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User: Wdsnellg
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Workflow Extract Gene Sequence with Kepler (1)

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This is a workflow which allows one to extract gene sequence information using the accession number as the input.  Multiple outputs include a file output of sequence header information, as well as one output window of base pair count, ratios and gene sequence.

Created: 2011-10-05 | Last updated: 2011-10-05

Credits: User Wdsnellg

Creator

Pack Extract Gene Sequence Information with Kepler


Created: 2011-10-05 04:58:33 | Last updated: 2011-10-05 06:11:56

This workflow and pack were designed for a class project.  The Kepler based workflow allows one to extract specific information from a gene sequence by using the accession ID as input.  By using two web services created for the DNA Data Bank of Japan (DDBJ, http://www.xml.nig.ac.jp/wabi/Method?serviceName=DDBJ&mode=methodList&lang=en), one can extract the sequence header information as an output file, as well as retrieve the sequence, base pair count, and base pair ratios in...

5 items in this pack

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Workflow Fetch Buni in Kepler (1)

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This Kepler allows one to fetch a Buni comic from the image URL.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: User Wdsnellg

Uploader

Workflow Simple addition Kepler workflow expanded (1)

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This Kepler allows one to perform mathematical equations, including addition, subtraction, muliplication, and division. 

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: User Wdsnellg

Uploader

Workflow String input for Kepler (1)

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This Kepler workflow allows one to display multiple strings together with the use of a display actor with its input multiport.  The result is each string output on a line, but all together.

Created: 2011-09-27 | Last updated: 2011-09-27

Credits: User Wdsnellg

Uploader

Workflow Single list with statistics values (#2 Par... (1)

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This workflow allows one to produce a single list of statistical output with the list name, average, and standard deviation of the values.  This workflow only produces the average and standard deviation from the input values

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: User Wdsnellg

Uploader

Workflow Statistics example (1)

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This workflow allows one to find the average and standard deviation of a set of values.

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: User Wdsnellg

Uploader

Workflow Population histogram in R (1)

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This workflow fetches the details of the countries in the world and then uses R to produce a histogram of the log of their population

Created: 2011-09-21 | Last updated: 2011-09-21

Credits: User Wdsnellg

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