Metabolite_pathway_skeywords00 The keywords to search for in the KEGG pathway database 2014-12-18 12:38:43.784 UTC Fatty acid 2014-12-12 11:25:02.254 UTC pathway_id0 The id of the chosen pathway 2014-12-18 12:39:45.413 UTC pathway_image0 A PNG containing the image of the chosen pathway 2014-12-18 12:39:07.318 UTC pathway_description0 A description of the chosen pathway 2014-12-18 12:39:28.399 UTC compound_ids1 The KEGG ids of the compounds in the chosen pathway 2014-12-18 12:40:12.13 UTC compound_info1 Information about the compounds in the chosen pathway 2014-12-18 12:40:30.801 UTC Search_for_pathwaykeywords0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://rest.kegg.jp/find/pathway/{keywords} application/xml application/xml String false false false false true keywords java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFetch_pathway_imageid0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://rest.kegg.jp/get/{id}/image image/png application/xml String false false false false true id java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFetch_pathway_descriptionid0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://rest.kegg.jp/get/{id} text/plain application/xml String false false false false true id java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFetch_compoundsid0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://rest.kegg.jp/link/compound/{id} application/xml application/xml String false false false false true id java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFetch_compound_descriptionid0responseBody00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://rest.kegg.jp/get/{id} application/xml application/xml String false false false false true id java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 100 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeChoose_idids1names1answer_id00net.sf.taverna.t2.componentcomponent-activity1.5net.sf.taverna.t2.component.ComponentActivity http://www.myexperiment.org Test components Choose_id 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtract_pathway_datakegg_info0first11second11net.sf.taverna.t2.componentcomponent-activity1.5net.sf.taverna.t2.component.ComponentActivity http://www.myexperiment.org Test components Extract columns 3 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeExtract_compound_datakegg_info0second11net.sf.taverna.t2.componentcomponent-activity1.5net.sf.taverna.t2.component.ComponentActivity http://www.myexperiment.org Test components Extract columns 3 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSearch_for_pathwaykeywordskeywordsFetch_pathway_imageidChoose_idanswer_idFetch_pathway_descriptionidChoose_idanswer_idFetch_compoundsidChoose_idanswer_idFetch_compound_descriptionidExtract_compound_datasecondChoose_ididsExtract_pathway_datafirstChoose_idnamesExtract_pathway_datasecondExtract_pathway_datakegg_infoSearch_for_pathwayresponseBodyExtract_compound_datakegg_infoFetch_compoundsresponseBodypathway_idChoose_idanswer_idpathway_imageFetch_pathway_imageresponseBodypathway_descriptionFetch_pathway_descriptionresponseBodycompound_idsExtract_compound_datasecondcompound_infoFetch_compound_descriptionresponseBody 71f57d87-85b8-49ce-b765-868e08dbd2f6 2014-12-18 13:15:10.693 UTC 926f4b71-5160-46f4-aaef-03d61a199a65 2014-12-12 11:05:07.330 UTC d1ec733a-54fc-4252-9b20-19fe2924aa38 2014-12-12 10:52:30.766 UTC 78e01143-afb8-4429-9946-c9b4338207be 2014-12-12 10:50:33.115 UTC e9e74bf9-7795-4aeb-afe6-b8dc98c2636e 2014-12-18 13:31:03.349 UTC d6795e10-f02a-4acc-ab26-236ff1d5939b 2014-12-12 11:31:54.35 UTC 2e633927-5e87-46a9-a3a4-91d3df4eb707 2014-12-18 13:12:26.282 UTC abe720e6-8b25-48c0-914e-ed6628e14ee8 2014-12-18 11:42:10.261 UTC ac538d2b-1c6a-4126-ac39-1474d306907f 2014-12-12 12:16:36.765 UTC 43e5ad19-ecd6-45f6-8cb7-76336235ec41 2014-12-18 11:55:24.197 UTC 7f499d76-e5a6-47d4-a797-185524eb61cc 2014-12-12 11:12:42.897 UTC 929fc342-fbc9-42be-b5ee-d3717f583c99 2014-12-12 10:54:24.627 UTC c87786f7-a9a2-426d-bf8f-96ac118ddc36 2014-12-12 11:25:15.499 UTC 972c900e-30cb-4989-8cfa-b9d76354a70f 2014-12-12 11:02:36.404 UTC 4c33aa52-0d6c-4569-9081-650b398649a0 2014-12-18 12:00:58.518 UTC 8ef3b0b2-4e46-41e4-a79c-65e55b3ca9ca 2014-12-18 11:48:49.889 UTC 6c2e27c9-6693-444f-8b7a-5d7663f0b062 2014-12-18 11:47:15.110 UTC 35a601ba-cb74-4c7c-b30c-8b23e3314867 2014-12-12 11:16:12.263 UTC 082cfbde-57f4-4149-9ecb-95f528aedc1f 2014-12-12 10:43:57.971 UTC af328b7e-2e0a-4cf4-96b3-a0e44dedbdfe 2014-12-18 13:24:16.502 UTC 18c81f25-3f95-4247-93e9-61132865a2ce 2014-12-12 11:15:03.336 UTC 16285bab-0893-4ac2-9730-46121a5a8bef 2014-12-18 13:22:01.922 UTC 3e682e96-3a77-4082-9f57-dfbbd7ad09b3 2014-12-12 11:09:45.366 UTC The workflow searches for metabolomic pathways that match the entered keywords and returns information about the chosen pathway 2014-12-12 12:28:08.221 UTC Alan R Williams 2014-12-12 12:28:16.435 UTC Metabolite pathway search 2014-12-12 12:27:29.612 UTC 83da7550-1c6c-4f2c-bf50-29c084adc70b 2014-12-12 10:45:00.17 UTC 9fb1d827-b6f4-44e9-95a3-e7b4df325f32 2014-12-12 10:48:20.545 UTC dd246eb5-f100-4546-9b42-72e4ecd69a15 2014-12-12 10:59:40.709 UTC e945ea59-2bc2-4182-99fa-1e0c4aef8fac 2014-12-12 10:49:16.766 UTC 4b0fc9de-a09d-4dba-b020-84e756c2bc73 2014-12-18 12:48:32.817 UTC 999a0b34-259a-4621-9546-6b41c07443e4 2014-12-12 12:28:39.333 UTC 9906e387-4eb0-4dd0-938c-ec365bec3a4b 2014-12-12 10:56:18.481 UTC