Original Uploader

Paul Fisher

microRNA to KEGG Pathways and Abstracts (v1)

Created: 17/03/10 @ 10:53:06 | Last updated: 17/03/10 @ 10:53:11

Credits: Paul Fisher

Attributions: Pathways and Gene annotations for QTL region

License: Creative Commons Attribution-Share Alike 3.0 Unported License

Workflow takes in a text file of microRNAs from microCOSM (at the EBI) and outputs a list of KEGG pathway information, including genes in pathways and pathway abstracts from PubMed. The results can then be used in various text mining applications/workflows to rank the results against a given disease.Workflow takes in a file of microRNAs

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Original Uploader

Paul Fisher

[untitled] (v1)

Created: 16/03/10 @ 16:33:37 | Last updated: 16/03/10 @ 16:33:38

Credits: Paul Fisher

License: Creative Commons Attribution-Share Alike 3.0 Unported License

No description

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Original Uploader

Annsofie Anderssson

SPARQL query for QSAR data (v1)

Created: 16/03/10 @ 11:26:40 | Last updated: 16/03/10 @ 11:26:42

Credits: Annsofie Anderssson

License: Creative Commons Attribution-Share Alike 3.0 Unported License

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Original Uploader

abretaud

Cross-references search, duplicated genes search, cross-reference fetch (v1)

Created: 16/03/10 @ 08:13:50 | Last updated: 16/03/10 @ 08:18:08

Credits: abretaud

License: Creative Commons Attribution-Share Alike 3.0 Unported License

This workflow is composed of 3 steps: -First, it search for Ensembl gene Ids matching a list of identifier, using the GenOuest Xref webservice. -Then it uses the Duplicated Genes Database webservice to search for duplication information about each found gene. -Finally, it uses the GenOuest Xref webservice to fetch external identifier for each found gene (GO term in this example).

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