Workflow32MIQL00 BRCA2 2015-11-05 22:51:57.625 UTC first_result00 0 2015-11-05 22:51:37.519 UTC max_result00 10 2015-11-05 22:51:51.519 UTC status0idA_and_idB1REST_ServicemaxResults0firstResult0MIQL0responseBody00status00net.sf.taverna.t2.activitiesrest-activity1.5net.sf.taverna.t2.activities.rest.RESTActivity GET http://www.ebi.ac.uk/Tools/webservices/psicquic/intact/webservices/current/search/query/{MIQL}?firstResult={firstResult}&maxResults={maxResults} application/xml application/xml String false false false false true firstResult java.lang.String MIQL java.lang.String maxResults java.lang.String net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokenestedMITAB0results11net.sf.taverna.t2.activitiesdataflow-activity1.5net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeREST_ServicemaxResultsmax_resultREST_ServicefirstResultfirst_resultREST_ServiceMIQLMIQLnestedMITABREST_ServiceresponseBodystatusREST_ServicestatusidA_and_idBnestedresults 051727f2-a317-4b43-9898-519379a5d816 2015-11-05 22:32:18.948 UTC 388e1eef-0246-4257-974a-74d82e25bd15 2015-11-05 22:52:03.290 UTC 3f82fb1e-c3a3-49ec-874e-eca7f18e19d9 2015-11-05 22:51:14.353 UTC 8862f08c-4fed-470f-9707-3582911cd6d5 2015-11-05 22:31:09.222 UTC 2ba6d032-9e2c-4635-9ca0-1a9e24c8dd49 2015-11-05 22:05:18.78 UTC nestedMITAB00 Input in MITAB format 2015-11-05 21:37:03.377 UTC uniprotkb:Q9W157 uniprotkb:Q27297 intact:EBI-178981|uniprotkb:Q494G5|uniprotkb:B2CPK7|uniprotkb:B2CPK8|uniprotkb:Q8MRU0|intact:EBI-499914 intact:EBI-458769|uniprotkb:Q8IGG8|uniprotkb:Q8IMJ5|uniprotkb:Q9VAA8 psi-mi:brca2_drome(display_long)|uniprotkb:Brca2(gene name)|psi-mi:Brca2(display_short)|uniprotkb:CG30169(orf name) psi-mi:rad51_drome(display_long)|uniprotkb:Rad51(gene name synonym)|uniprotkb:CG7948(orf name)|uniprotkb:RecA protein homolog(gene name synonym)|uniprotkb:Protein spindle-A(gene name synonym)|uniprotkb:spn-A(gene name)|psi-mi:spn-A(display_short)|uniprotkb:DMR(gene name synonym) psi-mi:"MI:0399"(two hybrid fragment pooling approach) Formstecher et al. (2005) pubmed:15710747|imex:IM-16519|mint:MINT-5217543 taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-508685|imex:IM-16519-1054 author score:A|intact-miscore:0.37 uniprotkb:Q9BXW9 uniprotkb:P51587 intact:EBI-359343|uniprotkb:Q2LA86|uniprotkb:Q69YP9|uniprotkb:Q6PJN7|uniprotkb:Q9BQ06|uniprotkb:Q9H9T9 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 psi-mi:facd2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:FANCD2(gene name)|psi-mi:FANCD2(display_short) psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Hussain et al. (2004) pubmed:15115758 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-446104 intact-miscore:0.69 uniprotkb:P51587 uniprotkb:Q9BXW9 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 intact:EBI-359343|uniprotkb:Q2LA86|uniprotkb:Q69YP9|uniprotkb:Q6PJN7|uniprotkb:Q9BQ06|uniprotkb:Q9H9T9 psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:facd2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:FANCD2(gene name)|psi-mi:FANCD2(display_short) psi-mi:"MI:0019"(coimmunoprecipitation) Hussain et al. (2004) pubmed:15115758 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-446109 intact-miscore:0.69 uniprotkb:Q06609 uniprotkb:P51587 intact:EBI-297202|uniprotkb:Q6FHX9|uniprotkb:B0FXP0|uniprotkb:Q9BV60|intact:EBI-1059207|uniprotkb:B2R8T6|uniprotkb:Q6ZNA8 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 psi-mi:rad51_human(display_long)|uniprotkb:RAD51 homolog A(gene name synonym)|uniprotkb:RAD51(gene name)|psi-mi:RAD51(display_short)|uniprotkb:RAD51A(gene name synonym)|uniprotkb:RECA(gene name synonym) psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Chen et al. (1998) pubmed:9560268 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-298257 intact-miscore:0.97 uniprotkb:P51587 uniprotkb:Q06609 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 intact:EBI-297202|uniprotkb:Q6FHX9|uniprotkb:B0FXP0|uniprotkb:Q9BV60|intact:EBI-1059207|uniprotkb:B2R8T6|uniprotkb:Q6ZNA8 psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:rad51_human(display_long)|uniprotkb:RAD51 homolog A(gene name synonym)|uniprotkb:RAD51(gene name)|psi-mi:RAD51(display_short)|uniprotkb:RAD51A(gene name synonym)|uniprotkb:RECA(gene name synonym) psi-mi:"MI:0096"(pull down) Chen et al. (1998) pubmed:9560268 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-298264 intact-miscore:0.97 uniprotkb:Q9W157 uniprotkb:O77135 intact:EBI-178981|uniprotkb:Q494G5|uniprotkb:B2CPK7|uniprotkb:B2CPK8|uniprotkb:Q8MRU0|intact:EBI-499914 intact:EBI-185987 psi-mi:brca2_drome(display_long)|uniprotkb:Brca2(gene name)|psi-mi:Brca2(display_short)|uniprotkb:CG30169(orf name) psi-mi:o77135_drome(display_long)|uniprotkb:spn-B(gene name)|psi-mi:spn-B(display_short)|uniprotkb:CG3325(orf name)|uniprotkb:Dmel_CG3325(orf name) psi-mi:"MI:0018"(two hybrid) Giot et al. (2003) pubmed:14605208|imex:IM-16524|mint:MINT-5216804 taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-260802|imex:IM-16524-14711 author score:0.99|author score:high|intact-miscore:0.37 uniprotkb:P51587 intact:EBI-539895 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 - psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:peptide-linker(display_short)|psi-mi:EBI-539895(display_long) psi-mi:"MI:0114"(x-ray crystallography) Pellegrini et al. (2002) pubmed:12442171 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-297231|rcsb pdb:1N0W intact-miscore:0.40 uniprotkb:P51587 uniprotkb:Q06609 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 intact:EBI-297202|uniprotkb:Q6FHX9|uniprotkb:B0FXP0|uniprotkb:Q9BV60|intact:EBI-1059207|uniprotkb:B2R8T6|uniprotkb:Q6ZNA8 psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:rad51_human(display_long)|uniprotkb:RAD51 homolog A(gene name synonym)|uniprotkb:RAD51(gene name)|psi-mi:RAD51(display_short)|uniprotkb:RAD51A(gene name synonym)|uniprotkb:RECA(gene name synonym) psi-mi:"MI:0114"(x-ray crystallography) Pellegrini et al. (2002) pubmed:12442171 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-297231|rcsb pdb:1N0W intact-miscore:0.97 uniprotkb:Q06609 uniprotkb:P51587 intact:EBI-297202|uniprotkb:Q6FHX9|uniprotkb:B0FXP0|uniprotkb:Q9BV60|intact:EBI-1059207|uniprotkb:B2R8T6|uniprotkb:Q6ZNA8 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 psi-mi:rad51_human(display_long)|uniprotkb:RAD51 homolog A(gene name synonym)|uniprotkb:RAD51(gene name)|psi-mi:RAD51(display_short)|uniprotkb:RAD51A(gene name synonym)|uniprotkb:RECA(gene name synonym) psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Chen et al. (1999) pubmed:10551859 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-297257 intact-miscore:0.97 uniprotkb:Q06609 uniprotkb:P51587 intact:EBI-297202|uniprotkb:Q6FHX9|uniprotkb:B0FXP0|uniprotkb:Q9BV60|intact:EBI-1059207|uniprotkb:B2R8T6|uniprotkb:Q6ZNA8 intact:EBI-79792|uniprotkb:Q5TBJ7|uniprotkb:O00183|uniprotkb:O15008|uniprotkb:Q13879 psi-mi:rad51_human(display_long)|uniprotkb:RAD51 homolog A(gene name synonym)|uniprotkb:RAD51(gene name)|psi-mi:RAD51(display_short)|uniprotkb:RAD51A(gene name synonym)|uniprotkb:RECA(gene name synonym) psi-mi:brca2_human(display_long)|uniprotkb:FACD(gene name synonym)|uniprotkb:Fanconi anemia group D1 protein(gene name synonym)|uniprotkb:BRCA2(gene name)|psi-mi:BRCA2(display_short)|uniprotkb:FANCD1(gene name synonym) psi-mi:"MI:0019"(coimmunoprecipitation) Chen et al. (1999) pubmed:10551859 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-297268 intact-miscore:0.97 2015-11-05 21:36:29.297 UTC results1find_idA_and_idBMITAB0results11 Splits MITAB file and filters only idA and idB out 2015-11-05 21:53:12.411 UTC net.sf.taverna.t2.activitiesbeanshell-activity1.5net.sf.taverna.t2.activities.beanshell.BeanshellActivity MITAB 0 text/plain java.lang.String true results 1 1 workflow net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2.coreworkflowmodel-impl1.5net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokefind_idA_and_idBMITABMITABresultsfind_idA_and_idBresults 36e9788f-b782-47f6-bd54-3e72725d56a5 2015-11-05 21:37:13.521 UTC 4aa04559-d476-4c02-8e42-83cdb32ddeee 2015-11-05 21:44:57.330 UTC e5ea0044-090b-4d9b-a533-62d7e74a36b9 2015-11-05 17:03:23.332 UTC bfaf6b8c-5a20-49bc-a30c-890d38009311 2015-11-05 21:38:52.581 UTC nested 2015-11-05 17:03:05.468 UTC 5a8ca215-792a-4c30-87f9-13e1478f30b8 2015-11-05 21:42:40.58 UTC 75dc7bf3-2fb2-4789-acd5-c1377b746d73 2015-11-05 21:41:23.368 UTC dfdac174-27af-4ada-ba78-4a808693da64 2015-11-05 21:47:40.973 UTC 32652de9-dcb6-4256-bf54-09f01f32e4ba 2015-11-05 21:39:39.81 UTC Result of find_idA_and_idB 2015-11-05 21:53:39.502 UTC 393cff93-fb9d-40b4-8dbc-f030399e6bc2 2015-11-05 21:56:51.509 UTC 75210f2a-5b35-4e38-a57d-739c81f8ee92 2015-11-05 21:46:08.357 UTC e40670b5-1e56-474f-a20f-fab9ec98cbaa 2015-11-05 21:51:05.165 UTC 58de22dd-6eb8-47ed-a34e-8fe84e2539f8 2015-11-05 21:40:37.930 UTC 04e80bf9-d713-408b-876b-31c136c1a08b 2015-11-05 21:33:24.866 UTC