myExperiment - Workflows

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Tag: scape

Group: SCAPE

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Taverna 2

Uploader

Bolette Jurik

xcorrSound_waveform-compare_alt (1)

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xcorrSound waveform-compare Wav File Comparison. "Alt" version uses the xcorrSound Project debian package installation rather than the scape toolwrapper debian package installation.

Created: 2014-09-30 | Last updated: 2014-09-30

Taverna 2

Uploader

Bolette Jurik

Characterise_Audio_using_FFprobe (1)

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The workflow takes an inputfilepath as input parameter. It relies on FFprobe being installed locally, when it is run. It has been tested with ffprobe version 0.10.3. It outputs bitrate, bitsPerSample, channels, duration and audio sampling frequency (hz) as well as an activity report (raw FFprobe STDOUT+STDERR).

Created: 2014-09-26 | Last updated: 2014-09-26

Taverna 2

Uploader

Bolette Jurik

xcorrSound_overlap-analysis_2.0.2 (1)

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This component uses xcorrSound overlap-analsis to find the overlap between two input wav files and output an analysis report in a txt output format.

Created: 2014-09-26 | Last updated: 2014-09-26

Taverna 2

Uploader

Bolette Jurik

Workflow_waveform-compare_2.0.2 (2)

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xcorrSound waveform-compare component - minor edits

Created: 2014-09-25 | Last updated: 2014-09-26

Taverna 2

Uploader

Donal Fellows

myExperiment Group Activity Report (1)

Prepares a report (three CSV files) on the activity of a group on myExperiment.

Created: 2014-08-26

Credits: Donal Fellows

Taverna 2

Uploader

Sven

TIF to JP2 file format migration with qual... (1)

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This workflow reads a textfile containing absolute paths to TIF image files and converts them to JP2 image files using OpenJPEG (https://code.google.com/p/openjpeg). Based on the input text file, the workflow creates a Taverna list to be processed file by file. A temporary directory is created (createtmpdir) where the migrated image files and some temporary tool outputs are stored. Before starting the actual migration, it is checked if the TIF input images are valid file format instances u...

Created: 2014-05-07 | Last updated: 2014-05-07

Credits: Sven

Taverna 2

Uploader

Sven

ToMaR HDFS Input Directory Processing (2)

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This workflow allows processing an HDFS input directory using ToMaR. The "hdfs_working_dir" input port is the HDFS input directory which containes the data to be processed by ToMaR. The "toolspec" input port contains the toolspec XML describing operations that can be used (see "operation" input port). The "operation" input port defines the operation to be used in the current ToMaR job execution (see "toolspec" input port, an operation port used here must be defined in the tool specificatio...

Created: 2014-03-04 | Last updated: 2014-03-11

Credits: Sven

Taverna 2

Uploader

Bolette Jurik

Slim Migrate And QA mp3 to Wav Using Hadoo... (4)

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This workflow migrates an input list (available on HDFS) of mp3 files (available on NFS) to wav files (in output directory on NFS) using an ffmpeg Hadoop job. The workflow then compares content of the original mp3 and the migrated wav by first converting the two files to wav using an mpg123 Hadoop job and the identity function respectively, and then using an xcorrSound waveform-compare Hadoop job. The needed Hadoop jobs are available from https://github.com/statsbiblioteket/scape-audio-qa-ex...

Created: 2014-02-21 | Last updated: 2014-06-30

Taverna 2

Uploader

Donal Fellows

SCAPE Assess Metrics (1)

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Assesses whether a set of metrics satisfy some provided Quality Level Definition (QLD). The QLD is given as a Schematron schema, and is evaluated by the Java tool library Jing. Jing (http://www.thaiopensource.com/relaxng/jing.html) is assumed to be installed in the current directory.

Created: 2013-08-22 | Last updated: 2013-08-22

Taverna 2

Uploader

Bolette Jurik

Validate_Compare_Compare_List (1)

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QA for file migrated to wav. The QA steps include File Format Validation, Significant Property Comparison and xcorrSound waveform-compare file content comparison (all CLI). Input the migrated wav and a "compare-to-wav" file.

Created: 2013-04-15

Credits: Bolette Jurik

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