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Tag: kegg Licence: by-sa

Workflow UnigeneID to KEGG Pathways (3)

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This workflow accepts a list of Unigene gene identifiers and returns descriptions of gene functions and a list of all pathways each gene is involved in (plus pathway image) from the KEGG database. This workflow replaces the earlier SOAP version with the new KEGG REST services

Created: 2012-01-16 | Last updated: 2012-12-17

Credits: User Katy Wolstencroft User Paul Fisher

Attributions: Workflow NCBI Gi to Kegg Pathways

Workflow NCBI Gi to Kegg Pathway Descriptions (5)

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This workflow accepts a list of NCBI gene identifiers and returns descriptions of gene functions and a list of all pathways each gene is involved in (plus pathway image) from the KEGG database. This workflow replaces the earlier SOAP version with the new KEGG REST services

Created: 2012-01-12 | Last updated: 2013-01-30

Credits: User Katy Wolstencroft

Attributions: Workflow NCBI Gi to Kegg Pathways

Workflow omim and pathways (2)

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This workflow searches OMIM for entries associated with a particular disease in OMIM, returns the IDs and maps them to Kegg Gene IDs. For each gene, it then gets the description and any corresponding pathways those genes are involved with

Created: 2009-03-03 | Last updated: 2009-11-02

Credits: User Katy Wolstencroft User Paul Fisher

Attributions: Workflow Get Kegg Gene information

Workflow chebi2keggID (1)

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This workflow converts a (list of) chebi identifiers to kegg compound identifiers.

Created: 2016-06-21

Credits: User Kristina Hettne

Uploader

Workflow GOgetter (no merge) (1)

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Retrieves all GO terms (with experimental evidence) associated with the given genelist. The GO terms are returned in a list per gene.

Created: 2016-06-10

Credits: User Davy Cats User Tom Rosman

Workflow pathway difference in ortholog genes (1)

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This workflow looks at a set of human genes and search for the orthologs of mouse and rat. Then it gets for all the genes the pathways linked to it in Kegg and search for difference in them.

Created: 2016-06-10

Credits: User Tom Rosman User Davy Cats

Uploader

Workflow GOgetter (2)

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Retrieves all GO terms with experimental evidence associated with the given genelist. A GO term may apear multiple times in the resulting list if it is associated with multiple genes.

Created: 2016-06-10 | Last updated: 2016-06-10

Credits: User Davy Cats User Tom Rosman

Workflow Metabolite pathway search (1)

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The workflow searches for metabolomic pathways that match the entered keywords and returns information about the chosen pathway

Created: 2014-12-18

Credits: User Alan Williams

Workflow get_Disease_Id_by_Pathway (1)

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retrieve Disease Id related to a gien pathway in KEGG db

Created: 2012-10-19

Credits: User Massimo La Rosa User Antonino Fiannaca

Workflow Gene_To_Pathways (Vistrails) (1)

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This workflow retrieves the pathways that are associated with given Kegg gene identifiers.

Created: 2012-08-06 | Last updated: 2012-08-08

Credits: User Khalid Belhajjame

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