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User: Alex Nenadic

Workflow Example of conditional invocation (1)

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This workflow demonstrates how nested workflows can be conditionally invoked

Created: 2014-04-03

Credits: User Alex Nenadic

Workflow Example for external tools with zip and unzip (1)

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This workflow only works on a Unix machine. This workflow takes a fixed URL from which a text file is downloaded (output as Original_file). That file is zipped (output as Zipped_File) and then unzipped again (output as Unzipped_File). The orginal file and the unzipped version are then diff'd/

Created: 2014-04-03

Credits: User Alex Nenadic

Workflow EBI_InterproScan_NewServices (2)

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This workflow performs an interproscan at the EBI on sequences provided as input. The output is provided as text and xml. This workflow uses the new EBI services, which are asynchronous and require looping over the nested workflow (Status) until the workflow has finished. Many of the EBI services now work in this way, so you can use this workflow as an example of the invocation pattern and looping configuration.

Created: 2014-04-03 | Last updated: 2014-04-09

Credits: User Alex Nenadic

Workflow Demonstration of configurable iteration (2)

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This workflow shows the use of the iteration strategy editor to ensure that only relevant combinations of inputs are used during an implicit iteration.

Created: 2014-04-03 | Last updated: 2014-07-09

Credits: User Alex Nenadic

Creator

Pack Taverna 2.5 Bioinformatics Starter Pack


Created: 2014-04-02 12:44:47 | Last updated: 2017-01-09 13:08:53

This is a Starter Pack for Taverna 2.5 Bioinformatics edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Bioinformatics and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

18 items in this pack

Comments: 0 | Viewed: 74 times | Downloaded: 31 times

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Creator

Pack Taverna 2.5 Biodiversity Starter Pack


Created: 2014-04-02 12:40:42 | Last updated: 2017-01-09 13:09:17

This is a Starter Pack for Taverna 2.5 Biodiversity edition - it contains a number of example workflows to showcase various features of Taverna 2.5 Biodiversity and help you get started using it.Workflows from this Starter pack can also be found in the myExperiment perspective of the Taverna Workbench.Tutorials for Taverna are available under the Taverna 2.x documentation on the Taverna Web site.Also check out the Taverna User Manual.

14 items in this pack

Comments: 0 | Viewed: 72 times | Downloaded: 24 times

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Blob BiodiversityCatalogue presentation

Created: 2013-12-06 13:50:51 | Last updated: 2013-12-06 13:52:46

Credits: User Alex Nenadic

License: Creative Commons Attribution-Share Alike 3.0 Unported License

A set of slides on how to use and register services in BiodiversityCatalogue (presented by Aleksandra Nenadic at the Taverna workshop, 5-6 december 2013, Manchester).

File type: PowerPoint 2007 presentation

Comments: 0 | Viewed: 51 times | Downloaded: 4 times

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Workflow WS-Security + HTTPS example workflow (1)

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This workflow shows an example access to various secure Web services protected by WS-Security authentication. Use testuser/testpasswd whenever prompted for username and password. Check http://www.mygrid.org.uk/dev/wiki/display/story/Taverna+2.x+test+secure+services+and+workflows for more details about the secure services used in the workflow.

Created: 2010-12-03 | Last updated: 2010-12-03

Credits: User Alex Nenadic

Workflow WS-Security example workflow (1)

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This workflow shows an example access to various secure Web services protected by WS-Security authentication. Use testuser/testpasswd whenever prompted for username and password. Check http://www.mygrid.org.uk/dev/wiki/display/story/Taverna+2.x+test+secure+services+and+workflows for more details about the secure services used in the workflow.

Created: 2010-12-03 | Last updated: 2010-12-03

Credits: User Alex Nenadic

Workflow HTTP Digest authentication + HTTPS example... (1)

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This workflow shows an example access to a resource protected by HTTP Digest  authentication and HTTPS. Use testuser/testpasswd whenever prompted for username and password. Check http://www.mygrid.org.uk/dev/wiki/display/story/Taverna+2.x+test+secure+services+and+workflows for more details about the secure services used in the workflow.

Created: 2010-12-03 | Last updated: 2010-12-03

Credits: User Alex Nenadic

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