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ChEBI-get_synonyms

Workflow Entry: ChEBI-get_synonyms

Created at: 14/11/07 @ 12:48:30

Version 1 (of 1)

Version created on: 14/11/07 @ 12:48:30 by: Duncan Hull | Revision comments Expand

Title: ChEBI-get_synonyms

Type: Taverna 1

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Workflow Components

Inputs (1)

Name	Description
chebi_id

Processors (5)

Name	Type	Description
getCompleteEntity	arbitrarywsdl
parametersXML	local
resultXML	local
returnXML	local
SynonymsXML	local

Beanshells (0)

Outputs (1)

Name	Description
out

Links (6)

Source	Sink
chebi_id	parametersXML:chebiId
SynonymsXML:data	out
getCompleteEntity:result	resultXML:input
parametersXML:output	getCompleteEntity:parameters
resultXML:return	returnXML:input
returnXML:Synonyms	SynonymsXML:input

Coordinations (0)

Information Workflow Type

Taverna 1

Information Original Uploader

Duncan Hull

Information License

All versions of this Workflow are licensed under:

Information Credits (1)

(People/Groups)

Duncan Hull

Information Attributions (0)

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Information Statistics

361 viewings

746 downloads

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Citations (0)

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Version History

Earliest Version:
[1] - ChEBI-get_synonyms

Created on: Wednesday 14 November 2007 @ 12:48:30 (GMT)

Created by: Duncan Hull

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This Workflow only has one version.

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Other workflows that use similar services (2)

Taverna 1

Original Uploader

Paul Fisher

inchi to Chebi (v1)

Created: 22/05/09 @ 16:07:50

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflow converts an inchi string to a chebi id.

Rating: 0.0 / 5 (0 ratings) | Versions: 1 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 24 times | Downloaded: 2 times

Tags (3):

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Taverna 1

Original Uploader

Sirisha Gollapudi

ChEBI-get_synonyms (v2)

Created: 19/11/07 @ 13:45:42 | Last updated: 19/11/07 @ 13:54:44

Credits: Sirisha Gollapudi

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflow takes a list of entity names separated by a newline and queries the ChEBI database for synonyms. Thanks to Paul Fisher for resolving the problems with the XML Splitter by using an XPath statement to retrieve synonyms.

Rating: 5.0 / 5 (1 rating) | Versions: 2 | Reviews: 0 | Comments: 0 | Citations: 0

Viewed: 60 times | Downloaded: 31 times

Tags (2):

View