Perform a blastp search on protein sequence and extract information based on the user input, e.g. a list of GI numbers.
gi
blastp
MSSRIARALALVVTLLHLTRLALSTCPAACHCPLEAPKCAPGVGLVRDGCGCCKVCAKQL
Execute Blast
http://xml.nig.ac.jp/wsdl/Blast.wsdl
searchSimple
SWISS
Simplifies BLAST output for later use
http://phoebus.cs.man.ac.uk:1977/axis/services/seq_analysis.blastsimplifier
net.sourceforge.taverna.scuflworkers.ncbi.ProteinFastaWorker
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org.embl.ebi.escience.scuflworkers.java.SplitByRegex