myExperiment - Content

All content

Results per page:

Sort by:

Showing 1 result.

Category: Workflow

Type: Galaxy

User: Vilija Lomeikaite

Remove all filters

Galaxy

Uploader

Vilija Lomeikaite

Human MSH3 exon 1 variant genotyping (1)

Download

This workflow is designed to genotype 9 bp tandem repeat region in MSH3 exon 1 as well as flanking variants described in Flower and Lomeikaite et al. (2018). Detailed description as follows:1. Input files.Input files for the workflow are demultiplexed fastq files from MiSeq Illumina sequencing. 2. Read merging.To enable obtaining haplotype information, forward and reverse paired-end reads are merged using Pear with default settings. 3. Demultiplexing.Merged reads are demul...

Created: 2018-08-22 | Last updated: 2018-08-22

Results per page:

Sort by: