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Items tagged with "encoding" (1)

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Workflows (1)

Taverna 2

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Team A

Antibiotic resistance profiling (1)

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A workflow that takes a user defined genomic sequence and queries a third party database of genes encoding antibiotic resistance through a BLAST search for matching sequences. The accession IDs from the matches are extracted and the Entrez webservice is used to retrieve genbank records for the antibiotic resistance genes found. A python script is essential in the functioning of this workflow and this can be found at www.bioinformatix.co.uk along with a user and maintenance manual whic...

Created: 2013-03-08

Credits: Team A

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Non-Information Resource URI: http://www.myexperiment.org/tags/2179

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