dataflow81bmurisinsertedcounttype_countSearch_Bio2RDF_atlasnamespace0term0limit0bmuris11net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeNamespace_list_to_searchvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity geneid,uniprot,omim,pubmed,go net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSearched_termvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity hiv net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_string_into_liststring0split11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true string 0 'text/plain' java.lang.String true regex 0 'text/plain' 1 split 1 l('text/plain') net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeResult_limit_100value00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 100 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeInsert_triples_in_local_graphbmuri0graph0triples_inserted00net.sf.taverna.t2.activitiesdataflow-activity0.4net.sf.taverna.t2.activities.dataflow.DataflowActivitynet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeVirtuoso_servervalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity http://localhost:8890/ net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConcatenate_two_stringsstring20string10output00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true string1 0 'text/plain' java.lang.String true string2 0 'text/plain' 0 output 0 'text/plain' net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCount_triplesvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity sparql?default-graph-uri=http%3A%2F%2Flocalhost%3A8890%2Fhiv&should-sponge=&query=SELECT+count(*)+WHERE+{%3Fs+%3Fp+%3Fo}&format=text%2Fhtml&debug=on net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSPARQL_querybase0url0contents00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true url 0 'text/x-taverna-web-url' java.lang.String true base 0 'text/x-taverna-web-url' 0 contents 0 'text/plain,text/html' net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSPARQL_query_2url0base0contents00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true url 0 'text/x-taverna-web-url' java.lang.String true base 0 'text/x-taverna-web-url' 0 contents 0 'text/plain,text/html' net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeCount_typevalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity sparql?default-graph-uri=http%3A%2F%2Flocalhost%3A8890%2Fhiv&should-sponge=&query=SELECT+%3Ftype%2C+count(*)+%0D%0AWHERE+{%0D%0A%3Fs+<http%3A%2F%2Fwww.w3.org%2F1999%2F02%2F22-rdf-syntax-ns%23type>+%3Ftype+.%0D%0A}&format=text%2Fhtml&debug=on net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSearch_Bio2RDF_atlasnamespaceSplit_string_into_listsplitSearch_Bio2RDF_atlastermSearched_termvalueSearch_Bio2RDF_atlaslimitResult_limit_100valueSplit_string_into_liststringNamespace_list_to_searchvalueInsert_triples_in_local_graphbmuriSearch_Bio2RDF_atlasbmurisInsert_triples_in_local_graphgraphConcatenate_two_stringsoutputConcatenate_two_stringsstring2Searched_termvalueConcatenate_two_stringsstring1Virtuoso_servervalueSPARQL_querybaseVirtuoso_servervalueSPARQL_queryurlCount_triplesvalueSPARQL_query_2urlCount_typevalueSPARQL_query_2baseVirtuoso_servervaluebmurisSearch_Bio2RDF_atlasbmurisinsertedInsert_triples_in_local_graphtriples_insertedcountSPARQL_querycontentstype_countSPARQL_query_2contents What is known about HIV 2009-02-05 00:11:11.128 EST To answer this question Bio2RDF Atlas about mouse and human genome is searched. The selected URIs are then loaded into the local Virtuoso triplestore at http://localhost:8890/sparql. You must enable insert into the graph. Once the mashup is built, 2 sparql queries analyse the obtained graph. This is the correspondint queries : CONSTRUCT { ?s ?p ?o . } FROM < geneid,uniprot,omim,pubmed,go> WHERE { ?s ?p ?o . ?o bif:contains "hiv" . } then SELECT * WHERE {?s ?p ?o} then SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } 2009-02-05 00:18:55.525 EST SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } 2009-02-05 00:11:56.328 EST To answer this question Bio2RDF Atlas about mouse and human genome sparql endpoint available at http://atlas.bio2rdf.org/sparql is searched. The selected URIs are then loaded into your local Virtuoso triplestore at http://localhost:8890/sparql. You must enable insert into the graph. Once the mashup is built, 2 sparql queries analyse the obtained graph. Finaly you can submit queries to the RDF mashup about HIV as you like. This is the corresponding queries : CONSTRUCT { ?s ?p ?o . } FROM < geneid,uniprot,omim,pubmed,go> WHERE { ?s ?p ?o . ?o bif:contains "hiv" . } then SELECT * WHERE {?s ?p ?o} then SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } 2009-02-05 00:21:25.340 EST Francois Belleau 2009-02-05 00:10:57.151 EST SELECT * FROM < geneid,uniprot,omim,pubmed,go> WHERE { ?s ?p ?o . ?o bif:contains "hiv" . } then SELECT * WHERE {?s ?p ?o} then SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } then 2009-02-05 00:14:39.106 EST What is known about HIV ? 2009-02-05 00:19:13.744 EST To answer this question Bio2RDF Atlas about mouse and human genome sparql endpoint available at http://atlas.bio2rdf.org/sparql is searched. The selected URIs are then loaded into your local Virtuoso triplestore at http://localhost:8890/sparql. You must enable insert mode into the graph. Once the mashup is built, 2 SPARQL queries analyze the obtained graph. Finally you can submit queries to the RDF mashup about HIV as you like. This is the queries present in this workflow : CONSTRUCT { ?s ?p ?o . } FROM < geneid,uniprot,omim,pubmed,go> WHERE { ?s ?p ?o . ?o bif:contains "hiv" . } then SELECT * WHERE {?s ?p ?o} then SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } 2009-02-05 00:23:55.571 EST SELECT * FROM < geneid,uniprot,omim,pubmed,go> WHERE { ?s ?p ?o . ?o bif:contains "hiv" . } then SELECT ?type, count(*) WHERE { ?s <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> ?type . } then 2009-02-05 00:14:22.172 EST dataflow0limit00term00namespace00bmurisSearch_Atlasnamespace0limit0term0sparql_endpoint0sparql_xml00net.sf.taverna.t2.activitiesbeanshell-activity0.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity workflow java.lang.String true sparql_endpoint 0 text/plain java.lang.String true term 0 text/plain java.lang.String true namespace 0 text/plain java.lang.String true limit 0 text/plain 0 sparql_xml 0 text/plain net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeFilter_list_extracting_bmurigroup0regex0stringlist1filteredlist11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true stringlist 1 l('text/plain') java.lang.String true regex 0 'text/plain' java.lang.String true group 0 'text/plain' 1 filteredlist 1 l('text/plain') net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSplit_xml_into_listregex0string0split11net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true string 0 'text/plain' java.lang.String true regex 0 'text/plain' 1 split 1 l('text/plain') net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeeolvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity \n net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeConstant_1value00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeregex_svalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity <uri>http:\/\/bio2rdf.org\/(.*)<\/uri> net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokehttp_atlas_bio2rdf_org_sparqlvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity http://atlas.bio2rdf.org/sparql net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.InvokeSearch_AtlasnamespacenamespaceSearch_AtlaslimitlimitSearch_AtlastermtermSearch_Atlassparql_endpointhttp_atlas_bio2rdf_org_sparqlvalueFilter_list_extracting_bmurigroupConstant_1valueFilter_list_extracting_bmuriregexregex_svalueFilter_list_extracting_bmuristringlistSplit_xml_into_listsplitSplit_xml_into_listregexeolvalueSplit_xml_into_liststringSearch_Atlassparql_xmlbmurisFilter_list_extracting_bmurifilteredlistdataflow0graph00bmuri00triples_insertedinsert_n3_into_graphn30port0host0graph0html00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true host 0 text/plain java.lang.String true port 0 text/plain java.lang.String true n3 0 text/plain java.lang.String true graph 0 text/plain 0 html 0 'text/plain,text/html' UserNameHere 2009-01-23 00:53:10.565 EST UserNameHere 2009-01-22 22:44:53.200 EST UserNameHere 2009-01-26 23:08:43.41 EST UserNameHere 2009-01-23 00:03:55.477 EST UserNameHere 2009-01-23 00:06:17.667 EST UserNameHere 2009-01-23 00:06:51.677 EST UserNameHere 2009-01-23 00:09:42.877 EST UserNameHere 2009-01-22 23:12:14.802 EST UserNameHere 2009-01-25 22:31:23.275 EST UserNameHere 2009-01-22 22:42:57.377 EST UserNameHere 2009-01-25 22:33:59.715 EST UserNameHere 2009-01-23 00:05:21.845 EST UserNameHere 2009-01-25 22:32:29.783 EST UserNameHere 2009-01-23 00:03:19.809 EST UserNameHere 2009-01-22 22:58:39.533 EST UserNameHere 2009-01-25 22:17:04.902 EST UserNameHere 2009-01-23 00:08:17.891 EST UserNameHere 2009-01-23 00:44:07.662 EST UserNameHere 2009-01-25 22:27:57.661 EST UserNameHere 2009-01-26 23:10:57.600 EST UserNameHere 2009-01-26 23:11:58.183 EST UserNameHere 2009-01-23 00:07:17.366 EST UserNameHere 2009-01-23 00:08:37.503 EST net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokedescribe_uribmuri0sparql_endpoint0n300net.sf.taverna.t2.activitiesbeanshell-activity0.4net.sf.taverna.t2.activities.beanshell.BeanshellActivity workflow java.lang.String true sparql_endpoint 0 text/plain java.lang.String true bmuri 0 text/plain 0 n3 0 text/plain net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeport_8890value00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity 8890 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokehost_localhostvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity localhost net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoketriples_insertedstring0bmuri0result00net.sf.taverna.t2.activitieslocalworker-activity0.4net.sf.taverna.t2.activities.localworker.LocalworkerActivity workflow java.lang.String true string 0 'text/plain' java.lang.String true bmuri 0 text/plain 0 result 0 l('text/plain') UserNameHere 2009-01-25 22:40:24.159 EST UserNameHere 2009-01-26 10:25:12.449 EST UserNameHere 2009-01-26 10:24:45.125 EST UserNameHere 2009-01-25 22:38:56.229 EST UserNameHere 2009-01-25 22:42:16.401 EST UserNameHere 2009-01-25 22:37:11.498 EST UserNameHere 2009-01-25 22:38:19.281 EST UserNameHere 2009-01-25 22:36:30.357 EST UserNameHere 2009-01-26 10:23:54.273 EST UserNameHere 2009-01-25 22:38:38.791 EST net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokehttp_atlas_bio2rdf_org_sparqlvalue00net.sf.taverna.t2.activitiesstringconstant-activity0.4net.sf.taverna.t2.activities.stringconstant.StringConstantActivity http://atlas.bio2rdf.org/sparql net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize 1 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBouncenet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failovernet.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry 1.0 1000 5000 0 net.sf.taverna.t2workflowmodel-impl0.4net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invokeinsert_n3_into_graphn3describe_urin3insert_n3_into_graphportport_8890valueinsert_n3_into_graphhosthost_localhostvalueinsert_n3_into_graphgraphgraphdescribe_uribmuribmuridescribe_urisparql_endpointhttp_atlas_bio2rdf_org_sparqlvaluetriples_insertedstringinsert_n3_into_graphhtmltriples_insertedbmuribmuritriples_insertedtriples_insertedresult