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Showing 23 results. Use the filters on the left and the search box below to refine the results.
Type: Galaxy Licence: by-sa

Workflow Clustered heatmap of signals around the TSSs (1)

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Galaxy workflow based on deepTools which creates a clustered heatmap of signals around the TSS. One bigwig file is needed as input with the signal and an annotation file with your TSS regions. The output will be a heatmap. You can create such a bigwig file with the bamCorrelate toolFor more information please see the deepTools wiki. This workflow is also available via the Galaxy Tool Shed.

Created: 2014-04-03 | Last updated: 2014-04-03

Credits: User Björn Grüning

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Workflow MergePeptides (1)

A example Galaxy pipeline for removing redundancy in peptides within quantitative proteomics analysis.

Created: 2014-03-31 | Last updated: 2014-03-31

Credits: User hindlem

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Workflow Variant discovery and reference correction... (1)

Error identification and error correction of reference genome assembly from deep-seq Illumina reads.

Created: 2013-05-14 | Last updated: 2013-05-14

Credits: User Robsyme

Workflow AnnotationTimes (1)

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This very simple workflow was used in the analysis of the metadata produced by the human annotation phase of the SALAMI (Strucural Analysis of Large Amounts of Music Inforamtion) project.  The input data is the metadata available from http://ddmal.music.mcgill.ca/salami/annotations It produces a histogram of song durations and scatterplot of combined annotation time verus song duration. The fields are   SONG_ID                   Un...

Created: 2012-07-16 | Last updated: 2012-07-16

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Workflow galaxy_101 (2)

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  This is a Galaxy pipeline written using the Galaxy 101 tutorial (https://main.g2.bx.psu.edu/galaxy101). The pipeline involves retrieving genome and SNP data from UCSC for a particular chromosome. These data are integrated in order to find exons with the highest number of SNPs.

Created: 2012-06-13 | Last updated: 2012-06-14

Credits: User Peter Li

Workflow Trim Reads Based on Quality (1)

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Created: 2015-02-28 | Last updated: 2015-02-28

Credits: User jason limberis

Workflow Trim Reads Based on Quality (1)

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Created: 2015-02-28

Credits: User jason limberis

Workflow Prokaryotic Single-End Analysis (1)

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Created: 2015-02-28

Credits: User jason limberis

Workflow Prokaryotic Paired-End Analysis (1)

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Created: 2015-02-28

Credits: User jason limberis

Workflow Eukaryotic Single-End Analysis (1)

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Created: 2015-02-28

Credits: User jason limberis

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