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InviteWorkflow Entry: Multiple Protein Alignment Profiling(1)
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 Version 2
(of 4)
|
Version created on:
20/08/09 @ 13:51:19
by:
Carol Lushbough
|
Revision comments 
Last edited on: 06/01/10 @ 22:07:49 by: Carol Lushbough
Title: A BioExtract Server Workflow version of the EMBOSS tutorial
Type: BioExtract Server
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Description
This workflow may be downloaded and imported into the BioExtract Server at bioextract.org.
This workflow is designed to demonstrate the use of EMBOSS based Soaplab services from within the BioExtract Server. It begins by querying UniProt for "ops2_*". This input query string may be modified to meet the needs of the researcher. A sequences resulting in the query are simultaneously scanned for predicted transmembrane regions and subjected to a multiple alignment using emma. This alignment is then plotted to a set of PNG images and also used to build a profile using the prophecy and prophet tools.
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Earliest Version:
[1] - A BioExtract Server Workflow version of the EMBOSS tutorial
Previous Versions:
[2] - A BioExtract Server Workflow version of the EMBOSS tutorial
Latest Version:
[4] - Multiple Protein Alignment Profiling(1)
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There are no workflows in myExperiment that use similar services to this Workflow.
Linked Data
Non-Information Resource URI: http://www.myexperiment.org/workflows/627/versions/2
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Copyright © 2007 - 2011 The University of Manchester and University of Southampton
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