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Category: Workflow Type: Taverna 1 Curation: component - part of whole solution
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Taverna 1
Uploader
4399?size=60x60 Gb Paul Fisher

Workflow Entrez Gene to KEGG Pathway (5)

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This workflow takes in Entrez gene ids then adds the string "ncbi-geneid:" to the start of each gene id. These gene ids are then cross-referenced to KEGG gene ids. Each KEGG gene id is then sent to the KEGG pathway database and its relevant pathways returned.

Created: 2009-12-04 | Last updated: 2010-11-30

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow sub_gene_info_to_uniprot.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow gene_ontology_analysis.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow gene_ontology_analysis_2.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow parse_uniprot_2.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow ensembl_gene_info.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow add_ncbi_to_string.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow geneId_to_pathway.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

Taverna 1
Uploader
97?size=60x60 Be Antoon Goderis

Workflow remove_nulls.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: User Paul Fisher

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