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2014-10-01 10:42:59 UTC
<h2><br /><strong>October 6th</strong></h2><p><br />1300 -> 1400 Arrival and lunch</p><p><br />1400 -> 1430 Introductions, round table, learning objectives</p><p><br />1430 -> 1530 Presentation: Introduction to Workflows with Taverna, myExperiment and BiodiversityCatalogue</p><ul><li>Register with myExperiment, join the group and download the ppts used for the rest of the day (below) </li><li><a href="http://www.myexperiment.org/files/1324/download">Introduction to myGrid</a></li></ul><p>1530 -> 1600 Coffee</p><p><br />1600 -> 1615 Setup check - Taverna and R should be preinstalled (instructions sent the week before); sorting out those who can't get it to work.</p><ul><li><a href="http://www.myexperiment.org/files/1318/download">Checking Taverna installation</a></li></ul><p>1615 -> 1730 Tutorial: Building a simple workflow. Using Taverna Workbench and exploring BiodiversityCatalogue</p><ul><li><a href="http://www.myexperiment.org/files/1327/download">Taverna introduction</a></li><li><a href="http://www.myexperiment.org/files/1326/download">Simple workflow</a></li><li><a href="http://www.myexperiment.org/files/1328/download">Using BiodiversityCatalogue</a></li></ul><h2><br /><br />October 7th</h2><p>0830 -> 0900 Coffee</p><p><br />0900 -> 0915 Recap on Taverna workbench, building simple workflows (interface etc.) [Demo by Aleksandra - if needed the ppt from the previous day will be used]</p><p><br />0915 -> 1030 Exploring BiodiversityCatalogue and extending the simple workflow </p><ul><li><a href="http://www.myexperiment.org/files/1325/download">Nested workflows</a></li></ul><p>1030 -> 1100 Coffee</p><p><br />1100 -> 1200 Tutorial: Extending the simple workflow. Inputting data directly, via local files, via URL's. Managing spreadsheet data. Importing and exporting data to / from workflows via spreadsheets</p><ul><li><a href="http://www.myexperiment.org/files/1322/download">Inputting data</a></li><li><a href="http://www.myexperiment.org/files/1333/download">XPath service</a></li></ul><p><br />1200 -> 1300 Tutorial: Advanced Taverna features [lists, looping, parallel execution]</p><ul><li><a href="http://www.myexperiment.org/files/1317/download">Advanced Taverna</a></li></ul><p>1300 -> 1400 Lunch</p><p><br />1400 -> 1445 Presentation: Demonstration of biodiversity workflows in the BioVeL portal</p><ul><li><a href="http://www.myexperiment.org/files/1331/download"> Working with BioVeL Portal</a></li></ul><p>1445 -> 1530 Tutorial: Using R in Taverna Workbench</p><ul><li><a href="http://www.myexperiment.org/files/1330/download">Using R in Taverna</a></li></ul><p>1530 -> 1600 Coffee</p><p><br />1600 -> 1630 Using R in Taverna Workbench Continued</p><p><br />1630 -> 1730 Tutorial: VLIZ services in BiodiversityCatalogue and use in Taverna</p><ul><li><a href="http://www.myexperiment.org/files/1332/download"><span style="line-height: 1.4;">WoRMS and OBIS services</span></a></li></ul><h2>October 8th</h2><p><br />0900 -> 0930 Recap</p><p><br />0930 -> 1030 Tutorial: Components in Taverna</p><ul><li><a href="http://www.myexperiment.org/files/1319/download">Components</a></li></ul><p>1030 -> 1100 Coffee Break</p><p><br />1100 -> 1200 Tutorial: Tool service</p><ul><li><a href="http://www.myexperiment.org/files/1329/download">Tool service</a></li></ul><p>1200 -> 1230 Presentation:</p><ul><li><a href="http://www.myexperiment.org/files/1320/download">Embedding workflows in your website</a></li></ul><p>1230 -> 1315 Discussion and wrap up</p><ul><li><a href="http://www.myexperiment.org/files/1321/download">help</a></li></ul><p>1315 -> 1400 Lunch</p>
VLIZ Workshop Oct 2014
Alan Williams
taverna 2
biodiversity
biovel