Workflows

Search filter terms
Filter by type
Filter by tag
Filter by user
Filter by licence
Results per page:
Sort by:
Showing 3 results. Use the filters on the left and the search box below to refine the results.
Type: Galaxy Licence: MIT
Uploader

Workflow AmrPlusPlus Paired Workflow (9)

AmrPlusPlus is a Galaxy-based metagenomics pipeline that is intuitive and easy to use. The pipeline takes advantage of current and new tools to help identify and characterize resistance genes from metagenomic sequence data.

Created: 2016-08-05 | Last updated: 2016-11-18

Credits: User Chris

Uploader

Workflow AmrPlusPlus Single Workflow (2)

AmrPlusPlus is a Galaxy-based metagenomics pipeline that is intuitive and easy to use. The pipeline takes advantage of current and new tools to help identify and characterize resistance genes from metagenomic sequence data.

Created: 2016-08-12 | Last updated: 2017-01-05

Credits: User Chris

Uploader

Workflow Species of top BLAST hits (1)

Thumb
Galaxy workflow for counting species of top BLAST hits.This is an example workflow using the Galaxy wrappers for NCBI BLAST+, see https://github.com/peterjc/galaxy_blast and http://dx.doi.org/10.1101/014043This Galaxy workflow (file blast_top_hit_species.ga) is intended for an initial assessment of a transcriptome assembly to give a crude indication of any major contamination present based on the species of the top BLAST hit of 1000 representative sequences.Development of this workflow is und...

Created: 2015-04-08 | Last updated: 2015-04-08

Credits: User Peter Cock

Results per page:
Sort by: