Pack: Supporting material for Roos et al., BMC Bioinformatics, SWAT4LS supplement (2009)

Created: 2009-05-15 15:45:32      Last updated: 2011-08-11 10:01:23
Information Live view

Title: Supporting material for Roos et al., BMC Bioinformatics, SWAT4LS supplement (2009)

Information Description

Supporting material for BMC Bioinformatics, supplement for Semantic Web Applications and Tools for Life Science (2009)

Structuring and extracting knowledge for the support of hypothesis generation in molecular biology

Marco Roos, M. Scott Marshall, Andrew P. Gibson, Martijn Schuemie, Edgar Meij, Sophia Katrenko, Willem Robert van Hage, Konstantinos Krommydas, Pieter W. Adriaans


We thank the myGrid team and OMII-UK for their support in applying their e-Science tools, and Machiel Jansen for his contribution to the early development of AIDA. This work was carried out in the context of the Virtual Laboratory for e-Science program (VL-e) and the BioRange program. These programs are supported by BSIK grants from the Dutch Ministry of Education, Culture and Science (OC&W). Special thanks go to Bob Hertzberger who made the VL-e project a reality.

Subscribe to RSS feed for items in this pack feed Download Information Items (5)

  • Internal item

    Pack: AIDA toolbox (Marco Roos)


    The AIDA toolbox for knowledge management and knowledge extraction in a service oriented architecture.

    Added by Marco Roos ... more than 1 year ago (2009-05-15 16:05:47)


  • Item unavailable to view

    You are not authorised to view the item this entry points to.

    Added by Marco Roos ... more than 1 year ago (2009-05-15 18:46:02)

  • Internal item

    Workflow: BioAID_EnirchBioModelWithProteinsFromText (Marco Roos)


    Workflow to extract protein names from medline and enrich BioAID proto-ontologies with the text mining results after conversion to RDF triples. Note that this workflow was made for demonstration purposes, not for concurrent use by multiple users. If you are interested in using this workflow, we would appreciate it if you would contact us such that we can collaborate.

    Added by Marco Roos ... more than 1 year ago (2009-05-15 16:13:43)


  • External item

    External: Link - (


    BioMed Central back reference

    Added by Marco Roos ... more than 1 year ago (2010-03-23 19:07:19)

  • External item

    External: RDF triple store with results from the BioAID workflow used in the publication for BMC Bioinformatics SWAT4LS special issue - (

    Alternate link


    RDF triple store with results from BioAID workflow for BMC Bioinformatics publication. The store is in fact a Sesame RDF repository. Because the triples are stored on disk for safety reasons, performance could be compromised.

    Added by Marco Roos ... more than 1 year ago (2009-05-15 20:15:26)

Information Relationships (0)

There are no relationships.

Information Download

Information Creator

5 items in this pack

Information License

All versions of this Pack are not licensed.

Information Tags (7)

Log in to add Tags

Information Featured In Packs (0)


Log in to add to one of your Packs

Information Favourited By (0)

No one

Information Statistics

2787 viewings


[ see breakdown ]


Comments Comments (0)

No comments yet

Log in to make a comment

What is this?

Linked Data

Non-Information Resource URI:

Alternative Formats