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blast_simplifier.xml (1)

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Created: 2008-07-12 | Last updated: 2008-07-12

Credits: Paul Fisher

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Paul Fisher workflows for benchmarks PR and CA2

Created: 2008-07-12 20:26:49 | Last updated: 2008-07-13 09:21:55

77 items in this pack

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Trivial workflow which will initially fail, retry twice then fall over to the alternative specified for the FailingThing process.

Created: 2007-11-06 | Last updated: 2007-11-20

Credits: Antoon Goderis Carole Goble A. Random Scientist try it out

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Picture of me (2)

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If you enter http://www.cs.man.ac.uk/~goderisa as input I smile back at you as output.

Created: 2007-10-03

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Workflow re-use and discovery in bioinformatics

Created: 2008-10-03 16:34:45

Credits: Antoon Goderis

License: Creative Commons Attribution-No Derivative Works 3.0 Unported License

File type: Adobe PDF

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metabolic_pathway.xml (1)

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A list of Kegg entires are supplied to the Kegg database which then retrieves the associated metabolic pathways for each entry supplied. e.g. Ids takes in a value of 351, whilst abbr takes in a value of hsa. Thus hsa:351 corresponds to neurodegenerative disorders and alzheimers disease pathways. [fisherp@cs.man.ac.uk]

Created: 2008-07-12 | Last updated: 2008-07-12

Credits: Paul Fisher

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Peter Li workflows for benchmarks PR and CA2

Created: 2008-07-13 20:32:39 | Last updated: 2008-07-13 20:47:19

66 items in this pack

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Workflow discovery benchmarks

Created: 2008-07-12 11:20:23 | Last updated: 2008-10-09 16:41:46

7 items in this pack

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BLASTP with simplified results returned (2)

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Perform a blastp search on protein sequence and extract information based on the user input, e.g. a list of GI numbers. N.B. this workflow does not function correctly as it is designed for use with NCBI blast scripts. Some errors may occur. Please use two blast text file inputs for a secure result output.

Created: 2007-10-03

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User survey report

Created: 2008-10-10 09:44:52

Credits: Antoon Goderis

License: Creative Commons Attribution-Share Alike 3.0 Unported License

File type: Adobe PDF

Comments: 0 | Viewed: 41 times | Downloaded: 43 times

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