All content

Search filter terms
Filter by category
Filter by type
Filter by tag
Filter by user
Filter by licence
Filter by group
Filter by wsdl
Results per page:
Sort by:
Showing 20 results. Use the filters on the left and the search box below to refine the results.
Category: Workflow Tag: list

Workflow CountListElements (5)

Thumb
Very simple workflow to count the number of items in a list (top level only in case of nested lists). Does no more than count = list.size();

Created: 2007-10-17 | Last updated: 2007-10-17

Workflow CloneItemsInList (1)

Thumb
Utility workflow that clones an item copy_number times. You can use this to work around standard iteration strategies, e.g. in combination with the CountListItems workflow. Workflow examples: TestIterationStrategy_withClones. For an alternative approach see TestIterationStrategy_withNesting. Example I/O: input: A copy_number: 3 result: [A,A,A] input: [A,B,C] copy_number: 3 result: [[A,A,A][B,B,B][C,C,C]] input: [A,B,C] copy_number: [3,2] result: [[[A,A,A],[A,A]][[B,B,B],[B,B]],[[C,C,C],...

Created: 2007-11-29

Credits: User Marco Roos

Workflow TestIteratorStrategy_withCloning (2)

Thumb
This workflow implements a strategy for this problem: > I would like to perform an iteration including a dot product between > a list and a list of lists; example: > Input: > > [1] (1) > [A,B,C] (2) > [[a,b],[c,d],[e,f]] (3) > > Desired output: > > [1Aa, 1Ab, 1Bc, 1Bd, 1Ce, 1Cf] In this implementation a java beanshell is used to clone the items in list 2 as many times per item as there are items in the sublists of list 3. The iteration stra...

Created: 2007-11-29 | Last updated: 2007-11-29

Credits: User Marco Roos

Workflow fetch_fasta (1)

Thumb
This work flow is designed to take an EMBL file containing the genomic data for an identified bacterium. From this information the workflow can determine whether or not that this strain is an MRSA type of bug. This can be determined based on the MecA profile of the given strain. Blast is utilised to find a relationship with given proteins and that of know S. aureus strains. This phylogenic output is generated from a ClustalW algorithm that plots a phylogenic tree. The output is prese...

Created: 2009-03-20 | Last updated: 2009-03-20

Credits: User Jumblejumble

Uploader

Workflow Select items from list (1)

Thumb
This workflow pops up a window containing an input list of strings. The user is invited to select one or more strings for downstream processing.

Created: 2010-03-30

Credits: User Peter Li

Workflow Pipelined list iteration (1)

Thumb
Perform multiple iterations of services in order to show pipelining

Created: 2009-07-03

Credits: User Stian Soiland-Reyes User Ian Dunlop

Workflow Search InChI in ChemSpider (1)

Thumb
This workflows queries ChemSpider for compound information and compound images. Note that a Chemspider security token is needed in order to access some of the ChemSpider services (receive one by registering at ChemSpider). Possible search terms might be InChI codes, ChemSpider identifiers or names.

Created: 2009-03-30 | Last updated: 2009-03-30

Credits: User Michael Gerlich

Workflow chebi2keggID (1)

Thumb
This workflow converts a (list of) chebi identifiers to kegg compound identifiers.

Created: 2016-06-21

Credits: User Kristina Hettne

Workflow ImportConvertEnsembl (1)

Thumb
This workflow accepts a spreadsheet file as input and extracts a list of ENSEMBL Gene IDs from column A. The hsapiens_gene_ensembl service converts these IDs to Entrez_geneIds

Created: 2014-09-05

Credits: User Katy Wolstencroft

Workflow Empty list output (1)

Thumb
Simply returns a single port, depth 1, with nothing in it.

Created: 2014-01-24

Credits: User Robert Haines User Alan Williams

Results per page:
Sort by: