Sample_points_environmentally_unique00
no
2014-03-19 13:57:27.800 UTC
Filter environmentally unique points, i.e. discard coordinates with the same environmental conditions ("yes" or "no").
2014-11-18 13:55:34.664 UTC
spatially_unique00
no
2014-03-19 13:57:45.475 UTC
Filter spatially unique points, i.e. discard duplicate coordinates ("yes" or "no").
2014-11-18 13:55:16.568 UTC
layers_ids00
/layers/en/marine/global/incofish/HCAFv4/present/30arc-minutes/178ec510-04c0-11e1-be50-0800200c9a66
/layers/en/marine/global/incofish/HCAFv4/present/30arc-minutes/4be275f0-04c0-11e1-be50-0800200c9a66
2014-03-19 13:59:06.205 UTC
Newline separated list of layers defining the environment for point sampling.
2014-03-19 13:58:49.700 UTC
mask_id00
/layers/en/marine/global/incofish/HCAFv4/present/30arc-minutes/178ec510-04c0-11e1-be50-0800200c9a66
2014-03-19 13:59:53.223 UTC
Mask id used for sampling points.
2014-11-17 18:44:53.966 UTC
num_points00
100
2014-03-19 14:01:05.872 UTC
Number of points to be sampled.
2014-03-19 14:01:02.565 UTC
species_label00
Species name to be returned for all points.
2014-11-17 18:44:39.814 UTC
Gammarus tigrinus
2014-03-19 14:01:39.631 UTC
proportion_of_absences00
1.0
2014-03-19 14:03:06.632 UTC
Proportion of absence points to be sampled (value between 0 and 1).
2014-11-17 18:44:22.953 UTC
return_environmental_data00
no
2014-12-09 17:07:30.517 UTC
Indicate if the returned points should include environmental data ("yes" or "no"). Important: if the same points are going to be used in subsequent operations with a different environmental scenario, DO NOT include environmental data here.
2014-12-09 17:10:12.755 UTC
log0
Sample points log.
2014-03-19 14:26:23.714 UTC
progress0
Sample points progress. Possible values are: 100 (finished), -2 (aborted) or -3 (cancelled).
2014-03-19 14:26:59.470 UTC
presence_points_xml0
XML with sampled presence points.
2014-03-19 14:27:55.817 UTC
<Point Id="1" Sample="37.27 23.38" X="-32.0247926" Y="26.7977471"/>
<Point Id="2" Sample="34.99 24.05" X="90.8528048" Y="-20.7486283"/>
<Point Id="3" Sample="35.17 24.68" X="54.6770685" Y="-24.3450266"/>
<Point Id="4" Sample="34.79 27.29" X="145.893467" Y="-10.9186684"/>
<Point Id="5" Sample="35.01 21.98" X="176.975859" Y="30.1929178"/>
<Point Id="6" Sample="35.25 14.10" X="144.369479" Y="-41.0856932"/>
<Point Id="7" Sample="36.54 22.55" X="-6.28578767" Y="-16.5377245"/>
<Point Id="8" Sample="33.43 25.95" X="10.4316681" Y="-7.85445968"/>
<Point Id="9" Sample="33.90 20.35" X="-116.755261" Y="25.4309333"/>
<Point Id="10" Sample="28.98 -1.79" X="165.618031" Y="77.048772"/>
2014-12-04 12:07:05.181 UTC
absence_points_xml0
XML with sampled absence points.
2014-03-19 14:28:03.274 UTC
ticket0
abc123
2014-12-09 17:27:42.26 UTC
Ticket returned by the service. This will only be useful if you need to contact the service administrator to report an issue about this operation.
2014-12-09 17:27:37.745 UTC
make_xmlmask_id0layers0species_label0num_points0spatially_unique0environmentally_unique0proportion_of_absences0xml00net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity
environmentally_unique
0
text/plain
java.lang.String
true
mask_id
0
text/plain
java.lang.String
true
layers
0
text/plain
java.lang.String
true
spatially_unique
0
text/plain
java.lang.String
true
proportion_of_absences
0
text/plain
java.lang.String
true
num_points
0
text/plain
java.lang.String
true
species_label
0
text/plain
java.lang.String
true
xml
0
0
workflow
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokecall_servicesamplePoints_configuration0output_log00output_progress00presence_points_xml00absence_points_xml00ticket00
This part is responsible for calling the service and fetching results.
2014-03-19 14:12:49.452 UTC
net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeclean_xmlreturn_environmental_data0presence_points_xml0absence_points_xml0cleaned_presence_points_xml00cleaned_absence_points_xml00net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity
return_environmental_data
0
text/plain
java.lang.String
true
presence_points_xml
0
text/plain
java.lang.String
true
absence_points_xml
0
text/plain
java.lang.String
true
cleaned_presence_points_xml
0
0
cleaned_absence_points_xml
0
0
workflow
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokemake_xmlmask_idmake_xmllayersmake_xmlspecies_labelmake_xmlnum_pointsmake_xmlspatially_uniquemake_xmlenvironmentally_uniquemake_xmlproportion_of_absencescall_servicesamplePoints_configurationclean_xmlreturn_environmental_dataclean_xmlpresence_points_xmlclean_xmlabsence_points_xmllogprogresspresence_points_xmlabsence_points_xmlticket
8782870d-2d60-438c-a077-c32d570b4a19
2014-03-19 14:25:40.627 UTC
61da1b94-c5d7-4999-a0e1-2d237acd2359
2014-11-05 19:07:46.528 UTC
1b9e6dc9-3a85-46db-917c-5dc215d9dd24
2014-03-19 14:26:25.337 UTC
5e9880df-392b-4ce2-8596-147657e7cc2d
2014-03-19 16:51:55.879 UTC
Alan R Williams & Renato De Giovanni
2014-03-19 14:51:45.194 UTC
Randomly sample a specified number of absence and/or presence points in a given environment.
2014-03-19 14:52:16.207 UTC
4177c02a-3e10-4b7d-8eb5-0e68a3660085
2014-11-18 13:55:56.554 UTC
f042d666-7636-475c-a753-31b39921adef
2014-03-19 14:55:53.504 UTC
a2791748-a4a8-4042-bac1-eeeced72bb43
2014-12-04 12:22:56.799 UTC
ac77a8fa-cf3d-45cf-8aa9-7b77e678d1ea
2014-03-19 16:34:21.459 UTC
cb7910c6-b117-4c76-ace0-37552be4dffe
2014-03-19 14:13:21.354 UTC
527129f7-f393-4b32-baf4-1e95040157bb
2014-03-19 14:52:26.19 UTC
c966c219-e9ee-433f-af30-2fcd4977454d
2014-03-19 16:33:34.412 UTC
c8e057bb-dcfa-4b8f-8b72-da3e4c03b55f
2014-11-04 18:56:07.463 UTC
03ed681d-6837-4e1c-84d9-852f273175da
2014-03-19 14:28:05.208 UTC
0876f66f-bfa7-4610-9fa3-c074662f19dd
2014-11-04 17:45:22.443 UTC
6fb6c846-6501-4b1b-9ca7-c97b9fb1a98d
2014-03-19 16:48:56.344 UTC
54310825-8d87-4843-97c8-f40222b0b433
2014-11-17 18:46:37.509 UTC
Sample points.
2014-03-19 14:52:24.288 UTC
34bea0a7-eda2-4ea0-b390-017817415005
2014-12-09 17:28:08.571 UTC
c283319a-f1c2-4456-b914-0ffb2d0d2a11
2014-03-19 16:36:32.57 UTC
b16d4447-cae6-4aa5-8df8-1a8c89f1328c
2014-03-19 14:31:03.82 UTC
65575a6f-1424-4d86-ac2f-870914dc9c9a
2014-03-19 16:47:58.202 UTC
a61c6357-07cb-42a9-8aec-75477a8bcb0a
2014-03-19 16:53:44.457 UTC
Test_modelsamplePoints_configuration00
XML configuration used to sample points.
2014-03-19 14:11:47.848 UTC
output_progress0
The progress in creating the model. This should be -2 (failure) or 100 (success) for the looping to have finished.
2011-11-24 18:43:17.964 UTC
output_log0
The log of the model testing. This is output for information.
2011-11-24 18:42:16.371 UTC
presence_points_xml0
XML string with sampled presence points.
2014-03-19 14:24:19.30 UTC
absence_points_xml0
XML string with sampled absence points.
2014-03-19 14:24:10.715 UTC
ticket0
abc123
2014-12-09 17:25:02.723 UTC
Ticket returned by the service. This will only be useful if you need to contact the service administrator to report an issue about this operation.
2014-12-09 17:26:06.395 UTC
getLog_inputticket0output00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLInputSplitterActivity
ticket
0
'text/plain'
false
output
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getLog" name="Body" qname="{http://openmodeller.cria.org.br/ws/2.0}getLog"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="ticket" qname=">getLog>ticket" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetLog_outputinput0log00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
log
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getLogResponse" name="Body" qname="{http://openmodeller.cria.org.br/ws/2.0}getLogResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="log" qname=">getLogResponse>log" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetLogBody0Body00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://modeller.cria.org.br/ws2/om?wsdl
getLog
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
3
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokecheckProgressinput_progress0output_progress00net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity
input_progress
0
text/plain
java.lang.String
true
output_progress
0
0
workflow
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesamplePointsBody0Body00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://modeller.cria.org.br/ws2/om?wsdl
samplePoints
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokesamplePoints_Bodyinput0ticket00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
ticket
0
'text/plain'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="samplePointsResponse" name="Body" qname="{http://openmodeller.cria.org.br/ws/2.0}samplePointsResponse"><s:elements><s:basetype optional="false" unbounded="false" typename="string" name="ticket" qname=">samplePointsResponse>ticket" /></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSamplingResultBody0Body00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.WSDLActivity
http://modeller.cria.org.br/ws2/om?wsdl
getSamplingResult
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetSamplingResult_Bodyinput0Sampler00net.sf.taverna.t2.activitieswsdl-activity1.5net.sf.taverna.t2.activities.wsdl.xmlsplitter.XMLOutputSplitterActivity
input
0
'text/xml'
java.lang.String
false
Sampler
0
'text/xml'
0
<s:extensions xmlns:s="http://org.embl.ebi.escience/xscufl/0.1alpha"><s:complextype optional="false" unbounded="false" typename="getSamplingResultResponse" name="Body" qname="{http://openmodeller.cria.org.br/ws/2.0}getSamplingResultResponse"><s:elements><s:complextype optional="true" unbounded="false" typename="Sampler" name="Sampler" qname="{http://openmodeller.cria.org.br/xml/2.0}>getSamplingResultResponse>Sampler"><s:elements><s:complextype optional="false" unbounded="false" typename="EnvironmentType" name="Environment" qname="{http://openmodeller.cria.org.br/xml/2.0}SamplerType>Environment"><s:elements><s:arraytype optional="false" unbounded="true" wrapped="false" typename="ModellingLayerType" name="Map" qname="{http://openmodeller.cria.org.br/xml/2.0}EnvironmentType>Map"><s:elementtype><s:complextype optional="false" unbounded="false" typename="ModellingLayerType" name="" qname="{http://openmodeller.cria.org.br/xml/2.0}ModellingLayerType"><s:elements /><s:attributes><s:attribute optional="false" unbounded="false" typename="BasicLayerType>Id" name="Id" qname="BasicLayerType>Id" /><s:attribute optional="false" unbounded="false" typename="ModellingLayerType>IsCategorical" name="IsCategorical" qname="ModellingLayerType>IsCategorical" /><s:attribute optional="false" unbounded="false" typename="ModellingLayerType>Min" name="Min" qname="ModellingLayerType>Min" /><s:attribute optional="false" unbounded="false" typename="ModellingLayerType>Max" name="Max" qname="ModellingLayerType>Max" /></s:attributes></s:complextype></s:elementtype></s:arraytype><s:complextype optional="false" unbounded="false" typename="BasicLayerType" name="Mask" qname="{http://openmodeller.cria.org.br/xml/2.0}EnvironmentType>Mask"><s:elements /></s:complextype></s:elements><s:attributes><s:attribute optional="false" unbounded="false" typename="EnvironmentType>NumLayers" name="NumLayers" qname="EnvironmentType>NumLayers" /></s:attributes></s:complextype><s:complextype optional="false" unbounded="false" typename="OccurrencesType" name="Presence" qname="{http://openmodeller.cria.org.br/xml/2.0}SamplerType>Presence"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="CoordinateSystem" qname="{http://openmodeller.cria.org.br/xml/2.0}OccurrencesType>CoordinateSystem" /><s:arraytype optional="false" unbounded="true" wrapped="false" typename=">OccurrencesType>Point" name="Point" qname="{http://openmodeller.cria.org.br/xml/2.0}OccurrencesType>Point"><s:elementtype><s:complextype optional="false" unbounded="false" typename=">OccurrencesType>Point" name="" qname="{http://openmodeller.cria.org.br/xml/2.0}>OccurrencesType>Point"><s:elements /><s:attributes><s:attribute optional="false" unbounded="false" typename=">OccurrencesType>Point>Id" name="Id" qname=">OccurrencesType>Point>Id" /><s:attribute optional="false" unbounded="false" typename=">OccurrencesType>Point>X" name="X" qname=">OccurrencesType>Point>X" /><s:attribute optional="false" unbounded="false" typename=">OccurrencesType>Point>Y" name="Y" qname=">OccurrencesType>Point>Y" /><s:attribute optional="false" unbounded="false" typename=">OccurrencesType>Point>Sample" name="Sample" qname=">OccurrencesType>Point>Sample" /></s:attributes></s:complextype></s:elementtype></s:arraytype></s:elements><s:attributes><s:attribute optional="false" unbounded="false" typename="OccurrencesType>Count" name="Count" qname="OccurrencesType>Count" /><s:attribute optional="false" unbounded="false" typename="OccurrencesType>Label" name="Label" qname="OccurrencesType>Label" /></s:attributes></s:complextype><s:complextype optional="true" unbounded="false" typename="OccurrencesType" name="Absence" qname="{http://openmodeller.cria.org.br/xml/2.0}SamplerType>Absence"><s:elements><s:basetype optional="true" unbounded="false" typename="string" name="CoordinateSystem" qname="{http://openmodeller.cria.org.br/xml/2.0}OccurrencesType>CoordinateSystem" /><s:arraytype id="{http://openmodeller.cria.org.br/xml/2.0}OccurrencesType>Point" optional="false" unbounded="true" wrapped="false" typename=">OccurrencesType>Point" name="Point" /></s:elements></s:complextype><s:complextype id="{http://openmodeller.cria.org.br/xml/2.0}SamplerType>Absence" optional="true" unbounded="false" typename="OccurrencesType" name="Absence" /></s:elements></s:complextype></s:elements></s:complextype></s:extensions>
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeextract_presence_pointsxml_text0nodelistAsXML11net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Sampler xmlns="http://openmodeller.cria.org.br/xml/2.0">
<Environment NumLayers="2">
<Map Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/14aecd40-04d9-11e1-be50-0800200c9a66" IsCategorical="0" Min="-281" Max="310"/>
<Map Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/bf441530-04d9-11e1-be50-0800200c9a66" IsCategorical="0" Min="9" Max="211"/>
<Mask Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/14aecd40-04d9-11e1-be50-0800200c9a66"/>
</Environment>
<Presence Label="Test species" Count="5">
<CoordinateSystem>GEOGCS['1924 ellipsoid',DATUM['Not_specified',SPHEROID['International 1924',6378388,297,
AUTHORITY['EPSG','7022']],AUTHORITY['EPSG','6022']],PRIMEM['Greenwich',0,AUTHORITY['EPSG','8901']],UNIT['degree',
0.0174532925199433,AUTHORITY['EPSG','9108']],AUTHORITY['EPSG','4022']]</CoordinateSystem>
<Point Id="1" X="-68.85" Y="-11.15" Sample="250 107"/>
<Point Id="2" X="-67.38" Y="-14.32" Sample="260 114"/>
<Point Id="3" X="-67.15" Y="-15.52" Sample="225 112"/>
<Point Id="4" X="-65.12" Y="-16.73" Sample="254 112"/>
<Point Id="5" X="-63.17" Y="-17.80" Sample="241 103"/>
</Presence>
</Sampler>
/default:Sampler/default:Presence/default:Point
default
http://openmodeller.cria.org.br/xml/2.0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_2stringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeextract_absence_pointsxml_text0nodelistAsXML11net.sf.taverna.t2.activitiesxpath-activity1.5net.sf.taverna.t2.activities.xpath.XPathActivity
<?xml version="1.0" encoding="UTF-8"?>
<Sampler xmlns="http://openmodeller.cria.org.br/xml/2.0">
<Environment NumLayers="2">
<Map Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/14aecd40-04d9-11e1-be50-0800200c9a66" IsCategorical="0" Min="-281" Max="310"/>
<Map Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/bf441530-04d9-11e1-be50-0800200c9a66" IsCategorical="0" Min="9" Max="211"/>
<Mask Id="/layers/en/terrestrial/climate/global/worldclim/present/bioclim/10arc-minutes/14aecd40-04d9-11e1-be50-0800200c9a66"/>
</Environment>
<Absence Label="Test species" Count="5">
<CoordinateSystem>GEOGCS['1924 ellipsoid',DATUM['Not_specified',SPHEROID['International 1924',6378388,297,
AUTHORITY['EPSG','7022']],AUTHORITY['EPSG','6022']],PRIMEM['Greenwich',0,AUTHORITY['EPSG','8901']],UNIT['degree',
0.0174532925199433,AUTHORITY['EPSG','9108']],AUTHORITY['EPSG','4022']]</CoordinateSystem>
<Point Id="1" X="-68.85" Y="-11.15" Sample="250 107"/>
<Point Id="2" X="-67.38" Y="-14.32" Sample="260 114"/>
<Point Id="3" X="-67.15" Y="-15.52" Sample="225 112"/>
<Point Id="4" X="-65.12" Y="-16.73" Sample="254 112"/>
<Point Id="5" X="-63.17" Y="-17.80" Sample="241 103"/>
</Absence>
</Sampler>
/default:Sampler/default:Absence/default:Point
default
http://openmodeller.cria.org.br/xml/2.0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeMerge_String_List_to_a_String_1stringlist1concatenated00net.sf.taverna.t2.activitieslocalworker-activity1.5net.sf.taverna.t2.activities.localworker.LocalworkerActivity
stringlist
1
l('text/plain')
java.lang.String
true
seperator
0
'text/plain'
java.lang.String
true
concatenated
0
'text/plain'
0
workflow
org.embl.ebi.escience.scuflworkers.java.StringListMerge
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeloop_until_progress_completeinput_ticket0output_progress00net.sf.taverna.t2.componentcomponent-activity1.5net.sf.taverna.t2.component.ComponentActivity
http://www.myexperiment.org
ENM components
loop_until_progress_complete
4
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize
1
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry
1.0
1000
5000
0
net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokegetLog_inputticketgetLog_outputinputgetLogBodycheckProgressinput_progresssamplePointsBodysamplePoints_BodyinputgetSamplingResultBodygetSamplingResult_Bodyinputextract_presence_pointsxml_textMerge_String_List_to_a_String_2stringlistextract_absence_pointsxml_textMerge_String_List_to_a_String_1stringlistloop_until_progress_completeinput_ticketoutput_progressoutput_logpresence_points_xmlabsence_points_xmlticket
927b766a-6a1b-4675-a134-323d810d9aa3
2014-12-09 17:26:34.690 UTC
dd07a5e8-16a1-4e18-8ee4-8fdda79d2379
2014-03-19 16:47:48.608 UTC
55f3fbd4-c7a3-461d-a419-356e3571f993
2014-03-19 14:17:57.859 UTC
96583700-ed98-4cd2-a9c9-f05b9b611c41
2013-10-04 07:48:11.98 UTC
92ddda76-d9d3-432d-89c1-14299c1cc81f
2011-11-22 18:10:23.70 UTC
e72ddcf7-8ffb-413b-9039-e0b5ce3cc011
2011-11-01 12:17:19.381 UTC
1e59a407-40a2-4a7b-a03a-32bb974ea9db
2013-10-03 15:32:05.910 UTC
4da4102f-8671-42d1-ae5e-4242853ccd68
2011-11-01 17:20:19.589 UTC
44324d23-56ba-462c-9983-8d5181018a60
2014-03-19 14:12:05.320 UTC
Test model
2011-11-24 18:38:13.898 UTC
1cc516b7-1e91-449f-ba3a-0c1b441f44af
2013-05-15 17:13:47.275 UTC
caca1aad-a78c-42d1-8dd1-f4c9d7f2fe87
2014-03-19 16:48:46.212 UTC
5113aef3-ad85-46cf-9cce-5c1177f089bc
2014-03-19 16:34:15.781 UTC
e9de109a-5135-4c3c-839d-dcf82bc3fa30
2011-11-01 16:04:23.263 UTC
e85c7a89-677e-4ef3-a0e8-9d7582a923e2
2012-12-21 17:14:43.643 UTC
f39d661b-5ad6-47e2-963c-1c9019c2ac62
2014-03-19 16:51:42.697 UTC
7560f897-6e7a-400c-b0c9-ae499f82e75e
2014-03-19 14:24:56.339 UTC
29f37aee-a378-48a7-b93a-5ff8a905ad56
2011-11-01 12:57:39.12 UTC
81f8e562-7c82-43f3-b930-d5e03b8eaf41
2011-11-01 13:37:04.176 UTC
b7cfbe7f-e001-4ad7-b717-bc76ee9b57fd
2013-10-03 18:19:22.464 UTC
d2e85856-ff10-44f7-81fe-39e7b8cc8f93
2011-11-24 18:57:32.279 UTC
This workflow uses openModeller to test a model using the specified configuration.
2012-12-21 17:14:42.239 UTC
8bee7949-a15c-4580-89b1-cb93766a45ca
2011-11-01 17:23:20.128 UTC
15ee13a5-7fe5-42b2-af5c-39362d3fabb8
2013-10-03 15:31:05.76 UTC
df90423c-27c5-43a9-87fe-1274eede8691
2011-11-22 17:34:54.535 UTC
d96bdc79-0b84-4acf-8640-a0d121389834
2011-11-04 13:44:11.745 UTC
d71b64e2-85a6-422b-bd9b-c4e3ce3b8e2a
2013-10-03 15:38:18.369 UTC
db008ac5-5b51-4267-b62e-7e3c42d02a3f
2014-02-13 09:46:46.98 UTC
ef14550e-5393-4f1e-9ce5-00e8a3cd9b17
2014-03-19 14:55:46.327 UTC
355cef2e-25d4-4536-ae04-ee179ea5ba69
2011-11-01 12:50:16.51 UTC
b81c6344-16f9-407e-85be-e5729bbe84f9
2014-03-19 16:33:00.716 UTC
921f4e44-468f-4e2e-a0d1-bb2c1fdb373d
2014-11-04 17:44:54.283 UTC
f01d2d16-3d8a-48a2-a7b6-1ffc64c600fe
2014-03-19 16:36:25.271 UTC
a183ec01-d587-437e-b1d2-aa65ff9a3ccf
2013-12-10 17:37:35.206 UTC
b5972b2a-dd73-4e14-9e66-bf5e29f814e3
2011-11-01 14:58:36.479 UTC
2f2e5421-321a-4b08-a3e0-6052682bb58c
2013-12-10 17:52:36.677 UTC
ae625384-46da-4dfd-a1df-517620e11043
2013-10-09 16:35:11.528 UTC
Alan R Williams
2011-11-24 18:38:18.474 UTC
1fd43924-92a7-463f-a883-72ead95d64ba
2011-11-01 13:42:22.377 UTC
73913773-e684-4aa6-9beb-ff6adc8f30ee
2011-11-01 12:34:44.825 UTC
434c5ba5-d38c-4547-8a1d-ce0165aecfa9
2014-11-04 18:55:46.596 UTC
677ba6d4-bf6c-4662-9e5f-9e78df98f55f
2011-11-01 13:41:25.944 UTC
6499f3c4-752b-4a0c-8d5f-58e243657e79
2011-11-24 18:44:13.748 UTC
232c02df-7eca-469d-80bb-6b500c216742
2014-03-19 14:50:27.254 UTC
78eb0e64-0b62-4d9f-9615-0ab55248c180
2011-11-01 13:32:31.796 UTC