Workflow1Input_file00number_iterations00gold_standard00RFE_Remove_Percentage00RFE_Cost00RFE_Epsilon_Tolerance00ES_outDataSplit_And_Seedfile0number_iterations0out_folder0STDOUT00net.sf.taverna.t2.activitiesexternal-tool-activity1.4net.sf.taverna.t2.activities.externaltool.ExternalToolActivity 789663B8-DA91-428A-9F7D-B3F3DA185FD4 default local <?xml version="1.0" encoding="UTF-8"?> <localInvocation><shellPrefix>/bin/sh -c</shellPrefix><linkCommand>/bin/ln -s %%PATH_TO_ORIGINAL%% %%TARGET_NAME%%</linkCommand></localInvocation> fd227f0d-5dbb-422b-bb25-f01010f472ad java -jar /home/sholl/Desktop/RFE-Tests/IFR_new_August_2013/01_dataInputAndSplit.jar %%file%% %%out_folder%% %%number_iterations%% pwd ls -al 1200 1800 file number_iterations out_folder out_folder out_folder false false false UTF-8 false false false file file false false false UTF-8 false false false number_iterations number_iterations false false false UTF-8 false false false false true true 0 false net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtractSeeds_and_Inputin10seeds11file_path00net.sf.taverna.t2.activitiesbeanshell-activity1.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity in1 0 text/plain java.lang.String true seeds 1 1 file_path 0 0 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeRFESeed0Input0Remove_Percentage0Cost0Kernel_Type0Cache_Size0Kernel_coef00Kernel_Degree0Kernel_Gamma0propability0Shrink0SVM_nu0SVM_Type0Epsilon_Loss0Epsilon_Tolerance0RFEOutput00de.fzj.unicore.taverna.gridserviceunicore-activity0.0.4de.fzj.unicore.taverna.gridservice.activity.UnicoreAppActivity RFE https://fzj-unic.fz-juelich.de:9112/FZJ/services/Registry?res=default_registry 0.1 1 false true Input 0 java.io.File false false true Seed 0 java.lang.String false false true Remove_Percentage 0 java.lang.String false false true SVM_Type 0 java.lang.String false false true Cost 0 java.lang.String false false true Kernel_Type 0 java.lang.String false false true Kernel_Degree 0 java.lang.String false false true Kernel_Gamma 0 java.lang.String false false true Kernel_coef0 0 java.lang.String false false true SVM_nu 0 java.lang.String false false true Cache_Size 0 java.lang.String false false true Epsilon_Tolerance 0 java.lang.String false false true Epsilon_Loss 0 java.lang.String false false true Shrink 0 java.lang.String false false true propability 0 java.lang.String false false true RFEOutput RFEOutput.csv 0 java.io.File false false true stderr stderr 0 java.io.File false text/plain The standart output false true stdout stdout 0 java.io.File false text/plain The standart output false true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 200 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeout_folder_valuevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity . net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeKernel_Typevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCache_Sizevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 100 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeEpsilon_Lossvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0.1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeKernel_coef0value00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeKernel_Degreevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 3 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeKernel_Gammavalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0.25 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokepropabilityvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeShrinkvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSVM_nuvalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0.5 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSVM_Typevalue00net.sf.taverna.t2.activitiesstringconstant-activity1.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokecalc_ObjFunc_2Input_files1Gold_standard0SimpleES00de.fzj.unicore.taverna.gridserviceunicore-activity0.0.4de.fzj.unicore.taverna.gridservice.activity.UnicoreAppActivity clac_ObjFunc https://fzj-unic.fz-juelich.de:9112/FZJ/services/Registry?res=default_registry 0.1 1 false false Gold_standard GoldStandard.csv 0 java.io.File false false true Input_files 0 java.io.File false true true SimpleES SimpleES_1.csv 0 java.lang.String false false true stderr stderr 0 java.lang.String false text/plain The standart output false true stdout stdout 0 java.lang.String false text/plain The standart output false true net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeDataSplit_And_SeedfileInput_fileDataSplit_And_Seednumber_iterationsnumber_iterationsDataSplit_And_Seedout_folderout_folder_valuevalueExtractSeeds_and_Inputin1DataSplit_And_SeedSTDOUTRFESeedExtractSeeds_and_InputseedsRFEInputExtractSeeds_and_Inputfile_pathRFERemove_PercentageRFE_Remove_PercentageRFECostRFE_CostRFEKernel_TypeKernel_TypevalueRFECache_SizeCache_SizevalueRFEKernel_coef0Kernel_coef0valueRFEKernel_DegreeKernel_DegreevalueRFEKernel_GammaKernel_GammavalueRFEpropabilitypropabilityvalueRFEShrinkShrinkvalueRFESVM_nuSVM_nuvalueRFESVM_TypeSVM_TypevalueRFEEpsilon_LossEpsilon_LossvalueRFEEpsilon_ToleranceRFE_Epsilon_Tolerancecalc_ObjFunc_2Input_filesRFERFEOutputcalc_ObjFunc_2Gold_standardgold_standardES_outcalc_ObjFunc_2SimpleES 2900db4f-9d43-4d4a-9196-3e7baa2b2677 2013-03-26 08:23:53.591 UTC b125688d-a516-46a9-ac6c-1cdbdc9912ef 2013-04-29 12:56:29.891 UTC 1b267cba-6b00-4b03-92c5-d1b5957b1afc 2013-03-21 14:57:42.65 UTC b7083224-2ec9-4a09-9d80-a603e8fd5454 2013-04-02 07:37:29.341 UTC 250d333f-585c-44a9-b409-bd96e9797920 2013-04-29 15:10:18.900 UTC e1bef7cf-977b-4864-a7f1-754c593c66c5 2013-04-29 10:46:40.250 UTC f2e3daa0-dc10-4c1a-9c1f-fceb12b8d21b 2013-03-15 12:37:49.533 UTC f8498323-c7a9-415b-b699-e71f8f92283d 2013-03-21 14:31:45.475 UTC 79a9c774-dfcc-48e3-b9fc-c17ead7ab9d0 2013-08-12 07:15:19.912 UTC cf863ced-9351-4f22-831d-b9d7d159ca47 2013-03-20 13:39:07.664 UTC d6b0ed42-e90d-41bf-b161-f4cf34e727bb 2013-04-02 08:48:57.589 UTC 4118eee5-7517-43b2-a418-3585be6cbf02 2013-03-21 09:37:42.675 UTC fb62689b-e337-4e9a-a7f0-e8012bc91f28 2013-03-15 12:27:35.787 UTC f1b03fb4-2220-4a09-8c88-485de1a91aab 2013-04-29 14:47:54.806 UTC 832bb998-b7ad-46d7-9d2b-0bc80edda08f 2013-09-24 08:08:07.915 UTC 90e03c96-9afa-46f3-b597-78008aef222a 2013-03-21 14:18:51.26 UTC 363f2f3c-7506-4376-a0d0-bbe8610f0425 2013-03-14 17:16:03.119 UTC 1baad482-a1d7-4fbb-bb90-23d2b33d148a 2013-03-15 12:40:15.989 UTC 3d3c7f9e-78bd-455d-a2b6-1ddd049ac124 2013-03-21 14:20:34.352 UTC b5712a9b-6e59-479b-8d41-c00543457633 2013-04-02 07:55:46.917 UTC 64408b61-6461-4a79-a88f-e628c2ccd207 2013-03-22 07:57:41.103 UTC fa122329-9274-4dad-8063-757ce7b5c7f0 2013-09-09 15:13:17.154 UTC bc82325c-e77d-4d4f-be77-c8ea0abb6ceb 2013-03-26 08:08:49.275 UTC 531225db-5d37-4880-ae7a-d57728637ee3 2013-03-22 09:26:12.196 UTC 95f57ff5-8d0c-4397-b4cc-c4db71a13ca3 2013-03-21 14:26:03.481 UTC 84413ea6-1b09-43e6-8bae-c4cd3ae42599 2013-05-02 13:26:09.952 UTC 9d8cd170-b89f-4fec-8d7f-af9539f3b5a3 2013-03-21 14:27:00.432 UTC a17ffa23-01d3-473c-a3fe-b01f58fdd27f 2013-03-26 09:59:12.135 UTC 483554e7-cc3a-415c-bfb7-51f9b1b5425c 2013-03-14 17:10:47.913 UTC 0ac427f9-ea2e-4c3e-a09a-510d761fe26e 2013-03-26 10:24:37.715 UTC 3793f269-0b11-46dd-846c-a4d74afec9ea 2013-05-01 13:48:01.802 UTC b6b228a9-1d6e-4729-b3e2-aefa34952440 2013-03-22 08:01:19.217 UTC fe4a2fb0-846f-48bb-bee7-bab323f93397 2013-03-15 12:32:30.633 UTC c7f89a90-09db-42ad-862c-2d3c34e148f1 2013-04-26 10:17:25.567 UTC a0d49134-3637-4999-90f3-a184ee7c895a 2013-04-29 08:58:18.863 UTC 69aadb8b-bbc0-47c3-8ad1-f2d9feb1395b 2013-03-15 12:02:05.487 UTC eb380f0a-4267-4ad6-bb16-17380f577789 2013-04-26 10:20:06.310 UTC 59d238e9-f8ea-488c-a27f-471e5069e59d 2013-03-21 14:39:11.399 UTC 5a94cd56-a740-4588-9ff8-a59398fb7ccc 2013-03-21 15:28:12.526 UTC d971c21f-28ee-44a1-8f3a-328d3598ae65 2013-03-20 13:05:08.298 UTC 05158bd4-3c12-4b0d-a191-b0059202dfe5 2013-03-22 08:19:23.154 UTC 9fa88a6d-6377-4943-8a33-30aba6783639 2013-03-18 08:01:46.422 UTC 11461e68-a153-4eee-b374-29f2995bf037 2013-03-15 12:12:41.235 UTC c4019080-7f8c-4129-ae51-95539dd390b2 2013-03-15 12:29:00.390 UTC ebb224bb-6b72-4f3e-8f7b-9f46cd8646c2 2013-03-26 08:16:17.760 UTC baae2153-57bb-4a3a-b78f-375948ae8b00 2013-08-06 14:35:18.808 UTC 97e92d50-e0bf-4445-968d-4fabb063c4ee 2013-03-20 13:14:09.976 UTC 4ad4ea73-b794-4dd4-966e-0d662d5e93b0 2013-03-15 12:25:12.357 UTC ada8fb2c-4b90-4660-9dc2-8962a26a34ae 2013-03-15 12:07:33.836 UTC 954fbb45-0f7f-423d-b793-70e9864a5b3e 2013-03-26 09:37:47.991 UTC c52e94c2-71a8-46b0-9380-c2258bd6a534 2013-08-12 07:18:25.24 UTC 2d43bcb5-987f-482c-80f0-de96d90cf250 2013-04-26 10:35:25.82 UTC