Workflows

Search filter terms
Filter by type
Filter by tag
Filter by user
Filter by licence
Filter by group
Filter by wsdl
Filter by curation
Results per page:
Sort by:
Showing 107 results. Use the filters on the left and the search box below to refine the results.
Tag: workflow

Workflow Replicator Activity sample for Trident v1.2 (1)

Thumb
The objective of this workflow is to explain the working of the Replicator activity in the Trident application. For detailed description of the worklfow please refer the following document. Sample Description

Created: 2010-09-03 | Last updated: 2010-09-03

Credits: Network-member Trident

Workflow For loop sample for Trident v1.2 (1)

Thumb
  Please refere following link for more information http://tridentworkflow.codeplex.com/Project/Download/FileDownload.aspx?DownloadId=138916

Created: 2010-08-19 | Last updated: 2010-08-24

Credits: Network-member Trident

Workflow Protein Mutation Analysis Using the BioExt... (1)

Thumb
This workflow, created using the BioExtract Server, contains a protein query (using the NCBI Protein Database), Blastp, ClustalW, Transeq, Garnier, PepWindowWall, PepInfo, and Octanol. For this workflow, a mutated protein sequence needs to be selected. Once the corresponding non-mutated sequence has been queried, the Blastp tool can be used to find sequences similar to the one queried, and the ClustalW tool can be used to analyze whether the mutation is conserved within species.  The Tra...

Created: 2010-07-22 | Last updated: 2010-07-22

Credits: User Kendra Giesey User Yosr Bouhlal Network-member BioExtract Server for Genomics

Workflow Phylogenetic Study Using the Bio Extract S... (2)

Thumb
This workflow, created using the BioExtract Server, contains a nucleotide query (using the NCBI Core Nucleotide Database), Blastn (against the Homo sapiens genome), Blastn (against the Mus musculus genome), the Format Conversion tool, the Fetch Translator Tool, and ClustalW. This workflow was created following the analytical steps described in the journal article "Resolution among major placental mammal interordinal relationships with genome data imply that speciation influenced the...

Created: 2010-06-17 | Last updated: 2010-07-19

Credits: User Kendra Giesey Network-member BioExtract Server for Genomics

Workflow Get KEGG gene descriptions and pathways (1)

Thumb
This workflow takes a list of KEGG gene identifiers and supplies descriptions associated to said genes + pathways including all genes and the descriptions associated to said pathways. The list_to_string local beanshell scripts merely transform a given list into a string of unique not-null elements separated by new lines (for batch btit use). Note that the input is a real taverna list : multiple values must be declared as multiple values instead of a single string value with distinct identif...

Created: 2010-04-30 | Last updated: 2010-04-30

Credits: User Nadia Cerezo User Paul Fisher

Attributions: Workflow Get Kegg Gene information

Workflow Angiogenesis Feature Extraction workflow (3)

Thumb
No description

Created: 2010-03-23 | Last updated: 2012-01-10

Credits: User Charalampos

Workflow raw2nexus taverna 2 workflow using pt-mapr... (5)

Thumb
No description

Created: 2013-12-12 | Last updated: 2014-06-20

Credits: User Alastairduncan

Results per page:
Sort by: