGCATAGATGAGATAGGAGTGGGGGCGGGATGAACGGTTTACCCCCCTCTTGCCTCTTTAGAG
GGACATTCTGGTAGTTCAGTAGATTTTGCTATTTTTTCTTTACACTTAGCTGGAGCGTCTTCTATTATAGGG
GCTATTAATTTTATTTCCACAATTTTGAATATACGGGGTTATGGAATATCTATAGAAAAAGTACCTTTATTT
GTTTGGTCCGTGTTAATTACAGCTGTATTATTATTGTTATCTCTTCCTGTGTTAGCTGGGGCTATCACAATA
TTACTGACGGATCGTAATTTTAATACTTCATTTTTTGATCCTTGTGGGGGGGGGGATCCTGTTTTGTTTCAA
---------
>AEE92882/1-657 AEE92882
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATTGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>ADW58691/1-657 ADW58691
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTATTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGTTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATGGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ADW58631/1-657 ADW58631
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTACTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGCTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATAGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ACM89220/1-657 ACM89220
ACTTTATATTTTTTATTTGGTACTTGATCAGCAATAATTGGTACAGCAATAAGTGTTTTAATTCGTGTTGAA
CTAGGATTTTCTGGAAGATTTTTAGGTGATGATCATTTATATAATGTAATTGTTACTGCTCATGCTTTTATT
ATAATTTTTTTTATAGTTATACCTATTTTAATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAAGA
GCTCCAGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGTTACTACCTCCTTCGTTATTATTGTTA
TTTATTTCTTCTATGGTTGAAATCGGAGTTGGAGCAGGGTGGACTATTTATCCTCCTTTATCTTCTTCTGTG
GGTCATTCTGGTGCATCTATGGATTTTGCAATTTTTTCTCTTCATTTAGCTGGTGCTTCTTCTATTATAGGT
GCTATTAATTTTATTTCAACAATTATTAATATACGACCTTATGGTATAAGAATAGAAAAGATTCCTTTATTT
GTATGATCTGTATTAATTACAGCTGTCTTATTATTATTATCATTACCAGTATTAGCTGGGGCTATTACTATA
CTTTTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCAGCTGGGGGTGGGGATCCAATTTTATTTCAG
CATTTATTT
>AEE92867/1-642 AEE92867
---------------TTTGGGGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADH12119/1-645 ADH12119
ACTTTATACTTGGTTTTTGGTGCTTGAGCGGCTATGGTTGGAACTGCAATAAGTGTTTTAATTCGAATTGAG
TTGGGGCAATCTGGTAGATTTATGGGAGATGATCAGTTGTATAATGTTATTGTAACTGCTCATGCTTTTGTT
ATAATTTTTTTTATGGTTATGCCTATTTTGATTGGGGGCTTTGGTAATTGACTGGTTCCTTTGATGTTGGGG
GCTCCTGATATGGCTTTTCCTCGCATGAATAATTTAAGGTTTTGATTATTGCCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATGGTGGAAATAGGGGTTGGGGCTGGTTGAACGATCTACCCTCCTTTAGCGTCTCTAGAA
GGACATTCAGGAAGTTCGGTTGATTTTGCCATTTTTTCTTTGCATTTGGCTGGGGCCTCTTCTATTATAGGG
GCTATTAATTTTATTTCTACAATTTTGAATATACGGTCTTATGGGATGTCTATGGAAAAAGTTCCTTTGTTT
GTTTGGTCGGTTTTAATTACTGCTGTTTTGCTCCTATTATCACTTCCGGTTTTAGCTGGGGCTATCACTATG
TTATTAACTGATCGAAATTTTAATACATCGTTTTTTGATCCTTCGGGGGGAGGGGATCCTATTTTTTTT---
---------
2013-02-18 15:21:07.688 UTC
Multiple Sequence Alignment in Fasta format
2013-02-18 15:21:26.152 UTC
PossiblePartition00
Gene1_pos1 = 1-657\3;
Gene1_pos2 = 2-657\3;
Gene1_pos3 = 3-657\3;
2013-02-18 15:21:41.66 UTC
Partitioning of the MSA using nexus/raxml syntax
2013-02-18 15:21:59.255 UTC
JobIDNexusFileNameUploadFile_Nexus4MrBayesFile_name0InputBody0REST_Service_redirection00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAskMrBayesServicevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
MrBayes_16CPUs
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_MrBayesJobName0Argument0JobID11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAsk_FileNamevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Choose a File Name
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_FileNamemessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
message
0
java.lang.String
true
title
0
java.lang.String
true
answer
0
0
ask
VelocityTemplate
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSelecting_EvolutionaPossiblePartition0MSA_fasta0MrBayesInput55net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUploadFile_Nexus4MrBayesFile_nameUploadFile_Nexus4MrBayesInputBodyCall_MrBayesJobNameCall_MrBayesJobArgumentask_FileNamemessageSelecting_EvolutionaPossiblePartitionSelecting_EvolutionaMSA_fastaJobIDNexusFileName
ae0d823a-0415-40ff-81c2-97b6fcaf6dc0
2012-09-27 14:27:42.360 UTC
d1e0cf97-9cb0-49e3-a551-a07517f38eae
2012-09-21 15:17:03.341 UTC
fc073daa-c6c4-4310-9b95-53362d175916
2013-02-18 15:22:04.38 UTC
614842a1-6ddb-4c35-9d9f-969e5da7619f
2012-09-27 13:48:47.807 UTC
1be2f39f-ee9d-428d-87f4-c553ac861b8b
2012-09-27 13:12:32.717 UTC
147bdfaa-2d8e-4634-af3d-5287c5e1bc93
2013-02-18 21:54:07.300 UTC
50c020ff-f443-422a-abf5-e25d8b6b7ba5
2012-09-21 10:25:37.359 UTC
2e88e37f-3a55-4402-9e24-a31bbefbace3
2012-05-06 20:01:48.485 UTC
86a8ff0b-b6b2-4195-aa27-78434bd71ce6
2013-01-30 22:29:37.592 UTC
6eaa8577-af0a-40ba-abd4-96882b560b33
2012-09-27 13:06:49.941 UTC
0de23bd7-a836-43aa-9d09-db059b20b545
2012-12-17 20:52:48.670 UTC
3149d816-5e8f-4c55-9019-1a16e770304a
2013-02-18 22:01:31.888 UTC
db82ef12-c7de-4ce1-b0b0-1a85d432884c
2013-01-31 12:42:53.95 UTC
f6dfc090-2f2c-477b-807e-77451e50a763
2012-10-01 14:43:17.747 UTC
cb4c52fb-4491-490e-8935-2872e2a25c09
2013-01-17 15:05:59.451 UTC
d5085302-3ecf-437c-9919-d736050878ac
2012-10-01 14:38:06.182 UTC
62811f0c-70f7-4a4a-bc63-ff6c45c445ba
2012-05-06 19:42:35.26 UTC
cea94a2d-87c7-4e88-aeb8-4917cf0d5d79
2012-05-04 20:22:08.233 UTC
43a9b22d-0fca-4ca5-817b-821670a43d5d
2012-10-01 10:20:14.331 UTC
725f4a9d-7d95-4352-ba92-0e9615df53d9
2012-11-22 15:52:00.494 UTC
e0a2fd90-6178-4d3c-abd0-f1badc8860bc
2013-02-18 17:11:09.734 UTC
1d74772a-ac74-4da8-bf09-2513241893b6
2013-02-01 15:01:52.115 UTC
ffe5fb3f-cad4-4f60-bd77-776a19a37a27
2012-09-27 13:24:34.726 UTC
28dda23e-c7dc-4d44-ac20-86cff432f946
2012-05-07 11:33:56.157 UTC
37ec3cd4-9442-4c9a-aaa7-b42fab661cbf
2012-09-27 13:23:19.565 UTC
4c571cdb-e311-423e-bf31-27496bb626a1
2012-09-21 14:59:52.390 UTC
30d176de-d29b-466d-b9a5-6d28a4a2bc3c
2012-10-01 09:16:33.864 UTC
ff51bb66-2602-481a-82b4-7676456316df
2012-05-04 19:50:27.88 UTC
2b42be78-e780-4257-9c67-d2a51b8c4827
2012-05-05 05:26:39.935 UTC
3e5be10b-fbfc-40df-9fc6-5915993a6571
2013-02-19 07:44:36.728 UTC
cb4c52fb-4491-490e-8935-2872e2a25c09
2012-12-17 20:53:14.82 UTC
84ce3b14-97fe-4304-bceb-9b4cd957c932
2012-05-07 09:21:22.516 UTC
6b5b4660-45a4-4484-a012-1f591d68225e
2012-05-05 05:39:14.842 UTC
f2eec3d8-e7d3-475f-8785-fdadab1e2b99
2013-01-17 14:55:21.80 UTC
0aced691-cc6a-4fca-b002-808e4c0c217c
2013-02-19 17:06:18.901 UTC
6e1fadda-86ac-4819-9055-f2f9b4529cd8
2012-05-05 05:26:04.315 UTC
01d42280-c0e3-49ef-879e-4cb375f539dc
2012-09-21 11:00:21.91 UTC
4e9ed3ca-87ce-4c1b-9f45-0d4235a79d5a
2012-09-21 14:38:51.392 UTC
236ea769-4950-4cbc-a49c-50fbaff3289a
2013-02-18 17:16:35.103 UTC
595d22d9-a6b3-4e5a-9b46-50367a689d7e
2012-05-24 16:26:56.417 UTC
224735cc-6188-45b8-aee3-5ca3e155d91e
2012-09-27 13:43:00.883 UTC
98a761ed-d95c-4ceb-bbe0-33d869cb0cce
2012-10-01 14:41:20.67 UTC
7b6d5741-adce-4f93-96d4-891441f374c3
2012-05-04 19:55:35.621 UTC
a27cfd7f-7b45-43b4-8ccb-130cf0d9733a
2012-09-27 12:49:24.32 UTC
31c4582c-7fbc-436f-808e-219c29dd543f
2013-02-18 16:23:22.79 UTC
47c9c213-e8fa-436c-a287-a83fc5208c6f
2013-01-18 14:36:21.222 UTC
0b674834-7e1a-4cbb-b036-b060fa321d4c
2012-08-31 14:07:32.782 UTC
145158db-9889-47be-ad17-e0907c558310
2012-05-10 07:30:02.691 UTC
3a7e3210-62e4-4659-8cbc-cfe56e79b733
2012-11-30 12:47:45.295 UTC
a4033e8d-b19c-4187-84b6-15ffbaf2d805
2012-10-01 13:50:02.205 UTC
92687a2d-c280-4e82-bfd8-0a36736b49ba
2012-05-04 20:15:14.403 UTC
3986bca4-3f44-4855-927c-c5792ede5e50
2012-05-05 05:33:43.971 UTC
0d861536-4a1d-48e9-ad10-c0cac7399b8b
2012-09-27 12:50:04.836 UTC
22f0a2d4-62a1-4d69-82a9-89004438c407
2012-05-04 20:19:24.424 UTC
c54ccc24-c297-47a6-91b2-759592b9553e
2012-09-21 10:50:08.42 UTC
314feaef-2962-4ca1-b9d7-d3a6910ea7ec
2012-12-17 20:52:03.795 UTC
f9c891c3-c38d-4d19-bde5-17ede9b84cd4
2013-01-31 11:46:12.660 UTC
2a525328-2870-4779-9c2a-a220733ad02f
2012-05-07 11:24:21.300 UTC
48a6027e-a36c-4e40-a39e-9e06ae14ba89
2013-02-18 15:19:38.341 UTC
148a5fd3-5119-422a-9787-7a0328c6b0f3
2012-09-21 15:04:35.216 UTC
a578675c-5281-470b-a9c6-5cda2dc96e99
2013-01-30 22:51:08.196 UTC
1221473d-5d8f-4bd1-ae73-73c16bbf8665
2012-10-01 11:34:27.628 UTC
91c502ab-7dbd-4946-9a79-275c218698ea
2012-09-27 12:52:22.945 UTC
72355fee-027c-40cf-83dc-4688c049f480
2012-05-10 07:45:43.653 UTC
bce05b28-e93a-478a-8e11-5b7421c236da
2012-09-27 13:56:16.135 UTC
71d60b33-01b7-45f4-b35f-431a2275efb1
2013-02-18 15:53:36.279 UTC
c95dc9e3-b14f-4055-b5ef-2a351d82e5e0
2013-02-19 07:41:05.564 UTC
2ed748c1-f20f-41b7-a426-1e1a3b52059c
2012-05-06 20:16:44.23 UTC
cba860ff-9ebd-40de-8547-6c3145656910
2012-10-01 14:09:52.466 UTC
4c876aa9-7a31-45e1-87bd-bd7d53d8ec43
2012-10-01 10:12:35.502 UTC
48e8950c-3739-4f2f-b32a-1e49cf0e9649
2013-02-18 17:03:06.336 UTC
1467395a-4390-4d0c-94f8-eec457c1c510
2012-11-28 17:28:27.85 UTC
Phylogenetic inference with MrBayes and NoGUI, test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test)
2013-02-05 16:19:21.451 UTC
f2cf9ee0-2879-475b-a39d-8c991511ded9
2012-05-05 05:36:14.476 UTC
3534f209-570c-452a-8193-b5ffc9cabc72
2012-09-21 10:44:29.55 UTC
5f9c3a31-a651-4cc2-a544-78f5783f9908
2012-05-06 19:49:52.928 UTC
6b0bfd33-6495-4668-bf08-4e03f64658a3
2012-11-28 15:47:13.111 UTC
6e0a2723-70bf-4a15-b6c5-7600193dca5a
2012-09-21 10:41:50.255 UTC
0acad263-fe61-45b7-abd6-66b493be4166
2012-06-04 11:40:43.39 UTC
92d8638e-e7d8-4de7-895c-a15bbf047874
2012-10-01 11:27:41.460 UTC
86a91296-5af0-4692-b7ba-d7d0365c7e97
2013-01-31 13:28:47.932 UTC
2cd3a593-21b6-4910-b425-9ecdb88279ec
2012-05-04 20:55:37.723 UTC
654e704d-1e41-4b72-9933-c2ae0cf51922
2012-06-08 08:39:44.818 UTC
12c1f28a-bea1-427d-b311-6718aa813bc8
2012-05-07 05:01:08.484 UTC
595fa70e-f728-416d-b783-1b367a04fde7
2013-01-18 14:41:22.116 UTC
40699599-a001-42c0-8759-88aa266a0271
2012-09-27 14:47:53.418 UTC
47880dd0-388d-40e0-b60f-97149a7133de
2013-02-01 17:19:45.120 UTC
Phylogenetic inference with MrBayes and test of MCMC convergence (GEOKS) and fit of the model on the data (Posterior Predictive test)
2013-02-01 15:01:51.770 UTC
7e529d1f-daa7-48b0-a1fd-465d9c2d3792
2012-05-05 05:59:23.297 UTC
aba185c1-c311-4ef9-a92d-b9a8ddd5304f
2012-05-10 07:45:12.499 UTC
501cffd4-34cb-4075-b2b1-39b06ac74d3d
2013-02-05 15:51:18.684 UTC
1546a518-e55d-430a-a352-4ed36668950e
2013-02-01 16:55:16.742 UTC
c5d850c1-e111-42d2-ab76-bfd0af11f040
2012-06-08 08:32:43.388 UTC
13e17a4a-4643-4e7b-9927-9bd4c6c59aac
2012-05-04 17:41:18.866 UTC
cb6364bb-1322-491f-94ae-29d7ccad4a47
2013-02-01 16:59:58.676 UTC
832a8933-7d2e-4cf4-8757-1cc8c79170c9
2012-05-04 20:36:30.12 UTC
1d45895c-3cd1-42bf-8006-2e72588110a0
2013-01-31 10:58:38.682 UTC
61eef98a-91c3-4731-be55-c2f92eea8df3
2013-02-19 10:43:13.326 UTC
853af834-c55a-4f72-be8f-1b03ff20bd8f
2012-06-08 09:36:57.264 UTC
2d7c8239-d18b-4173-89e6-712d06c61f51
2013-02-05 16:19:23.941 UTC
c2a6371c-aa82-4720-8901-ca21e64700a7
2012-10-01 11:08:06.43 UTC
saverio vicario
giacinto donvito
bachir balech
2013-02-01 15:00:22.266 UTC
e397ca8c-9f58-4259-911b-f04e492e6449
2012-05-07 06:34:39.162 UTC
22e1cb1c-e82d-422a-a9f6-93cd3965662f
2012-09-27 13:27:39.302 UTC
02bff899-ebc9-4edd-bc6b-d8074a66f141
2012-09-27 14:49:05.721 UTC
be99edbc-d1f0-4577-9265-0adeb47aa560
2012-05-05 05:31:48.797 UTC
Workflow23GeoKS_XML00
<result><success>True</success><burnin>10</burnin><pvalues>0.1,0.4</pvalues></result>
2012-10-01 09:07:29.124 UTC
output of the GeoKS_XML service.
2012-10-01 09:05:34.319 UTC
Success
"True"
2012-10-01 08:35:31.640 UTC
the result is "True" if convergence test is successfull and nothing if not
2012-10-01 08:35:23.824 UTC
Failure
the result is "True" if convergence test failed and nothing if it succed
2012-10-01 08:35:52.967 UTC
"True"
2012-10-01 08:35:57.135 UTC
Pvalues
[0.1]
2012-10-01 08:32:16.235 UTC
List of probabilities (number between 0 and 1) that each single tree included in the evolutionary model is inferred in the same way in the different runs of the MCMCMC phylogenetic inference. Generally evolutionary model include only one tree parameter, in this case the list is composed of only one element. In other case the order of the pvalues match the order the label tree in the MrBayes output
2012-10-01 08:33:07.346 UTC
Burnin
Is an integer that indicates how many of the initial samples from the MCMCMC calculation need to be discarded to approximate correctly the posterior distribution using the numerical sampling of the phylogenetic inference.
2012-10-01 08:37:34.736 UTC
100
2012-10-01 08:37:07.968 UTC
XPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result>
result/success
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result>
result/failure
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_3xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result>
result/pvalues
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionregex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string
0
'text/plain'
java.lang.String
true
regex
0
'text/plain'
java.lang.String
true
split
1
l('text/plain')
1
workflow
org.embl.ebi.escience.scuflworkers.java.SplitByRegex
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
,
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_4xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<result><success>True</success><burnin>10</burnin><pvalues>0.1,0.3</pvalues></result>
result/burnin
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_textXPath_Service_2xml_textXPath_Service_3xml_textSplit_string_into_string_list_by_regular_expressionregexSplit_string_into_string_list_by_regular_expressionstringXPath_Service_4xml_textSuccessFailurePvaluesBurnin
1ecb5fdb-8b84-4d1c-80e2-a0e83ba35b5f
2012-10-01 09:07:31.179 UTC
e0893a0a-af4a-43c1-920c-0ccbd2c611c1
2012-10-01 09:05:35.455 UTC
56c444d6-8047-44b4-b051-b35e888ec946
2012-10-01 08:33:28.157 UTC
55328719-02ba-4412-ace3-9f89eb885312
2012-10-01 08:37:35.251 UTC
Workflow58XML00Alpha00plotXPath_GetMobsxml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<res>
<L description="Ibrahim statistics">560.17351799</L>
<Ls description="Ibrahim statistics">562.48875169</Ls>
<P description="Bolback statistics">1.0</P>
<meanE description="Mean Expected Value of MaxLikelihood">-2487.59486231</meanE>
<Mobs description="Observed MaxLikelihood">-3045.44353779</Mobs>
<varSim description="Variance of Expected MaxLikelihood">2599.22552032</varSim>
<ExpDist description="Distribution of 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<?xml version="1.0" encoding="UTF-8"?>
<res>
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2013-01-30 17:54:24.348 UTC
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2013-01-18 13:10:35.355 UTC
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2013-01-18 14:22:09.275 UTC
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2013-01-18 14:18:34.579 UTC
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2013-01-18 14:28:33.303 UTC
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2013-01-18 14:31:43.924 UTC
761b4e64-f687-4e50-84db-e4b0646c511c
2013-01-18 14:29:54.690 UTC
c54159e0-c6a6-4eff-94ab-1cc4227d9e97
2013-01-18 13:47:27.908 UTC
1a6066d0-2af8-471c-87ae-38794792a587
2013-01-18 14:15:19.960 UTC
227eb774-23e2-42ca-83e4-5aef35d1bff6
2013-01-18 14:05:48.632 UTC
89f6adb1-912e-495c-ad9b-69ba693dbac0
2013-03-25 14:41:27.556 UTC
4cdd9e34-b3a5-49c7-9f4b-11dcd60d70fb
2013-01-18 14:13:33.917 UTC
b627d64c-d532-4e95-9c6a-7a8cd011bd5b
2013-01-18 13:02:39.729 UTC
3b6799f4-700c-444f-b53c-30dfd8717e5c
2013-01-31 12:21:21.111 UTC
93f8056c-42f1-4a59-946f-a2f8d3914baf
2013-01-31 13:28:27.618 UTC
bbaa94d2-2191-46c8-9baf-ed2b422ba9df
2013-01-18 11:45:05.828 UTC
86296fa5-ceb5-4884-a657-bb4fbf6f7c39
2013-01-31 12:20:38.421 UTC
3efe3c8e-5902-4e6f-b432-c3f9cbe9faf5
2013-01-30 22:50:49.812 UTC
82058ebc-ca68-43ab-851c-977c1e028d14
2013-01-18 13:11:08.87 UTC
898c126e-107b-468d-a69e-53f57a9c0d06
2013-01-18 14:19:50.940 UTC
8676cbb9-0719-4914-8f39-28270215165d
2013-01-18 14:17:35.129 UTC
053d63f4-a475-4f83-8059-381d0c48223c
2013-01-18 13:45:52.704 UTC
c3b130f6-35a6-40d1-a359-ae49b1a512dd
2013-01-18 11:47:38.828 UTC
1ba0dcd1-73fc-4891-b705-eaffd4de05f9
2013-01-18 14:32:21.787 UTC
274d23ca-206c-4823-bd4c-36e79194a36f
2013-02-01 17:02:29.461 UTC
a04d0f7d-6b72-4b7c-a724-0e40b0607840
2013-01-18 14:32:53.824 UTC
cc700065-877b-4f6f-bc60-2afefb4e4c72
2013-01-18 13:48:33.571 UTC
d6f3e11c-081d-4ecc-b65f-1f105cda6ec2
2013-01-18 13:12:23.690 UTC
03fcf575-2673-414d-81c7-2cafc1d681ba
2013-01-18 14:21:04.943 UTC
1e79fbaf-f64e-4888-9898-50350c3632f2
2013-01-18 13:15:14.331 UTC
36a6c89d-26a3-4420-84f1-6548b5a893a4
2013-01-31 11:45:36.60 UTC
e45ab87e-4aef-4e27-9cb2-6996bca88811
2013-01-18 14:23:04.208 UTC
47c4c3c8-896c-430d-bb00-899d253b2308
2013-01-31 12:11:22.252 UTC
1fc290a8-d5be-494b-bc2a-c08b0c1705a2
2013-01-31 12:23:39.281 UTC
7a7bbd57-bf34-4b66-bd97-d085a37dce6b
2013-01-18 13:43:32.415 UTC
d27fc20f-9957-4ba8-b7ea-999ac99fda50
2013-01-18 13:46:37.300 UTC
8db48588-d89c-4179-b9ac-fb49ce80365d
2013-01-18 14:23:37.595 UTC
46bfa32d-0929-4c54-a300-1fd999241ff6
2013-01-18 13:14:34.866 UTC
49a8f51f-e2de-4573-af93-53c01eaeb530
2013-01-31 12:23:03.876 UTC
a7ad767e-2ffe-4c35-a331-46c4493b9568
2013-01-31 12:05:56.745 UTC
dc364ced-28d9-4d3c-be4f-257fca5c3639
2013-01-18 14:05:03.590 UTC
7b6294fa-4c8c-4d11-9798-dbb327c37c12
2013-01-18 13:13:16.820 UTC
1da06956-3e64-47aa-a538-7ba80170460c
2013-01-18 13:12:08.988 UTC
Workflow20Sentinel00DummyOutText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Ciao
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessage0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
message
0
java.lang.String
true
title
0
java.lang.String
true
answer
0
0
tell
VelocityTemplate
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Convergence of MCMC reached!
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketellmessageDummyOut
6be543cf-0a7e-4305-b7fc-1efaee8b413c
2012-11-28 17:08:36.500 UTC
844a0428-c2a3-43f5-8f4f-d6609f20cc40
2013-01-31 10:56:51.471 UTC
ac938b2a-fe53-450b-8315-fd10b043ea40
2012-11-28 17:07:09.459 UTC
Workflow36JobID00StatusOutputStandardOutputREST_Service_2JobID0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/SelectJob?IdJob={JobID}
application/xml
application/xml
String
false
false
false
false
true
JobID
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs>
/Jobs/Job/Status
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://webtest.ba.infn.it/vicario/FinalFusariumDB_2.nex 5700.fa 10589.fbsse se selknlk noiho niooih r </Arguments><Comment>interactive</Comment><CPUs>7</CPUs><Flag>2dbbd030-2803-43c0-a21d-369a21e17f2b</Flag><Id>349177</Id><LastCheck>2011-11-18 12:54:01.0</LastCheck><Name>MyBlasts</Name><Output/><Provenance/><Status>free</Status></Job></Jobs>
/Jobs/Job/Output
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Service_2_2_2xml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Jobs><Job><Arguments>http://testjst.ba.infn.it/giacintoAraneaeNuc.fas 1,2,5 2e-10</Arguments><Comment>interactive</Comment><CPUs>1</CPUs><Flag>46d409fa-c716-4e69-8e2d-0286a2ddd11c</Flag><Id>454291</Id><LastCheck>2012-04-30 11:53:07.0</LastCheck><Name>ProfileFrameFinder</Name><Output/><Provenance/><StadardOutput> </StadardOutput><Status>2104118383</Status></Job></Jobs>
/Jobs/Job/StadardOutput
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Service_2JobIDXPath_Service_2xml_textMerge_String_List_to_a_StringstringlistXPath_Service_2_2xml_textMerge_String_List_to_a_String_2stringlistXPath_Service_2_2_2xml_textStatusOutputStandardOutput
5aef3e63-9bb3-4905-9214-52026f781425
2011-11-30 16:10:33.343 UTC
a86eb045-aff2-46b1-ad28-5aaa0ca632c8
2011-11-30 17:07:17.999 UTC
7463afe8-60dd-41ae-8777-bcbed7096d16
2012-05-03 07:47:09.188 UTC
cbc11548-e4ff-4019-8b24-e791c3461b38
2012-12-19 14:19:03.712 UTC
b0bac118-23c2-4a39-8623-ca8608fef0a8
2012-04-30 16:07:36.554 UTC
cdf36b60-31c3-441b-85ad-e8b0d3ede120
2011-11-30 16:25:32.213 UTC
6b0f9027-e279-4192-a48c-e7ebf0221d4b
2012-04-02 15:50:57.934 UTC
d55f213c-926c-42e9-8661-b736e95873aa
2011-11-30 16:18:57.829 UTC
b011ecbe-b67a-4fdb-b2cf-52a24af8b64c
2012-05-03 13:12:30.78 UTC
Workflow1File_name00InputBody00REST_Service_responseBodyREST_Service_statusREST_Service_redirectionREST_Servicefile_name0inputBody0responseBody00status00redirection00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
PUT
http://testjst.ba.infn.it/openacces/{file_name}
application/xml
application/xml
String
false
true
false
false
true
file_name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_Servicefile_nameREST_ServiceinputBodyREST_Service_responseBodyREST_Service_statusREST_Service_redirection
24d62224-217d-46d0-a08a-06b0d60caec4
2012-05-02 07:59:24.107 UTC
d56f22a8-96c1-4eb6-bf76-15cda0725ed8
2012-05-07 11:24:02.593 UTC
99b23eb4-ca64-4f27-b08c-bdf3864724e5
2012-05-05 05:33:41.165 UTC
5d1ef777-4da0-4af7-abc1-938cbd13b687
2012-05-05 05:39:03.774 UTC
0ad720e2-8bbd-4aed-96f5-756381173980
2012-04-24 12:19:06.97 UTC
b418f0df-28b8-497e-ac5d-a4b478911bd0
2012-05-01 08:36:38.8 UTC
2ee8114d-7999-4833-ba39-97ddb6ff067c
2012-05-03 15:43:09.120 UTC
90744424-a1a0-4107-b358-5e931c677e4a
2012-05-01 08:35:44.460 UTC
acb3452e-6be0-4669-9e84-22808ff471cc
2012-05-03 15:46:36.879 UTC
d6bd51d4-54a3-4e41-ab79-ee29ecca40cf
2012-05-03 15:34:45.183 UTC
8d4c37f0-a10b-465e-81aa-1c09938a3473
2012-05-01 08:37:47.922 UTC
580e799c-bc6e-42d7-a347-e10430e1af0a
2012-05-05 05:36:11.643 UTC
8513ae60-119a-414f-915e-bca0bb7a7734
2012-05-05 05:31:39.298 UTC
74b3d010-9e53-4df0-8513-43a9a1c30c86
2012-05-10 07:29:59.107 UTC
d5aa2bb0-c984-456c-9ec2-df78463f1914
2012-05-01 08:39:00.787 UTC
517fa4a1-06ee-4bd7-980e-5f63e13c2fb2
2012-05-04 08:52:59.585 UTC
49621bfe-01ef-4491-9a3e-d65911feb2a6
2012-05-24 16:26:53.940 UTC
288673db-e11c-4f6a-be9c-57b0c212979d
2012-04-30 14:48:27.139 UTC
ffce4883-3f94-487f-9c25-e2e7bcdeb244
2012-05-06 19:42:14.223 UTC
d1b49247-0c82-443c-acb1-bab1044296f4
2012-04-30 14:42:33.401 UTC
aff47fd7-0af5-47c0-afc2-a6f5ab27b564
2012-04-30 14:16:40.142 UTC
ce6b1735-eb91-4d53-8e9b-ff43089857cd
2012-05-02 12:54:46.975 UTC
Decodebase64tobyteBase6400out
application/octet-stream
2013-01-30 15:59:22.993 UTC
text/plain
2013-01-30 15:59:22.993 UTC
Byte___to_Stringbytes0string00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
bytes
0
'application/octet-stream'
[B
true
string
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.ByteArrayToString
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
0
0
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDecode_base64_to_bytebase640bytes00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
base64
0
'text/plain'
java.lang.String
true
bytes
0
'application/octet-stream'
0
workflow
commons-codec
commons-codec
1.3
1635363350
commons-codec:commons-codec:1.3
org.embl.ebi.escience.scuflworkers.java.DecodeBase64
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
0
0
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeByte___to_StringbytesDecode_base64_to_bytebase64out
Decode base64 to byte[]
2013-01-30 15:59:23.202 UTC
607cb62e-f538-4b10-ad4d-520d0ab55a1b
2013-01-30 15:59:27.796 UTC
71336a3e-4333-414a-854a-3ca73880f998
2013-01-30 16:08:09.844 UTC
Alan R Williams
2013-01-30 15:59:23.202 UTC
The decode base64 to byte[] service decodes the base64 string. The byte array is then converted into the string 'Hello world'.
2013-01-30 15:59:23.202 UTC
Workflow1GenePartition00
Gene1_pos1 = 1-789\3;
Gene1_pos2 = 2-789\3;
Gene1_pos3 = 3-789\3;
Gene2_pos1 = 790-1449\3;
Gene2_pos2 = 791-1449\3;
Gene2_pos3 = 792-1449\3;
Gene3_pos1 = 1450-2208\3;
Gene3_pos2 = 1451-2208\3;
Gene3_pos3 = 1452-2208\3;
2012-11-12 15:44:26.975 UTC
TestPartitionDefBLText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
linked,unlinked
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionstring0regex0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string
0
'text/plain'
java.lang.String
true
regex
0
'text/plain'
java.lang.String
true
split
1
l('text/plain')
1
workflow
org.embl.ebi.escience.scuflworkers.java.SplitByRegex
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
,
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAddLinestring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-11-12 16:07:38.633 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeText_constant_2value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
alignment = test.phy;
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expression_2regex0string0net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string
0
'text/plain'
java.lang.String
true
regex
0
'text/plain'
java.lang.String
true
split
1
l('text/plain')
1
workflow
org.embl.ebi.escience.scuflworkers.java.SplitByRegex
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
raxml,mrbayes
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAddLine_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-11-12 16:09:44.412 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expression_2_2regex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string
0
'text/plain'
java.lang.String
true
regex
0
'text/plain'
java.lang.String
true
split
1
l('text/plain')
1
workflow
org.embl.ebi.escience.scuflworkers.java.SplitByRegex
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring_value_1value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
AIC,AICc,BIC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAddLine_2_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-11-12 16:09:57.482 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expression_2_2_2regex0string0split11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string
0
'text/plain'
java.lang.String
true
regex
0
'text/plain'
java.lang.String
true
split
1
l('text/plain')
1
workflow
org.embl.ebi.escience.scuflworkers.java.SplitByRegex
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_value_1value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
\n
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeAddLine_2_2_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-11-12 16:05:42.919 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring1_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
branchlengths =
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_strings_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring1_value_1value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
models =
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_strings_2_2string10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring1_value_2value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
model_selection =
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeBranchLengthsLinkselectionValues1message0answers11net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
selectionValues
1
text/plain
java.lang.String
false
message
0
text/plain
java.lang.String
false
title
0
text/plain
java.lang.String
false
answers
1
1
http://www.mygrid.org.uk/taverna/internal/biovel/multiple_checkbox.html
LocallyPresentedHtml
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeStatCriteriumselectionValues1message0answers11net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
selectionValues
1
text/plain
java.lang.String
false
message
0
text/plain
java.lang.String
false
title
0
text/plain
java.lang.String
false
answers
1
1
http://www.mygrid.org.uk/taverna/internal/biovel/multiple_checkbox.html
LocallyPresentedHtml
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePartitionSetsselectionValues1message0answers11net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
selectionValues
1
text/plain
java.lang.String
false
message
0
text/plain
java.lang.String
false
title
0
text/plain
java.lang.String
false
answers
1
1
http://www.mygrid.org.uk/taverna/internal/biovel/multiple_checkbox.html
LocallyPresentedHtml
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFlatten_Listinputlist2outputlist11net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
inputlist
2
l(l(''))
[B
true
outputlist
1
l('')
1
workflow
org.embl.ebi.escience.scuflworkers.java.FlattenList
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_Stringstringlist1seperator0concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeseperator_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Branch lengths are shared across partitions (linked) or independent (unlinked)?
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_value_2value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
What statistical criterium should be used to compare different models?
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_value_3value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
What partitions should be taken in consideration?
Check that partitions are not overlapping.
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokestring2_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
mrbayes
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_string_list_by_regular_expressionstringSplit_string_into_string_list_by_regular_expressionregexAddLinestring1AddLinestring2Split_string_into_string_list_by_regular_expression_2regexSplit_string_into_string_list_by_regular_expression_2stringAddLine_2string1AddLine_2string2Split_string_into_string_list_by_regular_expression_2_2regexSplit_string_into_string_list_by_regular_expression_2_2stringAddLine_2_2string1AddLine_2_2string2Split_string_into_string_list_by_regular_expression_2_2_2regexSplit_string_into_string_list_by_regular_expression_2_2_2stringAddLine_2_2_2string1AddLine_2_2_2string2Concatenate_two_stringsstring1Concatenate_two_stringsstring2Concatenate_two_strings_2string1Concatenate_two_strings_2string2Concatenate_two_strings_2_2string1Concatenate_two_strings_2_2string2BranchLengthsLinkselectionValuesBranchLengthsLinkmessageStatCriteriumselectionValuesStatCriteriummessagePartitionSetsselectionValuesPartitionSetsmessageFlatten_ListinputlistMerge_String_List_to_a_StringstringlistMerge_String_List_to_a_StringseperatorTestPartitionDefBL
bea60039-1487-408e-ab7f-ae9fbf3d0e26
2012-11-12 15:32:00.915 UTC
f2abe179-d96a-4d3b-9e4a-a360a9030520
2012-11-12 15:19:19.643 UTC
50f0cff2-6fd6-4d18-85c5-df126f1e342b
2013-01-30 09:17:38.323 UTC
f56367cd-8876-40d9-b0e0-45502d85c6a0
2013-01-30 09:04:48.43 UTC
286a69c3-6302-4d1c-a787-278fad080727
2012-11-12 16:01:05.954 UTC
cfb3e923-7c55-4f0a-bf14-569bd22cc752
2012-11-12 16:14:10.632 UTC
097e1982-0bac-4a21-b3a8-d7767c39fe23
2012-11-12 15:29:11.584 UTC
91948479-872a-477b-b56b-073869d927cb
2013-02-18 14:48:42.299 UTC
5295583d-9241-4c02-9979-4c2e86ba3925
2013-02-01 17:23:06.830 UTC
1f8a34d0-dc3b-4b1c-b137-b046eda1474f
2012-11-12 16:08:46.864 UTC
401434ba-30e7-4440-8bdf-ed46318b28fa
2012-11-12 17:50:35.946 UTC
9e91858b-9426-48b9-a804-644955ec199e
2012-11-12 08:22:58.858 UTC
437e3da5-f933-4b84-adee-f7b15d2be6a7
2013-01-30 13:45:17.16 UTC
70d3be26-9ac3-4d0b-a1ea-54be33c25866
2013-01-30 09:12:57.275 UTC
56efae61-d700-404c-ae00-917990e6f177
2012-11-14 11:42:15.476 UTC
7301d737-5a02-448e-9c2e-593e534260fa
2012-11-12 08:24:05.103 UTC
0c74aa00-88fe-4054-8a36-fe079271288b
2013-02-18 14:47:57.525 UTC
3f130b52-a27d-46e1-bf95-0b8901491a21
2013-02-05 07:57:16.896 UTC
5bed52c2-7274-42c2-ba5c-602a84244b10
2013-01-30 09:14:54.76 UTC
7861a683-4ce4-46a3-b3df-244b1e8f71d5
2013-02-05 09:47:42.150 UTC
fb12cc76-5149-4ab6-8672-9925934d28e3
2012-11-14 11:58:50.736 UTC
6957a2cb-0985-4c20-94b7-31075e70f908
2012-11-12 16:10:04.480 UTC
Workflow14jobID00StatusOutput_PathFastaFileWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>Status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + ! Status.equals("done");
if ("true".matches(loop)) {
Thread.sleep(2000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobIDStatusOutput_PathFastaFile
97c8a203-1938-4e3f-90f3-87694c3a795a
2011-11-30 15:59:45.57 UTC
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
f209eccd-51b2-48c5-ba45-48f6327a7468
2013-02-19 13:57:48.348 UTC
38b1f6f3-d29c-408a-9360-46930d61cff7
2012-05-04 09:55:44.596 UTC
3aba8bc3-36ee-473d-a504-288a1f9998df
2011-11-30 16:07:49.591 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
be8cd221-9345-4c91-9fb4-b413978b0a6a
2011-11-30 16:05:00.470 UTC
eb0a0648-1196-4215-b698-acb8729bf045
2011-11-30 15:47:24.13 UTC
36001f84-a643-4173-80ee-118a0ceaecbc
2011-11-30 17:10:08.264 UTC
a65689de-3539-4833-9e3e-c32aa9237d39
2011-11-30 15:52:17.202 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
bcc60618-7449-4965-b39d-d0d6d90ec7db
2011-11-30 15:49:46.56 UTC
5f07e956-6857-4261-ae1e-1ab5ba32ab08
2011-11-30 16:07:05.176 UTC
e2682dca-1389-49ad-a886-491fa918d268
2011-11-30 15:54:01.684 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
2011-11-30 15:53:41.975 UTC
a3848c5b-b720-4bc7-8e8a-d0a4e305b43f
2012-04-02 16:09:05.883 UTC
bed4b280-a552-4ad9-8bfe-54a2fabae11f
2012-04-05 09:41:33.486 UTC
0ca845f5-dbee-4c11-8b69-2843a6c7e40e
2012-05-03 15:26:02.481 UTC
25d638c9-672c-498e-913b-4bceb4230f8e
2011-11-30 17:10:59.924 UTC
2bb836b5-2738-4f3f-864d-5a77e76bdd1f
2011-11-30 17:09:13.282 UTC
b9cf606e-166f-471c-b51e-d2f517526ad1
2011-11-30 17:00:56.590 UTC
0b2a7cd3-3853-434d-b462-4a2d7796ea7d
2011-11-30 15:48:49.960 UTC
4cc9395d-b178-451b-aef7-a34678d0d490
2011-11-30 15:51:55.76 UTC
15c52e11-e32b-46b2-857c-89226396dc45
2011-11-30 15:41:58.998 UTC
a2b6b247-c946-4883-8d6d-469ea6573f93
2011-11-30 15:51:07.192 UTC
745b7346-e8be-4864-ba02-1ae1d255f50d
2012-04-05 09:28:59.571 UTC
bda5ff28-ff17-4ff2-9191-13acd55b73f3
2011-11-30 17:07:35.484 UTC
7b7863ae-a026-4317-8084-9a00049fccf8
2012-04-05 11:23:09.57 UTC
Workflow14Name00Argument00StatusOutput_PathGeoKS_ResultREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments}
application/xml
application/xml
String
false
false
false
false
true
arguments
java.lang.String
name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job>
/Job/JobsID/JobId
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeWorkflow36JobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>Status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + ! Status.equals("done");
if ("true".matches(loop)) {
Thread.sleep(5000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameREST_ServiceargumentsXPath_Servicexml_textWorkflow36JobIDStatusOutput_PathGeoKS_Result
b9cf606e-166f-471c-b51e-d2f517526ad1
2011-11-30 17:00:56.590 UTC
2bb836b5-2738-4f3f-864d-5a77e76bdd1f
2011-11-30 17:09:13.282 UTC
a2b6b247-c946-4883-8d6d-469ea6573f93
2011-11-30 15:51:07.192 UTC
172155eb-f362-4e26-a727-3dadee48b001
2012-06-08 08:32:03.597 UTC
5f07e956-6857-4261-ae1e-1ab5ba32ab08
2011-11-30 16:07:05.176 UTC
38b1f6f3-d29c-408a-9360-46930d61cff7
2012-05-04 09:55:44.596 UTC
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
15c52e11-e32b-46b2-857c-89226396dc45
2011-11-30 15:41:58.998 UTC
0b2a7cd3-3853-434d-b462-4a2d7796ea7d
2011-11-30 15:48:49.960 UTC
36001f84-a643-4173-80ee-118a0ceaecbc
2011-11-30 17:10:08.264 UTC
97c8a203-1938-4e3f-90f3-87694c3a795a
2011-11-30 15:59:45.57 UTC
bcc60618-7449-4965-b39d-d0d6d90ec7db
2011-11-30 15:49:46.56 UTC
7b7863ae-a026-4317-8084-9a00049fccf8
2012-04-05 11:23:09.57 UTC
bed4b280-a552-4ad9-8bfe-54a2fabae11f
2012-04-05 09:41:33.486 UTC
3aba8bc3-36ee-473d-a504-288a1f9998df
2011-11-30 16:07:49.591 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
eb0a0648-1196-4215-b698-acb8729bf045
2011-11-30 15:47:24.13 UTC
cd9f15fa-0819-4ddd-b6ab-6778ac424da1
2012-06-08 09:36:42.175 UTC
25d638c9-672c-498e-913b-4bceb4230f8e
2011-11-30 17:10:59.924 UTC
a3848c5b-b720-4bc7-8e8a-d0a4e305b43f
2012-04-02 16:09:05.883 UTC
a65689de-3539-4833-9e3e-c32aa9237d39
2011-11-30 15:52:17.202 UTC
745b7346-e8be-4864-ba02-1ae1d255f50d
2012-04-05 09:28:59.571 UTC
be8cd221-9345-4c91-9fb4-b413978b0a6a
2011-11-30 16:05:00.470 UTC
bda5ff28-ff17-4ff2-9191-13acd55b73f3
2011-11-30 17:07:35.484 UTC
0ca845f5-dbee-4c11-8b69-2843a6c7e40e
2012-05-03 15:26:02.481 UTC
e2682dca-1389-49ad-a886-491fa918d268
2011-11-30 15:54:01.684 UTC
4cc9395d-b178-451b-aef7-a34678d0d490
2011-11-30 15:51:55.76 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
2011-11-30 15:53:41.975 UTC
Workflow14Argument00StatusOutput_PathNewickTreesREST_Servicearguments0name0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments}
application/xml
application/xml
String
false
false
false
false
true
arguments
java.lang.String
name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job>
/Job/JobsID/JobId
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeResultsRetrieving_ConsensusJobID0Status00Output00StandardOuput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
<name>Status</name>
<depth>0</depth>
<translatedElementType>java.lang.String</translatedElementType>
<allowsLiteralValues>true</allowsLiteralValues>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean>
</inputs>
<outputs>
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
<name>loop</name>
<depth>0</depth>
<granularDepth>0</granularDepth>
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean>
</outputs>
<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
<artifactDependencies />
<script>loop = "" + ! Status.equals("done");
if ("true".matches(loop)) {
Thread.sleep(5000);
}</script>
<dependencies />
</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeconsensus_xmlvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
consensus_xml
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServiceargumentsREST_ServicenameXPath_Servicexml_textResultsRetrieving_ConsensusJobIDStatusOutput_PathNewickTrees
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
36001f84-a643-4173-80ee-118a0ceaecbc
2011-11-30 17:10:08.264 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
5f07e956-6857-4261-ae1e-1ab5ba32ab08
2011-11-30 16:07:05.176 UTC
a2b6b247-c946-4883-8d6d-469ea6573f93
2011-11-30 15:51:07.192 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
2011-11-30 15:53:41.975 UTC
7b7863ae-a026-4317-8084-9a00049fccf8
2012-04-05 11:23:09.57 UTC
38b1f6f3-d29c-408a-9360-46930d61cff7
2012-05-04 09:55:44.596 UTC
15c52e11-e32b-46b2-857c-89226396dc45
2011-11-30 15:41:58.998 UTC
3aba8bc3-36ee-473d-a504-288a1f9998df
2011-11-30 16:07:49.591 UTC
e2682dca-1389-49ad-a886-491fa918d268
2011-11-30 15:54:01.684 UTC
0b2a7cd3-3853-434d-b462-4a2d7796ea7d
2011-11-30 15:48:49.960 UTC
2bb836b5-2738-4f3f-864d-5a77e76bdd1f
2011-11-30 17:09:13.282 UTC
03dca5b4-05db-47ed-9c8c-69551b1653e8
2012-09-21 14:59:11.614 UTC
bda5ff28-ff17-4ff2-9191-13acd55b73f3
2011-11-30 17:07:35.484 UTC
bcc60618-7449-4965-b39d-d0d6d90ec7db
2011-11-30 15:49:46.56 UTC
eb0a0648-1196-4215-b698-acb8729bf045
2011-11-30 15:47:24.13 UTC
4cc9395d-b178-451b-aef7-a34678d0d490
2011-11-30 15:51:55.76 UTC
172155eb-f362-4e26-a727-3dadee48b001
2012-06-08 08:32:03.597 UTC
745b7346-e8be-4864-ba02-1ae1d255f50d
2012-04-05 09:28:59.571 UTC
5688bad2-fad3-4ffb-847b-f17902899809
2012-09-21 10:06:17.749 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
be8cd221-9345-4c91-9fb4-b413978b0a6a
2011-11-30 16:05:00.470 UTC
a65689de-3539-4833-9e3e-c32aa9237d39
2011-11-30 15:52:17.202 UTC
97c8a203-1938-4e3f-90f3-87694c3a795a
2011-11-30 15:59:45.57 UTC
25d638c9-672c-498e-913b-4bceb4230f8e
2011-11-30 17:10:59.924 UTC
bed4b280-a552-4ad9-8bfe-54a2fabae11f
2012-04-05 09:41:33.486 UTC
b9cf606e-166f-471c-b51e-d2f517526ad1
2011-11-30 17:00:56.590 UTC
736db278-dce1-4fc7-bc82-4db29920f6b7
2012-10-01 14:31:19.648 UTC
a3848c5b-b720-4bc7-8e8a-d0a4e305b43f
2012-04-02 16:09:05.883 UTC
0ca845f5-dbee-4c11-8b69-2843a6c7e40e
2012-05-03 15:26:02.481 UTC
cd9f15fa-0819-4ddd-b6ab-6778ac424da1
2012-06-08 09:36:42.175 UTC
Workflow14Name00Argument00JobIDREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments}
application/xml
application/xml
String
false
false
false
false
true
arguments
java.lang.String
name
java.lang.String
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job>
/Job/JobsID/JobId
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameREST_ServiceargumentsXPath_Servicexml_textJobID
25d638c9-672c-498e-913b-4bceb4230f8e
2011-11-30 17:10:59.924 UTC
4cc9395d-b178-451b-aef7-a34678d0d490
2011-11-30 15:51:55.76 UTC
2bb836b5-2738-4f3f-864d-5a77e76bdd1f
2011-11-30 17:09:13.282 UTC
e2682dca-1389-49ad-a886-491fa918d268
2011-11-30 15:54:01.684 UTC
a2b6b247-c946-4883-8d6d-469ea6573f93
2011-11-30 15:51:07.192 UTC
eb0a0648-1196-4215-b698-acb8729bf045
2011-11-30 15:47:24.13 UTC
745b7346-e8be-4864-ba02-1ae1d255f50d
2012-04-05 09:28:59.571 UTC
a65689de-3539-4833-9e3e-c32aa9237d39
2011-11-30 15:52:17.202 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
2011-11-30 15:53:41.975 UTC
38b1f6f3-d29c-408a-9360-46930d61cff7
2012-05-04 09:55:44.596 UTC
97c8a203-1938-4e3f-90f3-87694c3a795a
2011-11-30 15:59:45.57 UTC
3aba8bc3-36ee-473d-a504-288a1f9998df
2011-11-30 16:07:49.591 UTC
0ca845f5-dbee-4c11-8b69-2843a6c7e40e
2012-05-03 15:26:02.481 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
bc601486-bec4-4b2c-a46e-ea71c6fab18e
2013-02-19 07:43:01.213 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
bed4b280-a552-4ad9-8bfe-54a2fabae11f
2012-04-05 09:41:33.486 UTC
a3848c5b-b720-4bc7-8e8a-d0a4e305b43f
2012-04-02 16:09:05.883 UTC
7b7863ae-a026-4317-8084-9a00049fccf8
2012-04-05 11:23:09.57 UTC
5f07e956-6857-4261-ae1e-1ab5ba32ab08
2011-11-30 16:07:05.176 UTC
36001f84-a643-4173-80ee-118a0ceaecbc
2011-11-30 17:10:08.264 UTC
bda5ff28-ff17-4ff2-9191-13acd55b73f3
2011-11-30 17:07:35.484 UTC
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
be8cd221-9345-4c91-9fb4-b413978b0a6a
2011-11-30 16:05:00.470 UTC
15c52e11-e32b-46b2-857c-89226396dc45
2011-11-30 15:41:58.998 UTC
0b2a7cd3-3853-434d-b462-4a2d7796ea7d
2011-11-30 15:48:49.960 UTC
b9cf606e-166f-471c-b51e-d2f517526ad1
2011-11-30 17:00:56.590 UTC
bcc60618-7449-4965-b39d-d0d6d90ec7db
2011-11-30 15:49:46.56 UTC
Workflow31NewickString00DummyOutputPhylowidgetUrl_FormatNewickString0output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
NewickString
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2012-09-27 14:39:23.133 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeOpen_web_browser_at_a_URLurl0net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
url
0
text/plain
java.lang.String
true
workflow
net.sourceforge.taverna.scuflworkers.net.BrowseUrl
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeString_Dummyvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Dummy
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokePhylowidgetUrl_FormatNewickStringOpen_web_browser_at_a_URLurlDummyOutput
51ceffe6-96f1-4c6a-90dd-3f1592ae64ef
2012-09-19 13:43:51.58 UTC
e5db23d7-2d15-4289-a578-848005d60517
2012-10-01 10:21:11.664 UTC
708f85ff-84f0-4cbf-9b1a-d51ee37546d0
2012-09-19 14:20:01.726 UTC
8466c904-a52b-4cc0-b17c-fb262ace7e2a
2012-10-01 10:20:05.561 UTC
dcf9de06-cf7c-4eea-b489-02191f6ca434
2012-09-19 14:17:48.154 UTC
78ac2c65-bf08-4d50-81a5-e08a5a57a84b
2012-09-27 14:39:35.106 UTC
fd4ec537-c4ae-4723-bdda-806c22763297
2012-09-19 13:53:54.502 UTC
4506e1eb-0813-4cd1-aac7-cd0b709a8037
2012-09-19 13:58:10.513 UTC
b4cfd2e4-e9ce-4e4e-9682-b1121b3d5c2b
2012-09-27 14:48:25.177 UTC
173b1324-1c04-4f17-aec5-ae978e4ca45c
2012-09-19 14:15:51.875 UTC
Workflow20Sentinel00DummyOutText_constantvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Ciao
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
MCMC numerical integration failed to converge. It is recommended to run MrBayes with more generations.
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketellmessage0title0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
message
0
java.lang.String
true
title
0
java.lang.String
true
answer
0
0
tell
VelocityTemplate
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketitle_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Convergence Failed
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvoketellmessagetelltitleDummyOut
7a13a605-e452-4af0-bb33-cff662b89278
2012-11-28 17:12:13.145 UTC
6be543cf-0a7e-4305-b7fc-1efaee8b413c
2012-11-28 17:08:36.500 UTC
ac938b2a-fe53-450b-8315-fd10b043ea40
2012-11-28 17:07:09.459 UTC
Selecting_EvolutionaMSA_fasta00
>ABY27676/1-453 ABY27676
------------------------------------------------------------------------
------------------------------------------------------------------------
------------------------------------------------------------TTAATATTAGGA
GCTCCAGATATAGCTTTTCCTCGAATAAATAATCTTAGTTTTTGGTTGCTTCCTCCTTCTTTGATTTTATTA
ATAATTTCTTCAATAGTGGAGATAGGGGTTGGGGCGGGGTGAACTATTTATCCTCCTTTATCGGGTAGTCTA
GGTCATTCAGGGGTTTCAGTAGATTTAGCTATTTTTAGCTTACATTTGGCGGGAGCTTCTTCAATTATAGGA
GCAATTAATTTTATTTCCACTATTTTAAATATACGTTCAGTTGGGATATCTATAGATAAGGTACCTTTATTT
GTGTGATCTGTATTAGTTACTGCTGTTTTATTATTATTATCTTTACCAGTTTTAGCCTGGGGTATTACGATA
TTATTAACAGATCGAAATTTTAACACTTCTTTTTTTGACCCTGCGGGTGGAGGTGATCCAATTTTATTTCAA
CATCTTTTT
>ADW61587/1-657 ADW61587
ACGTTATATTTAATATTTGGGGCTTGAGCTGCTATAGTAGGAACAGCCATAAGAGTATTAATTCGAATTGAA
TTAGGTCAACCTGGGAGGTTTATTGGGGATGATCAATTATATAATGTAATCGTTACTGCTCATGCATTTGTT
ATAATTTTTTTTATAGTAATACCTATTTTGATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGC
GCTCCTGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGCTACTCCCTCCTTCATTATTTTTATTA
ATTATTTCTTCTATAGTAGAAATGGGAGTGGGGGCAGGATGGACGGTTTATCCTCCTTTAGCTAGTTTAGAG
GGCCATGCTGGCAGGTCAGTGGATTTTGCTATTTTTTCTTTACATTTAGCGGGGGCCTCCTCTATTATGGGG
GCTATTAATTTTATTTCTACTATTATTAATATACGATCGCATGGAATAACTATAGAAAAAGTACCTTTATTT
GTATGATCAGTATTGATTACTGCTGTATTATTATTATTATCACTTCCAGTATTGGCGGGGGCTATCACAATA
TTATTAACTGATCGAAATTTTAATACTTCGTTTTTTGACCCTTCAGGAGGGGGGGATCCAATCCTTTTCCAA
CATTTATTT
>AEE92862/1-657 AEE92862
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATGGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>AEC60810/1-657 AEC60810
ACTTTGTATTTATTGTTTGGTATTTGATCTGCTATAATGGGAACGGCAATAAGAGTGATTATTCGAATTGAA
TTAGGTCAAGTTGGAAGATTGTTGGGTGATGATCATTTATATAATGTAATTGTAACAGCACATGCTTTGGTT
ATGATTTTTTTTATAGTTATACCGATTTTGATTGGTGGATTTGGAAATTGAATAGTTCCTTTGATGTTAGGT
GCTCCAGATATAGCATTCCCACGTATAAATAATTTGAGATTTTGATTGCTTCCTCCATCATTATTTTTGTTA
TTATTATCTTCTTTAACAGATGTAGGGGTTGGAGCCGGGTGAACTATTTATCCTCCTTTATCCTCTGGGGTT
GGACATAGAGGGGGGGGGATGGATTTTGCTATTTTTTCTTTACATTTAGCAGGAGCTTCATCTATTATAGGG
GCGATTAATTTTATTACAACAATTATTAATATGCGAAGATTTGGAATAACAATAGAACGTGTACCTTTATTT
GTGTGATCAGTTCTTATTACTACTATTTTATTATTGCTTTCTTTACCTGTATTGGCTGGTGCTATTACTATA
TTGTTGACTGATCGAAATTTCAATACTTCTTTTTTTGATCCTGCTGGAGGTGGTGATCCTATTTTGTTTCAA
CATTTATTT
>AEE92861/1-633 AEE92861
------------------------TGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAATATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>AEE92860/1-648 AEE92860
---------TTTGTTTTTGGAGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADD09384/1-555 ADD09384
------------------------------------------------------------------------
------------------------------TATCAGCTATACAATGTATTAATTACCGCTCATGCTATAATT
ATGGTATTTTTCATGATTATGCCAGCTTTATTTGGTGGATTTGGTAATTACTTTGTACCAATTTTAATAGGT
GCCCCGGATATGGCTTTTCCTAGGCTAAATAATATAAGTTTTTGGCTACTTGTCCCTGCTTTTATATTATTA
ATGCTGTCAGGTTTGGTTGATGGAGGAGCTGGTACTGGCTGGACACTGTATCCTCCTCTAAGTAGTATAGTA
GGGCATCCTGGCGCTGCTGTCGATATGGCTATTTTAAGCTTACATCTTACAGGGCTTTCCTCCATTCTTGGT
TCAATTAATATGATTGTCACTATCTTTAATATGAGAACTGATGGTATGGGGTTATTTGAAATGCCCTTATTT
GTTTGGTCAATTTTGGTTACTGCCTTCTTGCTGATACTAGCAATTCCTGTGTTAGGGGGTGCAATAACCATG
TTACTGACTGATCGAAATTTTGGTACTACTTTTTTCAAGCCTGATGGTGGCGGAGATCCAGTGTTATTTCAG
CATTTATTT
>ADJ82639/1-645 ADJ82639
ACTTTATATTTAATGTTTGGGGTTTGGTCAGCTATAATAGGAACTGCTATAAGAGTATTAATTCGAATGGAA
TTAGGGAATCCTGGTAGATTGTTAGGTGATGATCATTTGTATAATGTTATAGTTACTGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTAATGCCTATTCTTATTGGAGGTTTTGGAAATTGATTAGTTCCTTTAATATTAGGA
GCTCCAGATATATCATTTCCTCGAATAAATAATCTTTCTTTTTGATTATTACCTCCTTCTTTATTTTTGTTA
TCTATATCTTCTATAGTAGAAATAGGAGTTGGGGCTGGGTGAACTGTTTATCCTCCTTTAGCGTCTACAGTT
GGGCACATAGGAAATTCAATAGATTTTGCTATTTTTTCTCTTCATTTAGCTGGAGCTTCTTCTATTATAGGA
GCTGTAAATTTTATTTCTACCATTATTAATATACGAATATTAGGAATATCTATAGAGAAGGTTCCTCTTTTT
GTTTGATCAGTTTTAATTACAGCAGTATTATTATTACTTTCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACAGATCGAAATTTTAATACTTCTTTTTTTGATCCTGCTGGGGGAGGAGATCCTAATTTATTT---
---------
>ADQ21240/1-648 ADQ21240
AGATTATATTTTGTTTTTGGGGCTTGAGCTGCTATAGTAGGAACAGCAATAAGAGTATTAATTCGTGTTGAG
TTGGGACAAACTGGTAGTTTGTTAGGGGATGATCAGTTGTATAATGTTATTGTTACGGCTCATGCTTTTGTA
ATAATTTTTTTTATAGTTATGCCTATTTTAATTGGGGGTTTTGGAAATTGGCTGATTCCACTAATACTAGGA
GCTCCGGATATAGCTTTCCCTCGTATAAATAATTTGAGATTTTGGCTTTTACCCCCTTCTTTATTATTACTG
TTTATTTCAAGCATAGATGAGATAGGAGTGGGGGCGGGATGAACGGTTTACCCCCCTCTTGCCTCTTTAGAG
GGACATTCTGGTAGTTCAGTAGATTTTGCTATTTTTTCTTTACACTTAGCTGGAGCGTCTTCTATTATAGGG
GCTATTAATTTTATTTCCACAATTTTGAATATACGGGGTTATGGAATATCTATAGAAAAAGTACCTTTATTT
GTTTGGTCCGTGTTAATTACAGCTGTATTATTATTGTTATCTCTTCCTGTGTTAGCTGGGGCTATCACAATA
TTACTGACGGATCGTAATTTTAATACTTCATTTTTTGATCCTTGTGGGGGGGGGGATCCTGTTTTGTTTCAA
---------
>AEE92882/1-657 AEE92882
ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATTGTAACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATA
TTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAG
CATTTATTT
>ADW58691/1-657 ADW58691
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTATTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGTTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATGGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ADW58631/1-657 ADW58631
ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAA
TTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTT
ATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGT
GCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTACTACCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATAGCTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTA
GGTCATATAGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGA
GCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTT
GTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATA
TTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAA
CATTTATTT
>ACM89220/1-657 ACM89220
ACTTTATATTTTTTATTTGGTACTTGATCAGCAATAATTGGTACAGCAATAAGTGTTTTAATTCGTGTTGAA
CTAGGATTTTCTGGAAGATTTTTAGGTGATGATCATTTATATAATGTAATTGTTACTGCTCATGCTTTTATT
ATAATTTTTTTTATAGTTATACCTATTTTAATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAAGA
GCTCCAGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGTTACTACCTCCTTCGTTATTATTGTTA
TTTATTTCTTCTATGGTTGAAATCGGAGTTGGAGCAGGGTGGACTATTTATCCTCCTTTATCTTCTTCTGTG
GGTCATTCTGGTGCATCTATGGATTTTGCAATTTTTTCTCTTCATTTAGCTGGTGCTTCTTCTATTATAGGT
GCTATTAATTTTATTTCAACAATTATTAATATACGACCTTATGGTATAAGAATAGAAAAGATTCCTTTATTT
GTATGATCTGTATTAATTACAGCTGTCTTATTATTATTATCATTACCAGTATTAGCTGGGGCTATTACTATA
CTTTTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCAGCTGGGGGTGGGGATCCAATTTTATTTCAG
CATTTATTT
>AEE92867/1-642 AEE92867
---------------TTTGGGGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAG
TTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTA
ATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGA
GCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTG
GTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTT
GGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGG
GCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTT
GTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATA
TTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAA
CATTTATTT
>ADH12119/1-645 ADH12119
ACTTTATACTTGGTTTTTGGTGCTTGAGCGGCTATGGTTGGAACTGCAATAAGTGTTTTAATTCGAATTGAG
TTGGGGCAATCTGGTAGATTTATGGGAGATGATCAGTTGTATAATGTTATTGTAACTGCTCATGCTTTTGTT
ATAATTTTTTTTATGGTTATGCCTATTTTGATTGGGGGCTTTGGTAATTGACTGGTTCCTTTGATGTTGGGG
GCTCCTGATATGGCTTTTCCTCGCATGAATAATTTAAGGTTTTGATTATTGCCTCCTTCTTTATTTTTATTA
TTTATTTCTTCTATGGTGGAAATAGGGGTTGGGGCTGGTTGAACGATCTACCCTCCTTTAGCGTCTCTAGAA
GGACATTCAGGAAGTTCGGTTGATTTTGCCATTTTTTCTTTGCATTTGGCTGGGGCCTCTTCTATTATAGGG
GCTATTAATTTTATTTCTACAATTTTGAATATACGGTCTTATGGGATGTCTATGGAAAAAGTTCCTTTGTTT
GTTTGGTCGGTTTTAATTACTGCTGTTTTGCTCCTATTATCACTTCCGGTTTTAGCTGGGGCTATCACTATG
TTATTAACTGATCGAAATTTTAATACATCGTTTTTTGATCCTTCGGGGGGAGGGGATCCTATTTTTTTT---
---------
2013-02-05 15:52:46.438 UTC
Multiple Sequence Alignment (MSA) in fasta format
2013-02-05 15:53:08.681 UTC
PossiblePartition00
Gene1_pos1 = 1-657\3;
Gene1_pos2 = 2-657\3;
Gene1_pos3 = 3-657\3;
2013-02-05 15:53:24.969 UTC
Partitioning of the MSA using nexus/raxml -like syntax
2013-02-05 15:54:20.767 UTC
Path
Path to obtain full folder of ouput of PartitionFinder
2013-02-05 15:58:50.495 UTC
PartitionFinderOuput
Best scheme according to Greedy algorithm, analysed with aic
Scheme Name : 1
Scheme lnL : -3580.51738
Scheme AIC : 7267.03476
Scheme AICc : 7276.52729731
Scheme BIC : 7504.88201298
Num params : 53
Num sites : 657
Num subsets : 3
Subset | Best Model | Subset Partitions | Subset Sites | Alignment
1 | GTR+I+G | Gene1_pos1 | 1-657\3 | ./analysis/phyml/50bf1643d2a386419c9264eccd173b6b.phy
2 | GTR+G | Gene1_pos2 | 2-657\3 | ./analysis/phyml/70bf411485fb1fe3503bc4f094e24b4a.phy
3 | HKY+G | Gene1_pos3 | 3-657\3 | ./analysis/phyml/2d8c90733ab81be78313d5cf934c6639.phy
Scheme Description in PartitionFinder format
Scheme_1 = (Gene1_pos1) (Gene1_pos2) (Gene1_pos3);
RaxML-style partition definitions
DNA, p1 = 1-657\3
DNA, p2 = 2-657\3
DNA, p3 = 3-657\3
2013-02-05 15:55:19.431 UTC
Text output of best model description of PartitionFinder program
2013-02-05 15:54:51.565 UTC
MrBayesInput
#Nexus
begin data;
dimensions ntax=15 nchar=657;
format datatype=dna interleave=no gap=- missing=? Matchchar=.;
matrix
ABY27676/1-453_ABY27676 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATATTAGGAGCTCCAGATATAGCTTTTCCTCGAATAAATAATCTTAGTTTTTGGTTGCTTCCTCCTTCTTTGATTTTATTAATAATTTCTTCAATAGTGGAGATAGGGGTTGGGGCGGGGTGAACTATTTATCCTCCTTTATCGGGTAGTCTAGGTCATTCAGGGGTTTCAGTAGATTTAGCTATTTTTAGCTTACATTTGGCGGGAGCTTCTTCAATTATAGGAGCAATTAATTTTATTTCCACTATTTTAAATATACGTTCAGTTGGGATATCTATAGATAAGGTACCTTTATTTGTGTGATCTGTATTAGTTACTGCTGTTTTATTATTATTATCTTTACCAGTTTTAGCCTGGGGTATTACGATATTATTAACAGATCGAAATTTTAACACTTCTTTTTTTGACCCTGCGGGTGGAGGTGATCCAATTTTATTTCAACATCTTTTT
ADW61587/1-657_ADW61587 ACGTTATATTTAATATTTGGGGCTTGAGCTGCTATAGTAGGAACAGCCATAAGAGTATTAATTCGAATTGAATTAGGTCAACCTGGGAGGTTTATTGGGGATGATCAATTATATAATGTAATCGTTACTGCTCATGCATTTGTTATAATTTTTTTTATAGTAATACCTATTTTGATTGGAGGATTTGGAAATTGATTAGTTCCTTTAATATTAGGCGCTCCTGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGCTACTCCCTCCTTCATTATTTTTATTAATTATTTCTTCTATAGTAGAAATGGGAGTGGGGGCAGGATGGACGGTTTATCCTCCTTTAGCTAGTTTAGAGGGCCATGCTGGCAGGTCAGTGGATTTTGCTATTTTTTCTTTACATTTAGCGGGGGCCTCCTCTATTATGGGGGCTATTAATTTTATTTCTACTATTATTAATATACGATCGCATGGAATAACTATAGAAAAAGTACCTTTATTTGTATGATCAGTATTGATTACTGCTGTATTATTATTATTATCACTTCCAGTATTGGCGGGGGCTATCACAATATTATTAACTGATCGAAATTTTAATACTTCGTTTTTTGACCCTTCAGGAGGGGGGGATCCAATCCTTTTCCAACATTTATTT
AEE92862/1-657_AEE92862 ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAGTTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATGGTAACTGCTCATGCTTTAGTAATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGAGCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTGGTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTTGGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGGGCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTTGTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATATTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAGCATTTATTT
AEC60810/1-657_AEC60810 ACTTTGTATTTATTGTTTGGTATTTGATCTGCTATAATGGGAACGGCAATAAGAGTGATTATTCGAATTGAATTAGGTCAAGTTGGAAGATTGTTGGGTGATGATCATTTATATAATGTAATTGTAACAGCACATGCTTTGGTTATGATTTTTTTTATAGTTATACCGATTTTGATTGGTGGATTTGGAAATTGAATAGTTCCTTTGATGTTAGGTGCTCCAGATATAGCATTCCCACGTATAAATAATTTGAGATTTTGATTGCTTCCTCCATCATTATTTTTGTTATTATTATCTTCTTTAACAGATGTAGGGGTTGGAGCCGGGTGAACTATTTATCCTCCTTTATCCTCTGGGGTTGGACATAGAGGGGGGGGGATGGATTTTGCTATTTTTTCTTTACATTTAGCAGGAGCTTCATCTATTATAGGGGCGATTAATTTTATTACAACAATTATTAATATGCGAAGATTTGGAATAACAATAGAACGTGTACCTTTATTTGTGTGATCAGTTCTTATTACTACTATTTTATTATTGCTTTCTTTACCTGTATTGGCTGGTGCTATTACTATATTGTTGACTGATCGAAATTTCAATACTTCTTTTTTTGATCCTGCTGGAGGTGGTGATCCTATTTTGTTTCAACATTTATTT
AEE92861/1-633_AEE92861 ------------------------TGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAGTTGGGGCAAGTGGGAATATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTAATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGAGCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTGGTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTTGGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGGGCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTTGTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATATTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAACATTTATTT
AEE92860/1-648_AEE92860 ---------TTTGTTTTTGGAGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAGTTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTAATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGAGCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTGGTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTTGGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGGGCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTTGTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATATTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAACATTTATTT
ADD09384/1-555_ADD09384 ------------------------------------------------------------------------------------------------------TATCAGCTATACAATGTATTAATTACCGCTCATGCTATAATTATGGTATTTTTCATGATTATGCCAGCTTTATTTGGTGGATTTGGTAATTACTTTGTACCAATTTTAATAGGTGCCCCGGATATGGCTTTTCCTAGGCTAAATAATATAAGTTTTTGGCTACTTGTCCCTGCTTTTATATTATTAATGCTGTCAGGTTTGGTTGATGGAGGAGCTGGTACTGGCTGGACACTGTATCCTCCTCTAAGTAGTATAGTAGGGCATCCTGGCGCTGCTGTCGATATGGCTATTTTAAGCTTACATCTTACAGGGCTTTCCTCCATTCTTGGTTCAATTAATATGATTGTCACTATCTTTAATATGAGAACTGATGGTATGGGGTTATTTGAAATGCCCTTATTTGTTTGGTCAATTTTGGTTACTGCCTTCTTGCTGATACTAGCAATTCCTGTGTTAGGGGGTGCAATAACCATGTTACTGACTGATCGAAATTTTGGTACTACTTTTTTCAAGCCTGATGGTGGCGGAGATCCAGTGTTATTTCAGCATTTATTT
ADJ82639/1-645_ADJ82639 ACTTTATATTTAATGTTTGGGGTTTGGTCAGCTATAATAGGAACTGCTATAAGAGTATTAATTCGAATGGAATTAGGGAATCCTGGTAGATTGTTAGGTGATGATCATTTGTATAATGTTATAGTTACTGCTCATGCTTTTGTAATAATTTTTTTTATAGTAATGCCTATTCTTATTGGAGGTTTTGGAAATTGATTAGTTCCTTTAATATTAGGAGCTCCAGATATATCATTTCCTCGAATAAATAATCTTTCTTTTTGATTATTACCTCCTTCTTTATTTTTGTTATCTATATCTTCTATAGTAGAAATAGGAGTTGGGGCTGGGTGAACTGTTTATCCTCCTTTAGCGTCTACAGTTGGGCACATAGGAAATTCAATAGATTTTGCTATTTTTTCTCTTCATTTAGCTGGAGCTTCTTCTATTATAGGAGCTGTAAATTTTATTTCTACCATTATTAATATACGAATATTAGGAATATCTATAGAGAAGGTTCCTCTTTTTGTTTGATCAGTTTTAATTACAGCAGTATTATTATTACTTTCTTTACCTGTTTTAGCAGGTGCTATTACTATATTATTAACAGATCGAAATTTTAATACTTCTTTTTTTGATCCTGCTGGGGGAGGAGATCCTAATTTATTT------------
ADQ21240/1-648_ADQ21240 AGATTATATTTTGTTTTTGGGGCTTGAGCTGCTATAGTAGGAACAGCAATAAGAGTATTAATTCGTGTTGAGTTGGGACAAACTGGTAGTTTGTTAGGGGATGATCAGTTGTATAATGTTATTGTTACGGCTCATGCTTTTGTAATAATTTTTTTTATAGTTATGCCTATTTTAATTGGGGGTTTTGGAAATTGGCTGATTCCACTAATACTAGGAGCTCCGGATATAGCTTTCCCTCGTATAAATAATTTGAGATTTTGGCTTTTACCCCCTTCTTTATTATTACTGTTTATTTCAAGCATAGATGAGATAGGAGTGGGGGCGGGATGAACGGTTTACCCCCCTCTTGCCTCTTTAGAGGGACATTCTGGTAGTTCAGTAGATTTTGCTATTTTTTCTTTACACTTAGCTGGAGCGTCTTCTATTATAGGGGCTATTAATTTTATTTCCACAATTTTGAATATACGGGGTTATGGAATATCTATAGAAAAAGTACCTTTATTTGTTTGGTCCGTGTTAATTACAGCTGTATTATTATTGTTATCTCTTCCTGTGTTAGCTGGGGCTATCACAATATTACTGACGGATCGTAATTTTAATACTTCATTTTTTGATCCTTGTGGGGGGGGGGATCCTGTTTTGTTTCAA---------
AEE92882/1-657_AEE92882 ACGTTATATTTTGTTTTTGGAGCTTGATCTGCTATGGTAGGGACCGGAATAAGAGTAATTATTCGGTCTGAGTTGGGGCAAGTGGGGAGATTGTTGGGTGATGATCATATATATAATGTTATTGTAACTGCTCATGCTTTAGTAATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTACTGCCTTTAATAGTAGGAGCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCACCTTCTTTATTTTTGTTGGTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTTGGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGGGCGATTAATTTTATTACCACTATTATTAATATGCGTACAAATGGTATAACTATGGAGCGTGTGCCGTTGTTTGTGTGATCAGTATTAGTGACTGCTATTTTGTTATTATTGTCTTTACCAGTATTGGCGGGGGCTATTACGATATTACTAACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAGCATTTATTT
ADW58691/1-657_ADW58691 ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAATTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTTATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGTGCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTATTACCTCCTTCTTTATTTTTATTATTTATTTCTTCTATAGTTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTAGGTCATATGGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGAGCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTTGTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATATTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAACATTTATTT
ADW58631/1-657_ADW58631 ACTTTATATTTAATATTTGGAGCTTGATCTGCTATAGTAGGGACTGCTATAAGAGTGTTAATTCGAATAGAATTAGGTCAATCTGGAAGACTTTTAGGTGATGATCATTTATATAATGTTGTAGTTACTGCACATGCTTTTGTTATAATTTTTTTTATAGTTATACCTATTTTGATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAGGTGCTCCTGATATAGCTTTTCCTCGAATAAATAATTTAAGTTTTTGATTACTACCTCCTTCTTTATTTTTATTATTTATTTCTTCTATAGCTGAAATAGGAGTTGGAGCAGGATGAACAGTTTATCCTCCATTGGCATCTAGTGTAGGTCATATAGGAAGTGCAATAGATTTTGCTATTTTTTCATTACATTTGGCTGGTGCTTCTTCTATTATAGGAGCAGTAAATTTTATTACTACTATTATTAATATACGTTCTCATGGAATAAGAATAGAAAAAGTTCCTTTATTTGTTTGATCAGTTTTAATTACAGCTATTTTGTTGTTATTATCTTTACCTGTTTTAGCAGGTGCTATTACTATATTATTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCTGCTGGAGGAGGAGATCCTATTTTATTTCAACATTTATTT
ACM89220/1-657_ACM89220 ACTTTATATTTTTTATTTGGTACTTGATCAGCAATAATTGGTACAGCAATAAGTGTTTTAATTCGTGTTGAACTAGGATTTTCTGGAAGATTTTTAGGTGATGATCATTTATATAATGTAATTGTTACTGCTCATGCTTTTATTATAATTTTTTTTATAGTTATACCTATTTTAATTGGTGGTTTTGGAAATTGGTTAGTTCCTTTAATATTAAGAGCTCCAGATATAGCTTTTCCTCGTATAAATAATTTAAGATTTTGGTTACTACCTCCTTCGTTATTATTGTTATTTATTTCTTCTATGGTTGAAATCGGAGTTGGAGCAGGGTGGACTATTTATCCTCCTTTATCTTCTTCTGTGGGTCATTCTGGTGCATCTATGGATTTTGCAATTTTTTCTCTTCATTTAGCTGGTGCTTCTTCTATTATAGGTGCTATTAATTTTATTTCAACAATTATTAATATACGACCTTATGGTATAAGAATAGAAAAGATTCCTTTATTTGTATGATCTGTATTAATTACAGCTGTCTTATTATTATTATCATTACCAGTATTAGCTGGGGCTATTACTATACTTTTAACTGATCGTAATTTTAATACTTCTTTTTTTGATCCAGCTGGGGGTGGGGATCCAATTTTATTTCAGCATTTATTT
AEE92867/1-642_AEE92867 ---------------TTTGGGGCTTGATCTGCTATGGTAGGTACCGGAATAAGAGTAATTATTCGGTCTGAGTTGGGGCAAGTGGGAAGATTATTAGGTGATGATCATATATATAATGTTATGGTTACTGCTCATGCTTTAGTAATGATTTTTTTTATGGTAATGCCAATCATGATTGGAGGTTTTGGTAATTGATTATTGCCTTTAATGGTAGGAGCTCCTGATATGGCTTTTCCTCGTATAAATAATTTGAGTTTTTGATTGCTTCCTCCTTCTTTATTTTTGTTGGTGTTGTCTTCTTTAACAGATGTTGGGGTAGGGGCTGGTTGAACTATTTATCCTCCTTTGTCTTCGGGAGTTGGGCATGGAGGTGGGGGTATGGATTTTGCTATTTTTTCTTTGCATTTAGCTGGGGCTTCTTCTATTATGGGGGCGATTAATTTTATTACTACTATTATTAATATGCGTACAAATGGTATGACTATGGAGCGTGTGCCGTTGTTTGTGTGATCAGTATTAGTGACTGCTATTTTGTTATTGTTGTCTTTGCCAGTATTGGCGGGGGCTATTACAATATTATTGACAGATCGTAATTTTAATACATCTTTTTTTGATCCTGCTGGAGGAGGGGATCCTGTTCTGTTTCAACATTTATTT
ADH12119/1-645_ADH12119 ACTTTATACTTGGTTTTTGGTGCTTGAGCGGCTATGGTTGGAACTGCAATAAGTGTTTTAATTCGAATTGAGTTGGGGCAATCTGGTAGATTTATGGGAGATGATCAGTTGTATAATGTTATTGTAACTGCTCATGCTTTTGTTATAATTTTTTTTATGGTTATGCCTATTTTGATTGGGGGCTTTGGTAATTGACTGGTTCCTTTGATGTTGGGGGCTCCTGATATGGCTTTTCCTCGCATGAATAATTTAAGGTTTTGATTATTGCCTCCTTCTTTATTTTTATTATTTATTTCTTCTATGGTGGAAATAGGGGTTGGGGCTGGTTGAACGATCTACCCTCCTTTAGCGTCTCTAGAAGGACATTCAGGAAGTTCGGTTGATTTTGCCATTTTTTCTTTGCATTTGGCTGGGGCCTCTTCTATTATAGGGGCTATTAATTTTATTTCTACAATTTTGAATATACGGTCTTATGGGATGTCTATGGAAAAAGTTCCTTTGTTTGTTTGGTCGGTTTTAATTACTGCTGTTTTGCTCCTATTATCACTTCCGGTTTTAGCTGGGGCTATCACTATGTTATTAACTGATCGAAATTTTAATACATCGTTTTTTGATCCTTCGGGGGGAGGGGATCCTATTTTTTTT------------
;
end;
begin mrbayes;
set autoclose=yes;
charset Gene1_pos1 = 1-657\3;
charset Gene1_pos2 = 2-657\3;
charset Gene1_pos3 = 3-657\3;
charset p1 =Gene1_pos1;
charset p2 =Gene1_pos2;
charset p3 =Gene1_pos3;
partition current_partition =3:p1, p2, p3;
Lset applyto=(1) rates=invgamma nst=6;
Lset applyto=(2) rates=gamma nst=6;
Lset applyto=(3) rates=gamma nst=2;
link Brlens=(all);
unlink statefreq=(all);
unlink shape=(all);
link topology=(all);
end;
2013-02-05 15:57:07.212 UTC
Input file for MrBayes in nexus format both data and model using mbayes dialect
2013-02-05 15:56:42.208 UTC
branchModelChoice
Are the branch lengths across partition assumed to be equal in the model by the user?
2 possible value: "linked" or "unliked"
2013-02-05 15:58:18.340 UTC
"linked"
2013-02-05 15:58:27.687 UTC
Call_PartitionFinderName0Argument0Output_Path11Stadardouput22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeServiceNamevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
PartitionFinder
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUploadMSAfileFile_name0InputBody0REST_Service_redirection00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeUploadConfigFileFile_name0InputBody0REST_Service_redirection00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Loop
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring10string20output00net.sf.taverna.t2.activitieslocalworker-activity1.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity
string1
0
'text/plain'
java.lang.String
true
string2
0
'text/plain'
java.lang.String
true
output
0
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringConcat
UserNameHere
2013-01-30 10:36:22.209 UTC
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFile_name_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
partition_finder.cfg
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFile_name_value_1value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
test.phy
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeModelsetGUIGenePartition0BL11PartitionDef00Test22net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMrBayesParserBL0PartDef0PartFinder0MSAphy0nGen0nRun0MrBayesBlock00net.sf.taverna.t2.activitiesexternal-tool-activity1.4net.sf.taverna.t2.activities.externaltool.ExternalToolActivity
789663B8-DA91-428A-9F7D-B3F3DA185FD4
default local
<?xml version="1.0" encoding="UTF-8"?>
<localInvocation><shellPrefix>/bin/sh -c</shellPrefix><linkCommand>/bin/ln -s %%PATH_TO_ORIGINAL%% %%TARGET_NAME%%</linkCommand></localInvocation>
8736e2c3-d3eb-4fa2-957e-0f48330eab36
python PartitionParser.py PartDef PartFinder %%BL%% MSAphy %%nGen%% %%nRun%%
1200
1800
BL
nGen
nRun
PartitionParser.py
true
false
false
MacRoman
false
def phy2mrbayes(phy, DNA=True):
A=open(phy,"r").readlines()
ntaxa, nseq=A[0].split()
A=[x.split()[0].replace("/","_").replace("-","_")+" "+x.split()[1]+"\n" for x in A[1:]]
phylip="phylip format requires that first line includes only two integers"
assert int(ntaxa), phylip
assert int(nseq), phylip
assert DNA, "program assume sequence are nucleotides"
header= '#Nexus\n\nbegin data;\ndimensions ntax={ntaxa} nchar={nseq};\nformat datatype=dna interleave=no gap=- missing=? Matchchar=.;\nmatrix\n'.format(ntaxa=ntaxa,nseq=nseq)
footer=";\nend;\n"
return header+"".join(A)+footer
def PartitionFinder2MrBayes(PartDef, PartFinder, brlink, ngen, nrun ):
matrix={"JC":1, "F81":"1", "K80":"2", "HKY":"2", "SYM":"6", "GTR":"6"}
SS={"+I":"inv","+G":"gamma","+I+G":"invgamma"}
pi={"JC":"equal", "F81":"Dirichlet(1.0,1.0,1.0,1.0)", "K80":"equal", "HKY":"Dirichlet(1.0,1.0,1.0,1.0)", "SYM":"equal", "GTR":"Dirichlet(1.0,1.0,1.0,1.0)"}
footer="unlink statefreq=(all);\nunlink shape=(all);\nlink topology=(all);\nmcmcp ngen="+ngen+ " samplefreq=100 nchains=16 temp=0.200000 nruns="+nrun+";\nmcmc;\nquit;\nend;\n"
header="begin mrbayes;\nset autoclose=yes;\n\n"
Part=open(PartDef,"r").readlines()
Part=["charset "+i for i in Part]
flag=False
#Subsets={}
char=""
mod=""
for i in open(PartFinder,"r"):
line=i.split()
if len(line)==0: continue
#print(line)
if flag:
l=[j.strip() for j in i.split("|")]
if len(l)==1:
break
npartition=int(l[0])
Model=l[1]
M=matrix[Model[:Model.find("+")]]
ss=SS[Model[Model.find("+"):]]
#Subsets[line[0]]={model:line[1],sets:line[2]}
char+="charset p"+l[0]+" ="+l[2]+";\n"
mod+="Lset applyto=("+l[0]+") rates="+ss+" nst="+M+";\n"
elif line[0]=="Subset":
flag=True
BL="unlink Brlens=(all);\n"
if flag:
char+="partition current_partition ="+str(npartition)+":"+", ".join(["p"+str(i+1) for i in range(npartition)])+";\n"
char+="set partition = current_partition;\n"
if brlink=="linked":
BL="link Brlens=(all);\n"
return header+"".join(Part)+"\n"+char+mod+BL+footer
if "__main__"==__name__:
import sys
temp=PartitionFinder2MrBayes(sys.argv[1],sys.argv[2],sys.argv[3], sys.argv[5], sys.argv[6])
temp1=phy2mrbayes(sys.argv[4])
handle=open("MrBayesBlock","w")
handle.write(temp1)
handle.write(temp)
handle.close()
nGen
nGen
false
false
false
MacRoman
false
false
false
PartFinder
PartFinder
true
false
false
MacRoman
false
false
false
MSAphy
MSAphy
true
false
false
MacRoman
false
false
false
nRun
nRun
false
false
false
MacRoman
false
false
false
PartDef
PartDef
true
false
false
MacRoman
false
false
false
BL
BL
false
false
false
MacRoman
false
false
false
MrBayesBlock
MrBayesBlock
false
false
true
true
0
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokefasta2phyMSAfasta0MSAphy00net.sf.taverna.t2.activitiesexternal-tool-activity1.4net.sf.taverna.t2.activities.externaltool.ExternalToolActivity
789663B8-DA91-428A-9F7D-B3F3DA185FD4
default local
<?xml version="1.0" encoding="UTF-8"?>
<localInvocation><shellPrefix>/bin/sh -c</shellPrefix><linkCommand>/bin/ln -s %%PATH_TO_ORIGINAL%% %%TARGET_NAME%%</linkCommand></localInvocation>
c8c06e00-9f5a-464d-9e4e-9deb4eab8f4d
python Fasta2Phy.py MSAfasta
1200
1800
Fasta2Phy.py
true
false
false
MacRoman
false
def Fasta2Phy(MSAfasta):
msa=open(MSAfasta,"r").readlines()
msa="\n".join([i[:-1] for i in msa])
records=[(i[:i.find("\n")].replace(" ","_"),i[i.find("\n"):].replace("\n","").strip()) for i in msa.split(">")[1:]]
ntaxa=len(records)
nseq=len(records[0][1])
assert any([len(i[1])==nseq for i in records]), "all records should have same length"
body="\n".join([i[0]+" "+i[1] for i in records])
return " ".join(map(str,(ntaxa,nseq)))+"\n"+body+"\n"
if "__main__"==__name__:
import sys
out=Fasta2Phy(sys.argv[1])
handle=open("MSAphy","w")
handle.write(out)
handle.close()
MSAfasta
MSAfasta
true
false
false
MacRoman
false
false
false
MSAphy
MSAphy
false
false
true
true
0
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
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message
0
java.lang.String
true
title
0
java.lang.String
true
answer
0
0
ask
VelocityTemplate
false
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeask_NRunmessage0answer00net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
message
0
java.lang.String
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title
0
java.lang.String
true
answer
0
0
ask
VelocityTemplate
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemessage_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Number of Generation to be used in MCMCMC intergration with MrBayes [An integer i.e 100000]
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketitle_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity
Number of Generation
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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Number of independent Runs ( at least 2) [an integer]
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1
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCall_PartitionFinderNameCall_PartitionFinderArgumentUploadMSAfileFile_nameUploadMSAfileInputBodyUploadConfigFileFile_nameUploadConfigFileInputBodyConcatenate_two_stringsstring1Concatenate_two_stringsstring2ModelsetGUIGenePartitionMrBayesParserBLMrBayesParserPartDefMrBayesParserPartFinderMrBayesParserMSAphyMrBayesParsernGenMrBayesParsernRunfasta2phyMSAfastaask_NGenmessageask_NGentitleask_NRunmessagePathPartitionFinderOuputMrBayesInputbranchModelChoice
80768ac7-2051-474c-b6ca-84b3db44164e
2013-01-30 13:45:25.256 UTC
625baf1c-821f-44df-9ce4-63f172c0f7ee
2013-01-30 16:08:31.899 UTC
1d19ca77-9351-4595-ab58-24ab59ff26c0
2013-01-30 16:23:36.508 UTC
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2013-01-30 11:14:31.315 UTC
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2013-02-05 14:03:46.335 UTC
6d66ed79-a12a-4241-b18b-c498a7d2da07
2013-02-01 14:57:44.153 UTC
Selecting Evolutionary Model for a phylogenetic inference using partitionFinder program
2013-02-05 15:59:05.888 UTC
saverio vicario
giacinto donvito
2013-02-01 14:55:26.151 UTC
863e00c4-6cc6-4979-9acd-f720b98d7c86
2013-02-05 13:30:10.377 UTC
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2013-02-05 16:02:05.335 UTC
45591344-1d68-4777-aef1-e3dc645624b5
2013-02-05 10:43:14.770 UTC
Selecting Evolutionary Model for a phylogenetic inference using partitionFinder program. The program (http://www.robertlanfear.com/partitionfinder/) search best candidate model that satisfy need of the different partition. The program do not explore all possible model that could be implemented in mrbayes, in fact it do not allow for link of subsitution matrix but different base frequency across partitions, or to link branch lenght across some partitions but not all. For a greater fine tuning of model the user is advised to use the GUI interface present in the phylogenetic inference pipeline
2013-02-05 16:02:01.665 UTC
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2013-02-05 14:44:06.990 UTC
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2013-01-30 10:34:01.370 UTC
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2013-02-05 09:13:41.823 UTC
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2013-02-07 16:19:51.911 UTC
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2013-02-18 22:01:20.399 UTC
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2013-02-18 15:53:17.645 UTC
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2013-02-18 17:16:29.896 UTC
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2013-02-05 08:21:09.643 UTC
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2013-02-18 17:03:00.532 UTC
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2013-01-30 11:17:44.316 UTC
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2013-02-07 15:25:41.898 UTC
Workflow14Name00Argument00StatusOutput_PathStadardouputJobIDREST_Servicename0arguments0responseBody00net.sf.taverna.t2.activitiesrest-activity1.4net.sf.taverna.t2.activities.rest.RESTActivity
GET
http://alicegrid17.ba.infn.it:8080/INFN.Grid.FrontEnd/services/QueryJob/InsertJobs?NAME={name}&arguments={arguments}
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeXPath_Servicexml_text0nodelist11net.sf.taverna.t2.activitiesxpath-activity1.4net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Job><Name>blast</Name><Flag>7772590c-d7ab-4b76-98b9-aa293c6c34fe</Flag><JobsID><JobId>454118</JobId></JobsID></Job>
/Job/JobsID/JobId
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRetrivingJobJobID0Status00Output00StandardOutput11net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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<activity xmlns="http://taverna.sf.net/2008/xml/t2flow"><raven><group>net.sf.taverna.t2.activities</group><artifact>beanshell-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.beanshell.BeanshellActivity</class><inputMap /><outputMap /><configBean encoding="xstream"><net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean xmlns="">
<inputs>
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<classLoaderSharing>workflow</classLoaderSharing>
<localDependencies />
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<script>loop = "" + ! Status.equals("done");
if ("true".matches(loop)) {
Thread.sleep(2000);
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</net.sf.taverna.t2.activities.beanshell.BeanshellActivityConfigurationBean></configBean><annotations /></activity>
true
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDecodebase64tobyteBase640out00net.sf.taverna.t2.activitiesdataflow-activity1.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicenameREST_ServiceargumentsXPath_Servicexml_textRetrivingJobJobIDDecodebase64tobyteBase64StatusOutput_PathStadardouputJobID
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2012-04-02 15:51:30.599 UTC
4afab38a-1fec-43b4-8a32-83eaa59e8b8d
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2012-04-05 09:40:59.398 UTC
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2012-05-03 13:12:35.270 UTC
8a70d234-45be-42bd-8bff-039af9b1c962
2011-11-30 16:26:18.954 UTC
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2012-05-03 07:48:58.308 UTC
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2011-11-30 17:10:08.264 UTC
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2011-11-30 15:41:58.998 UTC
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2013-01-30 16:21:00.780 UTC
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2011-11-30 15:52:17.202 UTC
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2011-11-30 17:10:59.924 UTC
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2011-11-30 15:59:45.57 UTC
3c9f8d96-0c37-4a18-8214-289acc1482fb
2011-11-30 16:02:25.713 UTC
3b87511d-904e-4ec7-950d-2c9a6ea35734
2013-01-30 16:13:23.473 UTC
857db6d7-3775-4738-bf94-5c6a78c1fb8b
2011-11-30 16:00:08.58 UTC
c10777b3-6ac8-4d90-826e-bf0a7325e9ee
2012-04-02 15:49:23.545 UTC
9ea02975-9bbf-4aee-b585-ee92896d3d88
2012-05-03 15:25:26.968 UTC
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2011-11-30 15:54:01.684 UTC
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2011-11-30 16:07:49.591 UTC
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2012-04-30 16:08:07.938 UTC
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2013-01-30 16:18:54.540 UTC
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2011-11-30 17:00:56.590 UTC
10707355-ef1c-40d5-b452-6c9d0218e405
2012-04-05 09:28:04.523 UTC
Workflow1URL00OutputFullyInteractiondestination0net.sf.taverna.t2.activitiesinteraction-activity1.0.0net.sf.taverna.t2.activities.interaction.InteractionActivity
destination
0
text/plain
java.lang.String
false
http://www.mygrid.org.uk/taverna/internal/biovel/open_url.html
LocallyPresentedHtml
true
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1
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Dummy
net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
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net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInteractiondestinationOutputFully
e67a37fd-4c95-4b40-a88e-c4c1903f2f80
2012-05-04 20:12:04.919 UTC
11f188b9-1ba3-478c-a8af-73369e0b7750
2012-05-04 20:21:24.403 UTC
8ba75a8c-c9e1-4939-a604-f832383af079
2012-05-04 20:12:33.214 UTC
b584c1ec-b882-4136-a800-b3532cfab19b
2012-05-10 07:45:04.851 UTC
55542b17-acee-4db7-91d0-f98393aa66f3
2012-05-04 22:48:22.640 UTC