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Tag: taverna2

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Alex Nenadic

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Taverna 2.5 Enterprise Starter Pack

Created: 2014-04-02 12:54:33 | Last updated: 2017-01-09 12:01:51

This is a Starter Pack for Taverna 2.5 Enterprise edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Enterprise and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

18 items in this pack

Comments: 1 | Viewed: 220 times | Downloaded: 176 times

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Alex Nenadic

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Taverna 2.5 Core Starter Pack

Created: 2014-04-02 11:32:18 | Last updated: 2017-01-09 13:09:40

This is a Starter Pack for Taverna 2.5 Core edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Core and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

14 items in this pack

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Alan Williams

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Multiple selection

Created: 2015-03-31 11:23:55 | Last updated: 2015-03-31 11:37:25

Credits: Alan Williams

License: Creative Commons Attribution-Share Alike 3.0 Unported License

An interaction page that allows multiple selections from a list of values.There is a single input port of depth one called selectionValuesThere is a single output port of depth one called answers

File type: htm

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Alex Nenadic

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Taverna 2.5 Bioinformatics Starter Pack

Created: 2014-04-02 12:44:47 | Last updated: 2017-01-09 13:08:53

This is a Starter Pack for Taverna 2.5 Bioinformatics edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Bioinformatics and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

18 items in this pack

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Alex Nenadic

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Taverna 2.5 Biodiversity Starter Pack

Created: 2014-04-02 12:40:42 | Last updated: 2017-01-09 13:09:17

This is a Starter Pack for Taverna 2.5 Biodiversity edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Biodiversity and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

14 items in this pack

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Taverna 2

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Kalai

Download Structures from PubChem given che... (1)

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This workflow takes the input file containing chemical names and returns a single SDF file of structures. The names are searched against pubchem compounds via e-search. If the compound name is found an XML file containing PubChem ID is returned.The max return compound_ID is set to 1 which could be increased. If the compound name is not found then no ID is returned. The pubchem compound_ID is then used to download structures from PubChem.

Created: 2011-05-24 | Last updated: 2011-05-24

Credits: Kalai Michael Gerlich

Attributions: Download Entries from PubChem

Taverna 2

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Kalai

Plotting distribution of natural product l... (1)

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Prerequisite: CDK -Taverna Plugin 0.5.1 http://www.ts-concepts.de/cdk-taverna2/plugin/ - To run this workflow you need a Score file which is written to text file. - This could be generated from ScorerActivity.t2flow http://www.myexperiment.org/workflows/2121/download?version=1 Description of input ports : score_file: Path to file name that has pre computed scores. Note: While passing file as input it could be passed as list of many files or single fi...

Created: 2011-05-13 | Last updated: 2011-05-13

Credits: Kalai

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