10
200
org.embl.ebi.escience.scuflworkers.java.SliceList
org.embl.ebi.escience.scuflworkers.java.StringListMerge
String old1="<ExecuteResponse xmlns=\"http://caarray.geworkbench.columbia.edu/CaArrayScrub\">";
String old2="</ExecuteResponse>";
String new1="<m:bioAssay xmlns:m=\"http://mage.preprocessdataset.service.cagrid.genepattern.org/PreprocessDatasetMAGEService\">";
String new2=" </m:bioAssay>";
String output2 = input.replaceFirst(old1, new1);
output = output2.replaceAll(old2, new2);
input
output
//String old1="<PerformAnalysisResponse xmlns=\"http://mage.preprocessdataset.service.cagrid.genepattern.org/PreprocessDatasetMAGEService\">";
//String old2="</PerformAnalysisResponse>";
String new1="<m:bioAssay xmlns:m=\"http://mage.preprocessdataset.service.cagrid.genepattern.org/PreprocessDatasetMAGEService\">";
String new2="</m:bioAssay>";
//String output2 = input.replaceFirst(old1, new1);
//output = output2.replaceAll(old2, new2);
output = new1+input+new2;
input
output
org.embl.ebi.escience.scuflworkers.java.XMLOutputSplitter
test.cql
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
both
euclidean
complete
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
2.1f
3.14159E0
false
true
1
3f
100f
1
0
discretize
1f
20f
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
org.embl.ebi.escience.scuflworkers.java.XMLInputSplitter
http://cagridnode.c2b2.columbia.edu:8080/wsrf/services/cagrid/CaArrayScrub?wsdl
execute
http://cagridnode.c2b2.columbia.edu:8080/wsrf/services/cagrid/HierarchicalClusteringMage?wsdl
execute
http://node255.broad.mit.edu:6060/wsrf/services/cagrid/PreprocessDatasetMAGEService?wsdl
performAnalysis